BLASTX nr result

ID: Coptis24_contig00000895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000895
         (1869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar]                  803   0.0  
ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi...   802   0.0  
ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein M...   799   0.0  
ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein M...   799   0.0  
ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein M...   796   0.0  

>gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar]
          Length = 468

 Score =  803 bits (2075), Expect = 0.0
 Identities = 383/468 (81%), Positives = 410/468 (87%), Gaps = 7/468 (1%)
 Frame = +3

Query: 75   MRERGKAGKPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLETATYKNRQRLY 254
            M+ERGKAG+ SVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQ+E ATYKNRQRLY
Sbjct: 1    MKERGKAGQRSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQVEHATYKNRQRLY 60

Query: 255  LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE 434
            LSEQTDGSVPNTLVIANC+VVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
Sbjct: 61   LSEQTDGSVPNTLVIANCDVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE 120

Query: 435  LPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTE 614
            LPQNSKIV THTDSPDVLIWDVESQPNRHAVLGAA SRPDL+LTGHQ+NAEFAL+MCP E
Sbjct: 121  LPQNSKIVGTHTDSPDVLIWDVESQPNRHAVLGAAPSRPDLVLTGHQENAEFALSMCPIE 180

Query: 615  PFVLSGGKDKSVVLWSIHDHISA-------SATDXXXXXXXXXXXXXXXXXXXXXXXXVG 773
            P VLSGGKD SVVLWSI DHIS         + +                        + 
Sbjct: 181  PLVLSGGKDMSVVLWSIQDHISTLGVASDVKSLEASSGSSGGKQAAKAGNNKASDSPTLA 240

Query: 774  PRGIYQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPAVKVEKAHNADLHCV 953
            PRG+YQGH+DTVEDVQFCPSSA+EFCSVGDDSCLILWDAR+GT+P VKVEKAHN DLHCV
Sbjct: 241  PRGVYQGHEDTVEDVQFCPSSAEEFCSVGDDSCLILWDARSGTSPVVKVEKAHNEDLHCV 300

Query: 954  DWNPHDEHLILTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAVLCVQWSPDVATVFG 1133
            DWNPHD + ILTGSADNSVRMFDRRNL+SGGVGSPV KFEGH AAVLCVQWSPD A+VFG
Sbjct: 301  DWNPHDVNYILTGSADNSVRMFDRRNLSSGGVGSPVHKFEGHSAAVLCVQWSPDKASVFG 360

Query: 1134 SAADDGLLNVWDYDKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKVVDFHWNAADPWTIVS 1313
            SAA+DG LNVWDY+K+GKK++R GTR  NSPPGLFFQH GHRDKVVDFHWNA+DPWTIVS
Sbjct: 361  SAAEDGFLNVWDYEKVGKKRERTGTRTTNSPPGLFFQHAGHRDKVVDFHWNASDPWTIVS 420

Query: 1314 VSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELENFKSHILTCSSKS 1457
            VSDDC+STGGGGTLQIWRMSDLIYRPEEEVL ELE FKSHILTC+ K+
Sbjct: 421  VSDDCQSTGGGGTLQIWRMSDLIYRPEEEVLEELEKFKSHILTCAPKT 468


>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
            gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 503

 Score =  802 bits (2071), Expect = 0.0
 Identities = 385/485 (79%), Positives = 423/485 (87%), Gaps = 8/485 (1%)
 Frame = +3

Query: 27   EKQRELSES*RHEKEKMRERGKAGKP---SVDERYTQWKSLVPVLYDWLANHNLVWPSLS 197
            +K ++  +  +    KM+E  K+ +    +VDE+YTQWKSLVPVLYDWLANHNLVWPSLS
Sbjct: 20   DKDQQQQQQQQSAGSKMKEGKKSQQQQQHTVDEKYTQWKSLVPVLYDWLANHNLVWPSLS 79

Query: 198  CRWGPQLETATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSP 377
            CRWGPQLE ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHI+QFNEEARSP
Sbjct: 80   CRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIAQFNEEARSP 139

Query: 378  FVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGAADSRPDL 557
            FVKK+KTIIHPGEVNRIRELPQNS+IVATHTD PDVLIWDVE+QPNRHAVLGA +SRPDL
Sbjct: 140  FVKKYKTIIHPGEVNRIRELPQNSRIVATHTDGPDVLIWDVEAQPNRHAVLGATNSRPDL 199

Query: 558  ILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASATDXXXXXXXXXXXXXX 737
            ILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSI DHI+ASATD              
Sbjct: 200  ILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITASATDPATAKSPGSGGSII 259

Query: 738  XXXXXXXXXX-----VGPRGIYQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARAGT 902
                           VGPRGIYQGH+DTVEDV FCPSSAQEFCSVGDDSCLILWDAR G+
Sbjct: 260  KRAGEGNDRAAESPSVGPRGIYQGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARIGS 319

