BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000835
         (7316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   676   0.0  
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   665   0.0  
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   662   0.0  
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   650   0.0  
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   634   e-179

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  676 bits (1743), Expect = 0.0
 Identities = 403/1188 (33%), Positives = 603/1188 (50%), Gaps = 14/1188 (1%)
 Frame = +3

Query: 2520 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXXAVP 2699
            M I  WNC+G+G    V+Q++ L+   + D + ++ETK ++  +              V 
Sbjct: 1    MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 2700 AQGLSGGLAILWKED-VELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVW 2876
              G +GGL + WKE+ +   ++  S+N + G + +      W F  +YG P   N++K W
Sbjct: 61   CVGRAGGLCMFWKEETISFRMVSFSQNHICGDVGSNGDVR-WRFVGIYGWPEEENKHKTW 119

Query: 2877 AELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGP 3056
            A +K +     GP    GDFN I S DEK GG SR  +++  F + +++  L DL F G 
Sbjct: 120  ALIKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQ 179

Query: 3057 KYTWSNNRKPYDHILERLDRALATPEWLASFPNAQIRTWANAISDHVSLFINLAKKEEKL 3236
             +TW   R P   I ERLDR + +  WL  FP A I       SDH ++ +     E  +
Sbjct: 180  WHTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEG-M 238

Query: 3237 PRP----FKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFG 3404
            PR     F F   WL  +TC E +  AWN+           +K+    ++L  W+K  FG
Sbjct: 239  PRRRAGGFWFETFWLLDDTCEEVVRGAWNAAE----GGRICEKLGAVARELQGWSKKTFG 294

Query: 3405 NIFTNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGA 3584
            ++   I+A +  L     +  SI ++ +   L+ EL E + K E +W  +S  + +KDG 
Sbjct: 295  SLRKKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGD 354

Query: 3585 RNTKFFHLSTIFXXXXXXXXXXXXXXGDWKEGRNEVGASLNQYFQGIFTSDHPHRND--E 3758
            RNT +FH                   G W+    E+   + +YFQ IFTS  P  ND  E
Sbjct: 355  RNTSYFHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQE 414

Query: 3759 ILNLFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDV 3938
            +L      +T   N+I+    + EEI+  +  M   K+PGPDG   IFYQ+ W IIG +V
Sbjct: 415  VLQHVKRSVTQEYNDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEV 474

Query: 3939 IGLVKDFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKG 4118
               V    H  S    +N T+IALIPK+ +P   S+FRPISLCN  YKI SK +  RLK 
Sbjct: 475  FNFVSSILHNYSCPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKR 534

Query: 4119 LINKIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWT 4298
             +  I +  Q AF+ GR I DN  +A E+FH MK   +  +G +A+K+DM+KAYDRVEW 
Sbjct: 535  FLPCIATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWG 594

Query: 4299 FFDSIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIA 4478
            F   +   +GF+ +W +++  CV+TVS+  ++NG       P RG+RQGDPLSP+LFI+ 
Sbjct: 595  FLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILV 654

Query: 4479 SEALSRMIAKAEQEEEIHGIKIKRNSPALSHLLYADDLILFTKANMVESGNLKRILDGYC 4658
            ++A S+M+ +    +EIHG K  RN P +SHLL+ADD +LFT+A   E   +  IL+ Y 
Sbjct: 655  ADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYE 714

Query: 4659 EASGQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDY 4838
             ASGQK+N+EK+ + FSR V+  +K  L     +R       YLG+P +  R K   F  
Sbjct: 715  AASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRE 774

Query: 4839 LVDKIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWW 5018
            L+D++  K++GW+ K+LS+AG+  LI+AV+Q+ P Y M  Y LPV+   +I  A   FWW
Sbjct: 775  LLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWW 834

Query: 5019 VGKEQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTMFS 5198
             GK   + +H + WE +C+PK +GG+G +     N A+L K  W+   + +SL +R M +
Sbjct: 835  GGKGDERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSA 894

Query: 5199 IYGKHWIGDVK--KPPDKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGK 5372
             Y  H  GDV+  +     SY W+ I    + +  GLIW +G+G  I     PW+     
Sbjct: 895  KYYPH--GDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVG---- 948

Query: 5373 PSTLEELG---VAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDN 5543
                +E G    +A      VV DL   ++  W+   +  H N    + IL I +     
Sbjct: 949  ----DEEGRFIKSARVEGLEVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTR-C 1003

