BLASTX nr result

ID: Coptis24_contig00000850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000850
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...    82   2e-13
ref|XP_003577650.1| PREDICTED: uncharacterized protein LOC100846...    81   3e-13
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-13
ref|XP_001766991.1| predicted protein [Physcomitrella patens sub...    79   2e-12
emb|CBI30725.3| unnamed protein product [Vitis vinifera]               78   3e-12

>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
 Frame = +2

Query: 17   LTYDQSDRLSSALKMLVKTEKQLSSSSDQTNWIVAALLQIA----------SEHVSNRTP 166
            L+ +  ++L  ALK L + EKQL  S+D+  W+ AALLQ+A          S++  N +P
Sbjct: 765  LSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYVLPTSSDNSFNHSP 824

Query: 167  SGIVLPRDIIIPADGKSEAASEHNLIHIPSSGISELFHHRRSRECQHAIDRASEQSGILT 346
              +         AD +  A    N + IP+ G       R S + +     A   +  +T
Sbjct: 825  FALK-------DADAREAARLTGNPVDIPNKG------RRLSMDARIENVHAGSSADGMT 871

Query: 347  NDL---------STFSRSNSKTKRCPSRKVKKEPNLG-QIGNMEEVWLNVLERIQDGYVK 496
              L         S F+  ++ ++     ++ +   LG     +EE+WL VLERIQ   +K
Sbjct: 872  RGLGSEKKRHSVSGFTPQHANSQATEKIRMSERQILGINRTKIEEIWLEVLERIQITGLK 931

Query: 497  EFLCHQGKIASLTLSSANAIVHLMFKRPEDKLAAQMSEESIANALKEALGCPVTVNMSLE 676
            EFL  +GK+ S++  +A   V LMF     K  A+     I  A +  LG  +T+ +  E
Sbjct: 932  EFLFKEGKLISVSFGAA-PTVQLMFSSQLTKSTAEKFRGHILQAFESVLGSSITIEIRCE 990

Query: 677  PLGIETDESTSVSNP 721
               +  D +++V  P
Sbjct: 991  ---LNKDTASAVQQP 1002


>ref|XP_003577650.1| PREDICTED: uncharacterized protein LOC100846453 [Brachypodium
            distachyon]
          Length = 1180

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 8/232 (3%)
 Frame = +2

Query: 8    GSKLTYDQSDRLSSALKMLVKTEKQLSSSSDQTNWIVAALLQIASEHVSNRTPSGIVLPR 187
            G  +T  + +RL  ALK+L   EKQ+  SS++  W  AALLQ+ S H S  T S     +
Sbjct: 720  GRNITDAELERLQQALKILSDAEKQIRLSSERATWFTAALLQLGSGHDSEVTQSRSSSKK 779

Query: 188  DIIIPADGKSEAASEHNLIHIPSSGISELFHHRRS---RECQHAIDRASEQSGILTNDLS 358
                 +D   EA  E +     S  +  +   RR+       H +  AS  S +  N+  
Sbjct: 780  SAKTTSDAVLEAVRESSASRTTSHPLFTIRGSRRTASGHSTPHGL--ASSSSRLRPNENL 837

Query: 359  TFSRSNSKTKRCPSRKVKKEPN-----LGQIGNMEEVWLNVLERIQDGYVKEFLCHQGKI 523
             +  S S  +  P        +     +G   N+ ++W N +E+     +++ L   GK+
Sbjct: 838  IYGESRSADRVLPDSAQTSNSDDQPIIIGSSDNLVKIWRNCIEKCHSKTLQQLLSDHGKL 897

Query: 524  ASLTLSSANAIVHLMFKRPEDKLAAQMSEESIANALKEALGCPVTVNMSLEP 679
            AS+       +  + F+    K  AQ    SI N+++  L C V V + L P
Sbjct: 898  ASIKECEGYLLAFIAFEDSTIKSRAQRFVSSIRNSMETVLRCNVEVIVGLMP 949


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 19/239 (7%)
 Frame = +2

Query: 17   LTYDQSDRLSSALKMLVKTEKQLSSSSDQTNWIVAALLQIA-----------SEHVSNRT 163
            L+ D  ++L  ALK L + EKQL  S+D+  W+ AALLQ+A           +E   N +
Sbjct: 761  LSKDDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYLLPSSSTETSFNHS 820

Query: 164  PSGI--VLPRDII------IPADGKSEAASEHNLIHIPSSGISELFHHRRSRECQHAIDR 319
            P  +  +  RDI       +         S H  +     G S  F +  S    +   +
Sbjct: 821  PLALNNMGGRDIARKGGERVEMPNNKRGLSTHVRLENLPGGTSANFQNSGSTNGINMDRK 880

Query: 320  ASEQSGILTNDLSTFSRSNSKTKRCPSRKVKKEPNLGQIGNMEEVWLNVLERIQDGYVKE 499
             +  SG+ +   S      S   R   R+V  +   G     EE+WL VLE+IQ   ++E
Sbjct: 881  RNAASGMASQWTSV---QTSDAVRVNGRQVSGKSRKGH----EEIWLEVLEKIQINSMRE 933

Query: 500  FLCHQGKIASLTLSSANAIVHLMFKRPEDKLAAQMSEESIANALKEALGCPVTVNMSLE 676
            FL  +GK+ S++  +A   V L+F     KL A+     I  A +  LG PVT+ +  E
Sbjct: 934  FLYQEGKLISVSFGAA-PTVQLIFSSHLTKLKAEKFRAHILQAFESVLGSPVTIEIRCE 991


>ref|XP_001766991.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162681733|gb|EDQ68157.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1473

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 45/262 (17%)
 Frame = +2

Query: 26   DQSDRLSSALKMLVKTEKQLSSSSDQTNWIVAALLQIASEH------------------- 148
            ++  RL  ALK+L + EKQL +S+D+  W+ AALLQ A +                    
Sbjct: 999  EEQQRLRQALKVLAECEKQLRASNDRPTWLTAALLQFAPDRSYLPSSVDTSMAPSPIAFD 1058

Query: 149  VSNRTPSGIVLPRDIIIPADGKSEAASEHNLIHIP---SSGISELFHHRRSR-------- 295
               R P G      +  P       +S  +   +P   SS +S+  H  R +        
Sbjct: 1059 TFERVPPGEPCTPRLPPPQPASESRSSRKHSQQVPNDVSSALSQPVHGHRDKDKAPVSAS 1118

Query: 296  ------------ECQHAIDRASEQSGILTNDLSTFSRSNSKTKRCPSRKV-KKEPNLGQI 436
                        + Q  +  A+ +S +   D ++   ++S     PS+ V  ++  +   
Sbjct: 1119 PTGKPKGPPTGNQLQSKVHHAATESAMDQADDTSLRSASSLVLFDPSQAVGSRDFRMLTR 1178

Query: 437  GNMEEVWLNVLERIQDGYVKEFLCHQGKIASLTLS--SANAIVHLMFKRPEDKLAAQMSE 610
             +ME++W  VL+  +   +++ L  QG + +L+++     A+ H+ F+ P  K  A+   
Sbjct: 1179 RDMEDIWGKVLDGCRSNVLRQLLSSQGTLMALSVARDETFAVAHVEFRSPGHKARAERLR 1238

Query: 611  ESIANALKEALGCPVTVNMSLE 676
             S  +A + ALGCPV + +SLE
Sbjct: 1239 SSTCHAFQMALGCPVELKLSLE 1260


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 67/220 (30%), Positives = 102/220 (46%)
 Frame = +2

Query: 17   LTYDQSDRLSSALKMLVKTEKQLSSSSDQTNWIVAALLQIASEHVSNRTPSGIVLPRDII 196
            L+ +  ++L  ALK L + EKQL  S+D+  W+ AALLQ+A +             +  +
Sbjct: 577  LSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPD-------------QQYM 623

Query: 197  IPADGKSEAASEHNLIHIPSSGISELFHHRRSRECQHAIDRASEQSGILTNDLSTFSRSN 376
            +P+        +H       SG++      R +   H+ D         TN LS      
Sbjct: 624  LPSSSADTNRKKH-----AGSGMA------RQQSSAHSAD---------TNRLS------ 657

Query: 377  SKTKRCPSRKVKKEPNLGQIGNMEEVWLNVLERIQDGYVKEFLCHQGKIASLTLSSANAI 556
               K+ P  KV+KE        +EE+WL VLE+IQ   +KEFL  +GK+ S+++ +A   
Sbjct: 658  --GKQIPG-KVRKE--------IEEIWLEVLEKIQVDTLKEFLYKEGKLISVSIGAA-PT 705

Query: 557  VHLMFKRPEDKLAAQMSEESIANALKEALGCPVTVNMSLE 676
            V LMF     K  A+     I  A +  LG PVT+ +  E
Sbjct: 706  VQLMFSSHLTKSKAEKYRGHILRAFESILGSPVTIEIRSE 745


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