BLASTX nr result

ID: Coptis24_contig00000867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000867
         (1653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis ...   762   0.0  
emb|CBI15634.3| unnamed protein product [Vitis vinifera]              756   0.0  
ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|2...   756   0.0  
ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar pr...   751   0.0  
ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumi...   751   0.0  

>ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis vinifera]
          Length = 558

 Score =  762 bits (1968), Expect = 0.0
 Identities = 389/479 (81%), Positives = 422/479 (88%), Gaps = 2/479 (0%)
 Frame = -1

Query: 1548 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 1369
            ALYL++ES+SGYA+F  HG+DEIGQNT+AVR S+ DL RFGKVVKL AF PF SALDALN
Sbjct: 2    ALYLLYESASGYALFLAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALN 61

Query: 1368 QINAVSEGLMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKLGSHIFEETNIPCQSNEFV 1189
            Q N+VSEGLMTDELR+FLELNLPKVKEGKK KFSLG AEPK+GSHIFE+T IPCQSNEFV
Sbjct: 62   QCNSVSEGLMTDELRSFLELNLPKVKEGKKPKFSLGTAEPKIGSHIFEDTKIPCQSNEFV 121

Query: 1188 LELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL 1009
            LELLRGVR HF RFIKDLK  D+EKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL
Sbjct: 122  LELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL 181

Query: 1008 DKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSELSEDQIPDLTEILGDE 829
            DKD+NSFSMRVREWYSWHFPELVKIVNDNYLYAKVAK+V+NK ELSED+IP LTEILGDE
Sbjct: 182  DKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFVENKLELSEDKIPGLTEILGDE 241

Query: 828  DKAKEIVEAAKASMGQDLSVIDLINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLAS 649
            DKAKEIVEAAKASMGQDLS IDLINV+QFAQRVM+L+EYRK+L+EYLV KMNDIAPNLAS
Sbjct: 242  DKAKEIVEAAKASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLAS 301

Query: 648  LIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG 469
            LIGE+VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG
Sbjct: 302  LIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG 361

Query: 468  RASQRNKGRMARFLANKCSIASRIDCFAEGSTTVFGEKLREQVEERLDFYDKGIAPRKNI 289
            RAS RNKGRMAR+LANKCSIASRIDCFAE +TTVFGEKLREQVEERL+FYDKGIAPRKNI
Sbjct: 362  RASARNKGRMARYLANKCSIASRIDCFAESNTTVFGEKLREQVEERLEFYDKGIAPRKNI 421

Query: 288  DMMKEAIENVLSEGGEKTAMDVEEAPSAXXXXXXXXXSE--TPVSDGEPNGVTNGGAMD 118
            D+MK AIE   +   E  A     A  +         +E   P+ + +P   TNG A +
Sbjct: 422  DVMKAAIEITQNNDTEDKATTEPSAKKSKKKKSKVEAAEDGEPMVEDKPTAATNGDASE 480


>emb|CBI15634.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  756 bits (1952), Expect = 0.0
 Identities = 379/428 (88%), Positives = 405/428 (94%)
 Frame = -1

Query: 1548 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 1369
            ALYL++ES+SGYA+F  HG+DEIGQNT+AVR S+ DL RFGKVVKL AF PF SALDALN
Sbjct: 2    ALYLLYESASGYALFLAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALN 61

Query: 1368 QINAVSEGLMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKLGSHIFEETNIPCQSNEFV 1189
            Q N+VSEGLMTDELR+FLELNLPKVKEGKK KFSLG AEPK+GSHIFE+T IPCQSNEFV
Sbjct: 62   QCNSVSEGLMTDELRSFLELNLPKVKEGKKPKFSLGTAEPKIGSHIFEDTKIPCQSNEFV 121

Query: 1188 LELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL 1009
            LELLRGVR HF RFIKDLK  D+EKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL
Sbjct: 122  LELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL 181

Query: 1008 DKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSELSEDQIPDLTEILGDE 829
            DKD+NSFSMRVREWYSWHFPELVKIVNDNYLYAKVAK+V+NK ELSED+IP LTEILGDE
Sbjct: 182  DKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFVENKLELSEDKIPGLTEILGDE 241

Query: 828  DKAKEIVEAAKASMGQDLSVIDLINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLAS 649
            DKAKEIVEAAKASMGQDLS IDLINV+QFAQRVM+L+EYRK+L+EYLV KMNDIAPNLAS
Sbjct: 242  DKAKEIVEAAKASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLAS 301

Query: 648  LIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG 469
            LIGE+VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG
Sbjct: 302  LIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG 361

