BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000882
         (1961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi...   271   4e-70
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1...   263   1e-67
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...   262   3e-67
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   248   3e-63
ref|XP_002886593.1| pentatricopeptide repeat-containing protein ...   243   1e-61

>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
            [Vitis vinifera]
          Length = 489

 Score =  271 bits (694), Expect = 4e-70
 Identities = 134/189 (70%), Positives = 151/189 (79%)
 Frame = -1

Query: 1961 YLNMIQVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAKESLLEKAETLKERAR 1782
            YLNMIQVLVNLKD+PGAEKCFREWES  S YDIR+ANALIGAYAK+ LLEKAE LKE AR
Sbjct: 301  YLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHAR 360

Query: 1781 RSGAKPNVKTWEIFMDYHLKKRNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFE 1602
            R GAKPN KTWEIF+ YHLK R    AVDCV NAIS GRGDG+KWVP   ++   M HFE
Sbjct: 361  RRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFE 420

Query: 1601 QARDVEGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLLRRLKMENVDVSEAAK 1422
            Q +DV+GAE FLE LK   +  G +VFESLIR YAAAG+TSP + RRLKMENV+VS++ K
Sbjct: 421  QEKDVDGAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCK 480

Query: 1421 KLLEVVCVD 1395
            KLLE V V+
Sbjct: 481  KLLEEVSVE 489


>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
            unknown [Populus trichocarpa] gi|222873242|gb|EEF10373.1|
            predicted protein [Populus trichocarpa]
          Length = 490

 Score =  263 bits (673), Expect = 1e-67
 Identities = 128/189 (67%), Positives = 152/189 (80%)
 Frame = -1

Query: 1961 YLNMIQVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAKESLLEKAETLKERAR 1782
            YLNMIQVLVNLKDVPGAEKCFREWES  STYDIR+AN +I AYAKE L++KAE LKERAR
Sbjct: 302  YLNMIQVLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERAR 361

Query: 1781 RSGAKPNVKTWEIFMDYHLKKRNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFE 1602
            R GAKPN KTWEIF DY+LK  +  L VDC+ NA+S GRG+G+KWVP   +V +LM+HFE
Sbjct: 362  RRGAKPNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFE 421

Query: 1601 QARDVEGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLLRRLKMENVDVSEAAK 1422
            Q +DV+GAE  +E LKK  D    +VFESLIRTYAAAG+ S  + RRLKMENV+VS+  +
Sbjct: 422  QQKDVDGAEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQ 481

Query: 1421 KLLEVVCVD 1395
            KLLE +CV+
Sbjct: 482  KLLEAICVE 490


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score =  262 bits (669), Expect = 3e-67
 Identities = 130/189 (68%), Positives = 153/189 (80%)
 Frame = -1

Query: 1961 YLNMIQVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAKESLLEKAETLKERAR 1782
            YLNMIQVLVNLKD+PGAEKCFREWES  S YDIR+AN LI AYAK+ LLEKAE LKERA 
Sbjct: 302  YLNMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAI 361

Query: 1781 RSGAKPNVKTWEIFMDYHLKKRNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFE 1602
              GAKPN KTWEIF DY+ +  +  L+V+C+ NAIS GRGDG+KW+P   VV + M+HFE
Sbjct: 362  GRGAKPNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFE 421

Query: 1601 QARDVEGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLLRRLKMENVDVSEAAK 1422
            Q +DV+GAE F+E LKK  D   A+VFESLIRTYAAAG+TS  L RRLKMENV+VSEA +
Sbjct: 422  QQKDVDGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAGQ 481

Query: 1421 KLLEVVCVD 1395
            KLLE++CV+
Sbjct: 482  KLLEMICVE 490


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Glycine max]
          Length = 490

 Score =  248 bits (634), Expect = 3e-63
 Identities = 125/189 (66%), Positives = 147/189 (77%)
 Frame = -1

Query: 1961 YLNMIQVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAKESLLEKAETLKERAR 1782
            YLNMIQVLVNLKD+PGAEKCFREWE    TYDIR+AN LI AY K  +LEKAE LKERAR
Sbjct: 302  YLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERAR 361

Query: 1781 RSGAKPNVKTWEIFMDYHLKKRNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFE 1602
            R GAKPN KT EIFMDY+L K +  LAVD +  AIS+GRG+G KWVP   ++  +M HFE
Sbjct: 362  RRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFE 421

Query: 1601 QARDVEGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLLRRLKMENVDVSEAAK 1422
            Q +DV+GAE FLE LKK  +  G +VFESLIRTYAAAG+ S ++ RRLKMENV+VSE  +
Sbjct: 422  QEKDVDGAEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGTQ 481

Query: 1421 KLLEVVCVD 1395
            KLLE + V+
Sbjct: 482  KLLEAISVE 490


>ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332434|gb|EFH62852.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 491

 Score =  243 bits (621), Expect = 1e-61
 Identities = 118/186 (63%), Positives = 148/186 (79%)
 Frame = -1

Query: 1961 YLNMIQVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAKESLLEKAETLKERAR 1782
            YLNMIQVLV L D+PGAE  F+EW++  STYDIRI N LIGAYAKE L+EKA+ LKE+A 
Sbjct: 302  YLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAP 361

Query: 1781 RSGAKPNVKTWEIFMDYHLKKRNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFE 1602
            R G K N KTWEIFMDY++K  + + A++C++ A+SIG+GDG KW+P Q  V+TLMS+FE
Sbjct: 362  RRGGKANAKTWEIFMDYYVKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFE 421

Query: 1601 QARDVEGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLLRRLKMENVDVSEAAK 1422
            Q +DV GAE+ LE LK   D  GA++FESLIRTYAAAGK+ P++ RRLKMENV+V+E  K
Sbjct: 422  QKKDVNGAENLLEILKNGTDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVNEVTK 481

Query: 1421 KLLEVV 1404
            KLL+ V
Sbjct: 482  KLLDEV 487