BLASTX nr result

ID: Coptis24_contig00000870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000870
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634633.1| PREDICTED: transcription factor TGA4-like [V...   184   8e-44
ref|XP_002537773.1| conserved hypothetical protein [Ricinus comm...   182   2e-43
ref|XP_004134926.1| PREDICTED: transcription factor TGA1-like [C...   154   7e-35
ref|XP_002870029.1| hypothetical protein ARALYDRAFT_329668 [Arab...   154   9e-35
emb|CAB37451.1| putative protein [Arabidopsis thaliana] gi|72686...   152   3e-34

>ref|XP_003634633.1| PREDICTED: transcription factor TGA4-like [Vitis vinifera]
          Length = 246

 Score =  184 bits (466), Expect = 8e-44
 Identities = 98/233 (42%), Positives = 144/233 (61%)
 Frame = -1

Query: 1252 FSCCFQNWMVQQEEDLTQLVQGMSQDFNKDEKLRLLVETSIKHFEEYHKKRLAYARXXXX 1073
            F CCFQ+W+ QQ +DL +L+Q +  D    + LR L++ S++HF++Y   R   ++    
Sbjct: 9    FHCCFQDWINQQHQDLQELLQVLDTDSPDSDHLRHLIQKSLQHFQDYSATRAELSKLDAP 68

Query: 1072 XXXXXXXXXXFENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGEFLQGVRKGKLSELSAE 893
                      FENS+LW+ GCRPSL IRL++++ GS +++QL +FL+G  +G L+++SA 
Sbjct: 69   SFFCPSWITSFENSFLWLGGCRPSLAIRLLYSISGSELQAQLPDFLKGCTRGNLADISAT 128

Query: 892  QLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQETAEFSDREVNGILDS 713
            QL  I  L    VR ED LS+ MASMQE+ AD  L  +  K  +   E+S R VN  +++
Sbjct: 129  QLISINALHGWIVREEDRLSSRMASMQEDTADEPLAIIAKKL-RTVGEYS-RTVNSAIET 186

Query: 712  QELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHLSIHHWCNKR 554
               A + +LE+AD LRL+T K +  IL  LQ   FL+A KKLHLS+H W  +R
Sbjct: 187  HSQALARVLEEADKLRLSTFKGLQEILTPLQGAHFLVASKKLHLSMHEWGKQR 239


>ref|XP_002537773.1| conserved hypothetical protein [Ricinus communis]
            gi|223515136|gb|EEF24610.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 255

 Score =  182 bits (462), Expect = 2e-43
 Identities = 99/250 (39%), Positives = 153/250 (61%), Gaps = 5/250 (2%)
 Frame = -1

Query: 1285 MANHEVHEQAQFSCCFQNWMVQQEEDLTQLVQGMS---QDFNKDEK--LRLLVETSIKHF 1121
            M+  +  +Q     CF +WM  QE DL +L++ ++    D   D++     L E +I+HF
Sbjct: 1    MSLEDQSDQNHSERCFHDWMNVQELDLAELLRALTLTDDDKPPDDQSLFAQLAEKNIEHF 60

Query: 1120 EEYHKKRLAYARXXXXXXXXXXXXXXFENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGE 941
            +EY  KR   A                ENS LW+AGCRPS++IRLV+ LCGS +ESQ+ E
Sbjct: 61   QEYVDKRNRLAHNDVSVYFAPTWNSALENSLLWLAGCRPSIFIRLVYALCGSQVESQIAE 120

Query: 940  FLQGVRKGKLSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQ 761
             LQG R G L +LS +QL ++  L  +T+++E+ L+T++AS+QE++AD  +  +  +  Q
Sbjct: 121  HLQGTRTGNLGDLSLQQLNMVNVLHCKTIKHEEKLTTQLASLQEDIADEPISMVAKE--Q 178

Query: 760  ETAEFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHL 581
              A  S+  V+  L + + A   +L++AD LRL TLKE+++IL  +QAV++L AG+KLHL
Sbjct: 179  SHAGDSNEVVDRALQNHDEAMVRLLQEADNLRLTTLKELISILTPVQAVDYLAAGRKLHL 238

Query: 580  SIHHWCNKRE 551
             +H W  KR+
Sbjct: 239  CMHEWGKKRD 248


>ref|XP_004134926.1| PREDICTED: transcription factor TGA1-like [Cucumis sativus]
            gi|449479532|ref|XP_004155627.1| PREDICTED: transcription
            factor TGA1-like [Cucumis sativus]
          Length = 263

 Score =  154 bits (389), Expect = 7e-35
 Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 10/249 (4%)
 Frame = -1

Query: 1264 EQAQFSCCFQNWMVQQEEDLTQLVQGMSQDFNK--------DEKLRLLVETSIKHFEEYH 1109
            +QA    CF  WM  QE+   +L Q +    N+        + +L  LV+ SI+ F++Y 
Sbjct: 9    DQAASERCFLEWMKIQEDSQKELFQALKAIENRPNSNHEETERQLTQLVDKSIEQFQDYI 68