Query: 468  RASQRNKGRMARFLANKCSIASRIDCFAEGSTTVFGEKLREQVEERLDFYDKGIAPRKNI 289
            RAS RNKGRMAR+LANKCSIASRIDCFAE +TTVFGEKLREQVEERL+FYDKGIAPRKNI
Sbjct: 362  RASARNKGRMARYLANKCSIASRIDCFAESNTTVFGEKLREQVEERLEFYDKGIAPRKNI 421

Query: 288  DMMKEAIE 265
            D+MK AIE
Sbjct: 422  DVMKAAIE 429


>ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|222859388|gb|EEE96935.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score =  756 bits (1951), Expect = 0.0
 Identities = 387/481 (80%), Positives = 428/481 (88%), Gaps = 4/481 (0%)
 Frame = -1

Query: 1548 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 1369
            AL+L++E+SSGY++F  +G+DEIGQNT+AVR S+ DL RFGKVV+L AF PF SALDALN
Sbjct: 2    ALFLLYETSSGYSLFVANGLDEIGQNTEAVRNSVSDLNRFGKVVQLTAFHPFESALDALN 61

Query: 1368 QINAVSEGLMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKLGSHIFEETNIPCQSNEFV 1189
            Q N+VSEG+MTDELRNFLELNLPKVKEGKKAKFSLGVAEPK+GSHIFE T IPCQSNEFV
Sbjct: 62   QCNSVSEGIMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKIGSHIFEVTKIPCQSNEFV 121

Query: 1188 LELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL 1009
             ELLRGVR HF RFIKDLK  D+EKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL
Sbjct: 122  HELLRGVRLHFERFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTL 181

Query: 1008 DKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSELSEDQIPDLTEILGDE 829
            DKDVNSF+MRVREWYSWHFPELVKIVNDNY+YAK+AK++ +KS+LSED++P LT+ILGDE
Sbjct: 182  DKDVNSFAMRVREWYSWHFPELVKIVNDNYIYAKLAKFIDDKSKLSEDKLPALTDILGDE 241

Query: 828  DKAKEIVEAAKASMGQDLSVIDLINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNLAS 649
            DKAKE+VEAAKASMGQDLS IDLINV+QFAQRVM+L+EYRK+LHEYLV KMNDIAPNLAS
Sbjct: 242  DKAKEVVEAAKASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLHEYLVTKMNDIAPNLAS 301

Query: 648  LIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG 469
            LIGE+VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG
Sbjct: 302  LIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG 361

Query: 468  RASQRNKGRMARFLANKCSIASRIDCFAEGSTTVFGEKLREQVEERLDFYDKGIAPRKNI 289
            RAS RNKGRMAR+LANKCSIASRIDCFAE STTVFGEKLREQVEERLDFYDKG+APRKNI
Sbjct: 362  RASARNKGRMARYLANKCSIASRIDCFAESSTTVFGEKLREQVEERLDFYDKGVAPRKNI 421

Query: 288  DMMKEAIENVLSEGGEKTAMDVEEAP---SAXXXXXXXXXSETPVS-DGEPNGVTNGGAM 121
            D+MK AI    S   + TAM++EEAP   SA         S+T  + + E     NGGA 
Sbjct: 422  DVMKAAIG---SAENKDTAMEIEEAPAVASAKKSKKKKSKSDTAENGEAEDKPTVNGGAA 478

Query: 120  D 118
            +
Sbjct: 479  E 479


>ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 56-like [Cucumis
            sativus]
          Length = 552

 Score =  751 bits (1938), Expect = 0.0
 Identities = 380/479 (79%), Positives = 422/479 (88%), Gaps = 4/479 (0%)
 Frame = -1

Query: 1554 MTALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDA 1375
            MT+ YL++ES+SGYA+F  HG+DEIGQNT+AVR S+ DL RFGKVVKL AF PF SALDA
Sbjct: 1    MTSTYLLYESASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDA 60

Query: 1374 LNQINAVSEGLMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKLGSHIFEETNIPCQSNE 1195
            L Q N+VSEGLMTDELR+FLE+NLPK KEGKKAKF LG+AEPK+GS+IFEET IPCQSNE
Sbjct: 61   LKQCNSVSEGLMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNE 120

Query: 1194 FVLELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLD 1015
            FVLELLRGVR HF +FIKDLK  D+EKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLD
Sbjct: 121  FVLELLRGVRLHFDKFIKDLKQGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLD 180