Query: 903  TPAVKVEKAHNADLHCVDWNPHDEHLILTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHK 1082
            +PAVKVEKAHNADLHCVDWNPHD +LI+TGSADNSVRMFDRRNLTS GVG+PV+KFEGHK
Sbjct: 320  SPAVKVEKAHNADLHCVDWNPHDNNLIITGSADNSVRMFDRRNLTSNGVGTPVYKFEGHK 379

Query: 1083 AAVLCVQWSPDVATVFGSAADDGLLNVWDYDKIGKKKDRVGTRMPNSPPGLFFQHGGHRD 1262
            AAVLCVQWSPD ++VFGS+A+DGLLN+WDYDK+GKK +R  TR PNSP GLFFQH GHRD
Sbjct: 380  AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTER-ATRAPNSPAGLFFQHAGHRD 438

Query: 1263 KVVDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELENFKSHILT 1442
            KVVDFHWNA+DPWTIVSVSDDC++TGGGGTLQIWRMSDLIYRPE+EVLAELE FKSH++ 
Sbjct: 439  KVVDFHWNASDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIE 498

Query: 1443 CSSKS 1457
            C+SK+
Sbjct: 499  CTSKA 503


>ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
          Length = 508

 Score =  799 bits (2064), Expect = 0.0
 Identities = 380/482 (78%), Positives = 424/482 (87%), Gaps = 2/482 (0%)
 Frame = +3

Query: 18   EEGEKQRELSES*RHEKEKMRERGKAGKPSVDERYTQWKSLVPVLYDWLANHNLVWPSLS 197
            E  +  +E  ++ + + ++ +++ +  +PSVDE+YTQWKSLVPVLYDWLANHNLVWPSLS
Sbjct: 26   EHAKALKEGRKTQQQQHDQQQQQQQQHQPSVDEKYTQWKSLVPVLYDWLANHNLVWPSLS 85

Query: 198  CRWGPQLETATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSP 377
            CRWGPQLE ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSP
Sbjct: 86   CRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSP 145

Query: 378  FVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGAADSRPDL 557
            FVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPDVL+WDVESQPNRHAVLGA +SRPDL
Sbjct: 146  FVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLVWDVESQPNRHAVLGATNSRPDL 205

Query: 558  ILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASATD--XXXXXXXXXXXX 731
            ILTGHQDNAEFALAMCPTEP+VLSGGKDK+VVLWSI DHI+++ATD              
Sbjct: 206  ILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHITSAATDSKSGGSIIKQNSKS 265

Query: 732  XXXXXXXXXXXXVGPRGIYQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTPA 911
                        VGPRGIY GH+DTVEDV FCPSSAQEFCSVGDDSCLILWDAR G++P 
Sbjct: 266  GEGNDKTADGPTVGPRGIYCGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGSSPV 325

Query: 912  VKVEKAHNADLHCVDWNPHDEHLILTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAAV 1091
            VKVEKAHNADLHCVDWNPHD++LILTGSADNSVRMFDRRNLT+ GVGSP+ KFEGHKAAV
Sbjct: 326  VKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTTNGVGSPIHKFEGHKAAV 385

Query: 1092 LCVQWSPDVATVFGSAADDGLLNVWDYDKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKVV 1271
            LCVQWSPD ++VFGS+A+DGLLN+WDY+K+GKK +R G  + +SPPGLFFQH GHRDKVV
Sbjct: 386  LCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERTGKSI-SSPPGLFFQHAGHRDKVV 444

Query: 1272 DFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELENFKSHILTCSS 1451
            DFHWNA DPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPE+EVLAELE FKSH++ C+S
Sbjct: 445  DFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVVACAS 504

Query: 1452 KS 1457
            K+
Sbjct: 505  KT 506


>ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein MSI4-like isoform 1
            [Glycine max]
          Length = 513

 Score =  799 bits (2064), Expect = 0.0
 Identities = 381/483 (78%), Positives = 424/483 (87%), Gaps = 2/483 (0%)
 Frame = +3

Query: 15   VEEGEKQRELSES*RHEKEKMRERGKAGKPSVDERYTQWKSLVPVLYDWLANHNLVWPSL 194
            ++EG K ++  +  + +    +++ +  +PSVDE+YTQWKSLVPVLYDWLANHNLVWPSL
Sbjct: 31   LKEGRKTQQQQQQ-QQQHHHQQQQQQQDQPSVDEKYTQWKSLVPVLYDWLANHNLVWPSL 89

Query: 195  SCRWGPQLETATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARS 374
            SCRWGPQLE ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARS
Sbjct: 90   SCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARS 149