Query: 1108 KKRLAYARXXXXXXXXXXXXXXFENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGEFLQG 929
             +R+  A+               E S LWIAGCRPS++IRL ++L G  +E+++ EFLQG
Sbjct: 69   DRRMQLAKNDVSLFFAPVWCSTREASLLWIAGCRPSVFIRLAYSLTGYELETRMAEFLQG 128

Query: 928  VRKGK--LSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQET 755
            ++  +    EL+ +Q+  ++ LQ RT++ E+ L++E+A +QEEMAD  +V +  +  +E 
Sbjct: 129  MKSMEELAGELTPQQMEQLDSLQMRTIKEEERLTSELARVQEEMADQTVVGIAMRSMKE- 187

Query: 754  AEFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHLSI 575
             E    E+   L+ Q+     ++++AD LR+ TL E+  I R LQAV FL   KKLHLSI
Sbjct: 188  -EGGSEELERALEKQDGEMVRLIQQADKLRIRTLNELTEIFRPLQAVLFLAFSKKLHLSI 246

Query: 574  HHWCNKREK 548
              W  + ++
Sbjct: 247  REWGQRSDR 255


>ref|XP_002870029.1| hypothetical protein ARALYDRAFT_329668 [Arabidopsis lyrata subsp.
            lyrata] gi|297315865|gb|EFH46288.1| hypothetical protein
            ARALYDRAFT_329668 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  154 bits (388), Expect = 9e-35
 Identities = 92/259 (35%), Positives = 139/259 (53%), Gaps = 19/259 (7%)
 Frame = -1

Query: 1243 CFQNWMVQQEEDLTQLVQGMSQDFNKDEKLRLLVETSIKHFEEYHKKRLAYARXXXXXXX 1064
            C+  WM  Q + +T+L + +S     D+KLR L+ T+IK FE+Y  KR  ++        
Sbjct: 15   CYNEWMSLQAKRMTELKEALSTGEKDDDKLRDLIRTAIKDFEDYAGKRSEHSCRFSSNYF 74

Query: 1063 XXXXXXXFENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGEFLQ---------------- 932
                    EN+ LW+ GCRPS +IRLV+ +CGS  E +L  F                  
Sbjct: 75   APKWNTCLENALLWMGGCRPSSFIRLVYAMCGSQTEHRLSNFFNNTNEDIHGLSMALGET 134

Query: 931  --GVRKGK-LSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQ 761
              G+  G+ +S+L+AEQ+  I +L  +T++ E+ L+   AS+QE+ AD  +    + + +
Sbjct: 135  RGGIGAGESMSDLTAEQIIKINELHLKTIKAENKLTKLSASLQEDTADMPIA--VAAFYK 192

Query: 760  ETAEFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHL 581
            E    +D  V   LD  E   + +L +A+ LRL TL +IV+IL   QA EFL+AGKKLHL
Sbjct: 193  EVIGQADMAVERALDKHEEDMAGLLVQAEKLRLTTLTKIVDILTAGQAAEFLLAGKKLHL 252

Query: 580  SIHHWCNKREKGASTSQGG 524
            ++H W   RE     + GG
Sbjct: 253  AMHEWGRSREHRRIEASGG 271


>emb|CAB37451.1| putative protein [Arabidopsis thaliana] gi|7268660|emb|CAB78868.1|
            putative protein [Arabidopsis thaliana]
          Length = 281

 Score =  152 bits (384), Expect = 3e-34
 Identities = 92/260 (35%), Positives = 138/260 (53%), Gaps = 20/260 (7%)
 Frame = -1

Query: 1243 CFQNWMVQQEEDLTQLVQGMSQDFNKDEKLRLLVETSIKHFEEYHKKRLAYARXXXXXXX 1064
            C+  WM  Q + +T+L + +S     D KL  L+ T+I+ F +Y +KR  ++R       
Sbjct: 15   CYNEWMSLQAKRITELKEAISTGEKDDNKLLDLIRTAIRDFGDYARKRSEHSRRFSSNYF 74

Query: 1063 XXXXXXXFENSYLWIAGCRPSLYIRLVHTLCG-------------------SNIESQLGE 941
                    EN+ LW+ GCRPS +IRLV+ +CG                   SN+   LGE
Sbjct: 75   APTWNTCLENALLWMGGCRPSSFIRLVYAMCGSQTEHRLTNFFNNTNHDIDSNLSMALGE 134

Query: 940  FLQGVRKGK-LSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYG 764
               G+  G+ +S+L+AEQL  I +L  +TV  E+ L+   AS+QE+ AD  +    + + 
Sbjct: 135  TRGGIGGGESMSDLTAEQLFKINELHLKTVEAENKLTKVSASLQEDTADTPIA--VAAFY 192

Query: 763  QETAEFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLH 584
            +E    +D  V   LD  E     +L +AD LR+ TL +IV+IL  +QA +FL+AGKKLH
Sbjct: 193  KEVIGQADVVVERALDKHEEDMGGLLVEADKLRMTTLTKIVDILTAVQAADFLLAGKKLH 252

Query: 583  LSIHHWCNKREKGASTSQGG 524
            L++H W   RE     + GG
Sbjct: 253  LAMHEWGKSREHRRLEASGG 272


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