BLASTX nr result
ID: Coptis24_contig00000879
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000879 (1046 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 ... 476 e-132 emb|CBI22790.3| unnamed protein product [Vitis vinifera] 476 e-132 ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative... 468 e-130 gb|ABK92490.1| unknown [Populus trichocarpa] 467 e-129 ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|2... 466 e-129 >ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 homolog [Vitis vinifera] Length = 260 Score = 476 bits (1225), Expect = e-132 Identities = 227/259 (87%), Positives = 250/259 (96%) Frame = +3 Query: 54 PQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQM 233 PQGDYI+LHRKR+GYRPDHFERKRK++AREVH+ S AQK +G KGK +AK+RYAEKAQM Sbjct: 2 PQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQM 61 Query: 234 KRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVPL 413 K+TLAMHEESSSRRKVDD+VH+GA+PAYLLDRE TTRAKVLSN+IKQKRKEKAGKW+VPL Sbjct: 62 KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVPL 121 Query: 414 PKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKA 593 PKVRPVAEDEMFKV+RTG+RK+KQWKRMVTK TFVGP+FTRKPPKYERFIRP+GLRF+KA Sbjct: 122 PKVRPVAEDEMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTKA 181 Query: 594 HVTHPELKCTFNLEIIGIKKNPNGNMYTSLGVVTRGTIIEVNVSELGLVTPAGKVVWGKY 773 HVTHPELKCTFNLEIIG+KKNPNG MYTSLGV+T+GTIIEVNVSELGLVTPAGKVVWGKY Sbjct: 182 HVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEVNVSELGLVTPAGKVVWGKY 241 Query: 774 AQVTNNPENDGCINAVLLV 830 AQVTNNPENDGCINAVLLV Sbjct: 242 AQVTNNPENDGCINAVLLV 260 >emb|CBI22790.3| unnamed protein product [Vitis vinifera] Length = 280 Score = 476 bits (1225), Expect = e-132 Identities = 227/259 (87%), Positives = 250/259 (96%) Frame = +3 Query: 54 PQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQM 233 PQGDYI+LHRKR+GYRPDHFERKRK++AREVH+ S AQK +G KGK +AK+RYAEKAQM Sbjct: 22 PQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQM 81 Query: 234 KRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVPL 413 K+TLAMHEESSSRRKVDD+VH+GA+PAYLLDRE TTRAKVLSN+IKQKRKEKAGKW+VPL Sbjct: 82 KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVPL 141 Query: 414 PKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKA 593 PKVRPVAEDEMFKV+RTG+RK+KQWKRMVTK TFVGP+FTRKPPKYERFIRP+GLRF+KA Sbjct: 142 PKVRPVAEDEMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTKA 201 Query: 594 HVTHPELKCTFNLEIIGIKKNPNGNMYTSLGVVTRGTIIEVNVSELGLVTPAGKVVWGKY 773 HVTHPELKCTFNLEIIG+KKNPNG MYTSLGV+T+GTIIEVNVSELGLVTPAGKVVWGKY Sbjct: 202 HVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEVNVSELGLVTPAGKVVWGKY 261 Query: 774 AQVTNNPENDGCINAVLLV 830 AQVTNNPENDGCINAVLLV Sbjct: 262 AQVTNNPENDGCINAVLLV 280 >ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative [Ricinus communis] gi|223526141|gb|EEF28481.1| TGF-beta-inducible nuclear protein, putative [Ricinus communis] Length = 260 Score = 468 bits (1205), Expect = e-130 Identities = 222/259 (85%), Positives = 248/259 (95%) Frame = +3 Query: 54 PQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQM 233 PQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQKT+G KGK AK+ YAEKA M Sbjct: 2 