Query: 375  PFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGAADSRPD 554
            PFVKK+KTIIHPGEVNRIRELPQNSKIVATHTDSPDVL+WDVESQPNRHAVLGA +SRPD
Sbjct: 150  PFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLVWDVESQPNRHAVLGATNSRPD 209

Query: 555  LILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASATD--XXXXXXXXXXX 728
            LILTGHQDNAEFALAMCPTEP+VLSGGKDK+VVLWSI DHI+++ATD             
Sbjct: 210  LILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHITSAATDSKSGGSIIKQNSK 269

Query: 729  XXXXXXXXXXXXXVGPRGIYQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARAGTTP 908
                         VGPRGIY GH+DTVEDV FCPSSAQEFCSVGDDSCLILWDAR G++P
Sbjct: 270  SGEGNDKTADGPTVGPRGIYCGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWDARVGSSP 329

Query: 909  AVKVEKAHNADLHCVDWNPHDEHLILTGSADNSVRMFDRRNLTSGGVGSPVFKFEGHKAA 1088
             VKVEKAHNADLHCVDWNPHD++LILTGSADNSVRMFDRRNLT+ GVGSP+ KFEGHKAA
Sbjct: 330  VVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTTNGVGSPIHKFEGHKAA 389

Query: 1089 VLCVQWSPDVATVFGSAADDGLLNVWDYDKIGKKKDRVGTRMPNSPPGLFFQHGGHRDKV 1268
            VLCVQWSPD ++VFGS+A+DGLLN+WDY+K+GKK +R G  + +SPPGLFFQH GHRDKV
Sbjct: 390  VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERSGKSI-SSPPGLFFQHAGHRDKV 448

Query: 1269 VDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELENFKSHILTCS 1448
            VDFHWNA DPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPE+EVLAELE FKSH++ C+
Sbjct: 449  VDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVVACA 508

Query: 1449 SKS 1457
            SK+
Sbjct: 509  SKT 511


>ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
            sativus]
          Length = 518

 Score =  796 bits (2057), Expect = 0.0
 Identities = 381/490 (77%), Positives = 423/490 (86%), Gaps = 6/490 (1%)
 Frame = +3

Query: 3    VKCLVEEGEKQRELSES*RHEKEKMRERGKAGK-PSVDERYTQWKSLVPVLYDWLANHNL 179
            VK     G K +   E    + E++ ++ KA + PSVDERYTQWKSLVPVLYDW ANHNL
Sbjct: 32   VKKKETRGRKPKPKDEK---KDEQLTKKMKAQQQPSVDERYTQWKSLVPVLYDWFANHNL 88

Query: 180  VWPSLSCRWGPQLETATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN 359
            VWPSLSCRWGPQLE ATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN
Sbjct: 89   VWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN 148

Query: 360  EEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGAA 539
            EEARSPFVKK+KTIIHPGEVNRIRELPQNS+IVATHTDSPDVLIWDVE+QPNRHAVLGA 
Sbjct: 149  EEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDSPDVLIWDVEAQPNRHAVLGAT 208

Query: 540  DSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIHDHISASATDXXXXXXXX 719
            +SRPDLILTGHQ+NAEFALAMCPTEP+VLSGGKDK VVLWSI DHI+ SATD        
Sbjct: 209  NSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSATDAGASKSPG 268

Query: 720  XXXXXXXXXXXXXXXX-----VGPRGIYQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILW 884
                                 +GPRG+Y GH+DTVEDV FCPS+AQEFCSVGDDSCLILW
Sbjct: 269  SGGSIIKKPGEANDKASDGPSIGPRGVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILW 328

Query: 885  DARAGTTPAVKVEKAHNADLHCVDWNPHDEHLILTGSADNSVRMFDRRNLTSGGVGSPVF 1064
            DAR G++PAVKVEKAHNADLHCVDWNPHD++LI+TGSADNS+R+FDRRNLTS GVGSP++
Sbjct: 329  DARTGSSPAVKVEKAHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIY 388

Query: 1065 KFEGHKAAVLCVQWSPDVATVFGSAADDGLLNVWDYDKIGKKKDRVGTRMPNSPPGLFFQ 1244
            KFEGHKAAVLCVQWSPD ++VFGS+A+DGLLN+WDYDK+GKK +R  TR P +PPGLFFQ
Sbjct: 389  KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTER-ATRTPAAPPGLFFQ 447

Query: 1245 HGGHRDKVVDFHWNAADPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELENF 1424
            H GHRDKVVDFHWNAADPWT+VSVSDDC++TGGGGTLQIWRMSDLIYRPEEEVLAELE F
Sbjct: 448  HAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEEEVLAELEKF 507

Query: 1425 KSHILTCSSK 1454
            KSH++ C++K
Sbjct: 508  KSHVIECAAK 517


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