Query: 1014 TLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSELSEDQIPDLTEILG 835
            TLDKD+NSFSMRVREWYSWHFPELVKIV DNYLYAK+AKY+++KS+L+ED+IP LT+I+G
Sbjct: 181  TLDKDINSFSMRVREWYSWHFPELVKIVGDNYLYAKLAKYIQDKSKLAEDKIPSLTDIIG 240

Query: 834  DEDKAKEIVEAAKASMGQDLSVIDLINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNL 655
            DEDKAKEIVEAAKASMGQDLS IDLINV+QFAQRVM+L++YRK+L++YLV KMNDIAPNL
Sbjct: 241  DEDKAKEIVEAAKASMGQDLSDIDLINVQQFAQRVMDLSDYRKKLYDYLVTKMNDIAPNL 300

Query: 654  ASLIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSF 475
            ASLIGE+VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKT+GNTPKYGLIFHSSF
Sbjct: 301  ASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSF 360

Query: 474  IGRASQRNKGRMARFLANKCSIASRIDCFAEGSTTVFGEKLREQVEERLDFYDKGIAPRK 295
            IGRAS RNKGRMAR+LANKCSIA+RIDCFAE STT FGEKLREQVEERLDFYDKGIAPRK
Sbjct: 361  IGRASARNKGRMARYLANKCSIATRIDCFAESSTTTFGEKLREQVEERLDFYDKGIAPRK 420

Query: 294  NIDMMKEAIENVLSEGGEKTAMDVEEAPSAXXXXXXXXXSETPVSDGE----PNGVTNG 130
            NID+MK AIE   S   + T MDVEE PS               ++GE    P+   NG
Sbjct: 421  NIDVMKAAIE---SADNKATDMDVEEVPSEASGKKSKKKKSKSNANGEVEDRPSATANG 476


>ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumis sativus]
          Length = 552

 Score =  751 bits (1938), Expect = 0.0
 Identities = 380/479 (79%), Positives = 422/479 (88%), Gaps = 4/479 (0%)
 Frame = -1

Query: 1554 MTALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDA 1375
            MT+ YL++ES+SGYA+F  HG+DEIGQNT+AVR S+ DL RFGKVVKL AF PF SALDA
Sbjct: 1    MTSTYLLYESASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDA 60

Query: 1374 LNQINAVSEGLMTDELRNFLELNLPKVKEGKKAKFSLGVAEPKLGSHIFEETNIPCQSNE 1195
            L Q N+VSEGLMTDELR+FLE+NLPK KEGKKAKF LG+AEPK+GS+IFEET IPCQSNE
Sbjct: 61   LKQCNSVSEGLMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNE 120

Query: 1194 FVLELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLD 1015
            FVLELLRGVR HF +FIKDLK  D+EKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLD
Sbjct: 121  FVLELLRGVRLHFDKFIKDLKQGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLD 180

Query: 1014 TLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSELSEDQIPDLTEILG 835
            TLDKD+NSFSMRVREWYSWHFPELVKIV DNYLYAK+AKY+++KS+L+ED+IP LT+I+G
Sbjct: 181  TLDKDINSFSMRVREWYSWHFPELVKIVGDNYLYAKLAKYIQDKSKLAEDKIPSLTDIIG 240

Query: 834  DEDKAKEIVEAAKASMGQDLSVIDLINVEQFAQRVMNLAEYRKRLHEYLVNKMNDIAPNL 655
            DEDKAKEIVEAAKASMGQDLS IDLINV+QFAQRVM+L++YRK+L++YLV KMNDIAPNL
Sbjct: 241  DEDKAKEIVEAAKASMGQDLSDIDLINVQQFAQRVMDLSDYRKKLYDYLVTKMNDIAPNL 300

Query: 654  ASLIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSF 475
            ASLIGE+VGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKT+GNTPKYGLIFHSSF
Sbjct: 301  ASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSF 360

Query: 474  IGRASQRNKGRMARFLANKCSIASRIDCFAEGSTTVFGEKLREQVEERLDFYDKGIAPRK 295
            IGRAS RNKGRMAR+LANKCSIA+RIDCFAE STT FGEKLREQVEERLDFYDKGIAPRK
Sbjct: 361  IGRASARNKGRMARYLANKCSIATRIDCFAESSTTTFGEKLREQVEERLDFYDKGIAPRK 420

Query: 294  NIDMMKEAIENVLSEGGEKTAMDVEEAPSAXXXXXXXXXSETPVSDGE----PNGVTNG 130
            NID+MK AIE   S   + T MDVEE PS               ++GE    P+   NG
Sbjct: 421  NIDVMKAAIE---SADNKATDMDVEEVPSEASGKKSKKKKSKSNANGEVEDRPSATANG 476


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