PQGDYIELHRKRHGYRLDHFERKRKKEAREVHKRSERAQKTLGIKGKMIAKKNYAEKALM 61 Query: 234 KRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVPL 413 K+TLAMHEESSSRRKVDD+VH+GA+PAYLLDRE TTRAK+LSN++KQKRKEKAGKW+VPL Sbjct: 62 KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRENTTRAKILSNTVKQKRKEKAGKWEVPL 121 Query: 414 PKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKA 593 PKVRPVAEDEMFKV+R+G+R++KQWKRMVTKVTFVGP FTRKPPKYERFIRP+GLRF+KA Sbjct: 122 PKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKVTFVGPGFTRKPPKYERFIRPSGLRFTKA 181 Query: 594 HVTHPELKCTFNLEIIGIKKNPNGNMYTSLGVVTRGTIIEVNVSELGLVTPAGKVVWGKY 773 HVTHPELKCTFNLEIIG+KKNPNG MYTSLGV+T+G+IIEVNVSELGLVTPAGKVVWGKY Sbjct: 182 HVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGSIIEVNVSELGLVTPAGKVVWGKY 241 Query: 774 AQVTNNPENDGCINAVLLV 830 AQVTNNPENDGCINAVLLV Sbjct: 242 AQVTNNPENDGCINAVLLV 260 >gb|ABK92490.1| unknown [Populus trichocarpa] Length = 260 Score = 467 bits (1201), Expect = e-129 Identities = 223/259 (86%), Positives = 244/259 (94%) Frame = +3 Query: 54 PQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQM 233 PQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQK +G KGK AK+ YAEKA M Sbjct: 2 PQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKALM 61 Query: 234 KRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVPL 413 K+TLAMHEES+SRRKVDD+VH GA+PAYLLDRE TTRAK+LSNSIKQKRKEKAGKW+VPL Sbjct: 62 KKTLAMHEESTSRRKVDDDVHDGAIPAYLLDRENTTRAKILSNSIKQKRKEKAGKWEVPL 121 Query: 414 PKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKA 593 PKVRPVAEDEMFKV+R+G+RK+KQWKRMVTK TFVGP FTRKPPKYERFIRPTGLRF+KA Sbjct: 122 PKVRPVAEDEMFKVIRSGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKA 181 Query: 594 HVTHPELKCTFNLEIIGIKKNPNGNMYTSLGVVTRGTIIEVNVSELGLVTPAGKVVWGKY 773 HVTHPELKCTFNLEIIG+KKNPNG YTSLGV+T+GTIIEVNVSELGLVTPAGKVVWGKY Sbjct: 182 HVTHPELKCTFNLEIIGVKKNPNGPTYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKY 241 Query: 774 AQVTNNPENDGCINAVLLV 830 AQVTNNPENDGCINAVLLV Sbjct: 242 AQVTNNPENDGCINAVLLV 260 >ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|222868017|gb|EEF05148.1| predicted protein [Populus trichocarpa] Length = 260 Score = 466 bits (1200), Expect = e-129 Identities = 223/259 (86%), Positives = 244/259 (94%) Frame = +3 Query: 54 PQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQM 233 PQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQK +G KGK AK+ YAEKA M Sbjct: 2 PQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKALM 61 Query: 234 KRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVPL 413 K+TLAMHEES+SRRKVDD+VH GA+PAYLLDRE TTRAK+LSNSIKQKRKEKAGKW+VPL Sbjct: 62 KKTLAMHEESTSRRKVDDDVHDGAVPAYLLDRENTTRAKILSNSIKQKRKEKAGKWEVPL 121 Query: 414 PKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKA 593 PKVRPVAEDEMFKV+R+G+RK+KQWKRMVTK TFVGP FTRKPPKYERFIRPTGLRF+KA Sbjct: 122 PKVRPVAEDEMFKVIRSGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKA 181 Query: 594 HVTHPELKCTFNLEIIGIKKNPNGNMYTSLGVVTRGTIIEVNVSELGLVTPAGKVVWGKY 773 HVTHPELKCTFNLEIIG+KKNPNG YTSLGV+T+GTIIEVNVSELGLVTPAGKVVWGKY Sbjct: 182 HVTHPELKCTFNLEIIGVKKNPNGPTYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKY 241 Query: 774 AQVTNNPENDGCINAVLLV 830 AQVTNNPENDGCINAVLLV Sbjct: 242 AQVTNNPENDGCINAVLLV 260