BLASTX nr result

ID: Coptis24_contig00000836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000836
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267934.1| PREDICTED: peroxisomal membrane protein 11-4...   140   1e-48
emb|CAN67008.1| hypothetical protein VITISV_028688 [Vitis vinifera]   138   1e-47
ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4...   133   4e-47
ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-45
ref|XP_002329882.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-45

>ref|XP_002267934.1| PREDICTED: peroxisomal membrane protein 11-4 [Vitis vinifera]
           gi|296084211|emb|CBI24599.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  140 bits (353), Expect(2) = 1e-48
 Identities = 64/83 (77%), Positives = 76/83 (91%)
 Frame = -1

Query: 881 NALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRMSFISAFGEAF 702
           NALRRNPGS PTFR+L VLANAGEMVYFFFDHFLWL+R+GV+D  LARRMSFISAFGE+F
Sbjct: 71  NALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLARRMSFISAFGESF 130

Query: 701 GYVFFVISDLIIIKEGLDAQREL 633
           GY+FF+ISD I+IK G++ +R+L
Sbjct: 131 GYIFFIISDFIMIKGGVEQERKL 153



 Score = 80.9 bits (198), Expect(2) = 1e-48
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = -3

Query: 1110 KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPDGAQRAK 985
            KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVE +HPD A +AK
Sbjct: 7    KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAHKAK 48


>emb|CAN67008.1| hypothetical protein VITISV_028688 [Vitis vinifera]
          Length = 227

 Score =  138 bits (347), Expect(2) = 1e-47
 Identities = 63/83 (75%), Positives = 75/83 (90%)
 Frame = -1

Query: 881 NALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRMSFISAFGEAF 702
           NALRRNPGS PTFR+L VLANAGEMVYFFFDHFLWL+R+GV+D  LA RMSFISAFGE+F
Sbjct: 71  NALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLAXRMSFISAFGESF 130

Query: 701 GYVFFVISDLIIIKEGLDAQREL 633
           GY+FF+ISD I+IK G++ +R+L
Sbjct: 131 GYIFFIISDFIMIKGGVEQERKL 153



 Score = 79.3 bits (194), Expect(2) = 1e-47
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -3

Query: 1110 KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPDGAQRAK 985
            KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVE +HPD A  AK
Sbjct: 7    KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAXXAK 48


>ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus]
           gi|449516001|ref|XP_004165036.1| PREDICTED: peroxisomal
           membrane protein 11-4-like [Cucumis sativus]
          Length = 227

 Score =  133 bits (334), Expect(2) = 4e-47
 Identities = 59/95 (62%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = -1

Query: 881 NALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRMSFISAFGEAF 702
           NALRR+PGS PTF++L VLANAGEMVYFFFDH LWL+R+G +D  LA++MSFISAFGE+F
Sbjct: 71  NALRRSPGSTPTFQFLAVLANAGEMVYFFFDHLLWLSRIGTLDAKLAKKMSFISAFGESF 130

Query: 701 GYVFFVISDLIIIKEGLDAQREL-SRKAELLDDKR 600
           GY+FF+++D+I++K G++A+R+L S K +  +D +
Sbjct: 131 GYIFFIVADVIMLKRGIEAERKLRSSKEDSKEDSK 165



 Score = 82.8 bits (203), Expect(2) = 4e-47
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = -3

Query: 1110 KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPDGAQRAK 985
            KLVIFLAKRDGIDKLVKTFQYVSKLVHWH+ETSHPD A RAK
Sbjct: 7    KLVIFLAKRDGIDKLVKTFQYVSKLVHWHLETSHPDKATRAK 48


>ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|222834122|gb|EEE72599.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  130 bits (328), Expect(2) = 2e-45
 Identities = 59/83 (71%), Positives = 71/83 (85%)
 Frame = -1

Query: 881 NALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRMSFISAFGEAF 702
           NALRR PG+ PT + L VLANAGEMVYFFFDHFLWL+R+G +D  LARRMSFISA GE+F
Sbjct: 71  NALRRGPGATPTLKVLAVLANAGEMVYFFFDHFLWLSRIGTLDAKLARRMSFISALGESF 130

Query: 701 GYVFFVISDLIIIKEGLDAQREL 633
           GY+FF+I+D II+KEGL+ +R L
Sbjct: 131 GYIFFIIADFIIMKEGLETERRL 153



 Score = 79.7 bits (195), Expect(2) = 2e-45
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -3

Query: 1110 KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPDGAQRAK 985
            KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVE +HPD A R K
Sbjct: 7    KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATHPDAAMRFK 48


>ref|XP_002329882.1| predicted protein [Populus trichocarpa] gi|222871119|gb|EEF08250.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  130 bits (328), Expect(2) = 2e-45
 Identities = 59/83 (71%), Positives = 71/83 (85%)
 Frame = -1

Query: 881 NALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRMSFISAFGEAF 702
           NALRR PG+ PT + L VLANAGEMVYFFFDHFLWL+R+G +D  LARRMSFISA GE+F
Sbjct: 71  NALRRGPGATPTLKVLAVLANAGEMVYFFFDHFLWLSRIGTLDAKLARRMSFISALGESF 130

Query: 701 GYVFFVISDLIIIKEGLDAQREL 633
           GY+FF+I+D II+KEGL+ +R L
Sbjct: 131 GYIFFIIADFIIMKEGLETERRL 153



 Score = 79.7 bits (195), Expect(2) = 2e-45
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -3

Query: 1110 KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPDGAQRAK 985
            KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVE +HPD A R K
Sbjct: 7    KLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATHPDAAMRFK 48


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