Query: 5544 SPDKMKWGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQMFLWKL 5723
              D++ W   + G  SVK+ Y   K     G +    H     +W   +   ++ FLW+ 
Sbjct: 1004 LQDELTWAYSKDGTYSVKTAYMLGK-----GGNLDDFHRVWNILWSLNVSPKVRHFLWRA 1058

Query: 5724 YMQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVW--FGSQAGLRVHKD 5897
                LP   VL  R +  +  CP C +E E+  HLF+ C     +W   GS   L   +D
Sbjct: 1059 CTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIED 1118

Query: 5898 QQTSIRERLDLFLTWCCSPDEELRLAGTHIAILMQKIWQARNHLKFEN 6041
            +        D  + W    D ++   G +I   +  +W  RN   FE+
Sbjct: 1119 E-----AMCDTLVRW-SQMDAKVVQKGCYI---LWNVWVERNRRVFEH 1157


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  665 bits (1715), Expect = 0.0
 Identities = 393/1198 (32%), Positives = 608/1198 (50%), Gaps = 6/1198 (0%)
 Frame = +3

Query: 2520 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXXAVP 2699
            M I  WNCRG+G   +V+Q++    +F+ DI+ ++ET  ++  +              V 
Sbjct: 1    MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVA 60

Query: 2700 AQGLSGGLAILWKEDVELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVWA 2879
            + G +GGL + WKE+V   ++  S++ + G + +    + W F  VYG      ++  W+
Sbjct: 61   SVGRAGGLCLYWKEEVMFSLVSFSQHHICGDVED--GNKKWRFVGVYGWAKEEEKHLTWS 118

Query: 2880 ELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGPK 3059
             L+ +      P  L GDFN I S  EK GG +R+ + M  F   ++ L L DLG+ G  
Sbjct: 119  LLRHLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVGTW 178

Query: 3060 YTWSNNRKPYDHILERLDRALATPEWLASFPNAQIRTWANAISDHVSLFINL--AKKEEK 3233
            YTW   R P   I ERLDR L +  WL  +P++         SDH ++ +    A +   
Sbjct: 179  YTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRPRG 238

Query: 3234 LPRPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFGNIF 3413
              R   F   WL  + C   + ++W +   E+       ++    + L  W+   F N+ 
Sbjct: 239  KTRRLHFETSWLLDDECEAVVRESWENSEGEVMTG----RVASMGQCLVRWSTKKFKNLS 294

Query: 3414 TNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGARNT 3593
              I+  +  L    + P S S   +   L+ +L E + K E +W  +S  + +KDG +NT
Sbjct: 295  KQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRVAEVKDGDKNT 354

Query: 3594 KFFHLSTIFXXXXXXXXXXXXXXGDWKEGRNEVGASLNQYFQGIFTSDHPH--RNDEILN 3767
            K+FH                   G W+E  + +      YF  IFTS +P     + +++
Sbjct: 355  KYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSLEAVMS 414

Query: 3768 LFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDVIGL 3947
            +  P +T   N  +    + +EI   +++M   K+PGPDG   IFYQ+ W I+G DV   
Sbjct: 415  VIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHIVGDDVTSF 474

Query: 3948 VKDFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKGLIN 4127
            + +  H  S    +N T+IALIPK+ NP  A++FRPI+LCN  YK++SK +  RLK  + 
Sbjct: 475  ISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFRPIALCNVLYKLMSKAIVMRLKSFLP 534

Query: 4128 KIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWTFFD 4307
            +I+S  Q AF+ GR I DN  +A EVFH+MKN     +G IA+K+DM+KAYDRVEW F  
Sbjct: 535  EIISENQSAFVPGRLITDNALIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLR 594

Query: 4308 SIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIASEA 4487
             +   +GF+ +W ++I + VS+V++  ++NGS     VP RG+RQGDPLSPYLFI+ ++A
Sbjct: 595  KLLLTMGFDGRWVNLIMEFVSSVTYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADA 654

Query: 4488 LSRMIAKAEQEEEIHGIKIKRNSPALSHLLYADDLILFTKANMVESGNLKRILDGYCEAS 4667
             S+MI +  Q++++HG K  R+ P +SHL +ADD +LFT+AN  E   +  IL+ Y  AS
Sbjct: 655  FSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELAS 714

Query: 4668 GQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDYLVD 4847
            GQK+N+EK+ + +SR V+  QK  L     +R     + YLG+P +  R K   FD L+D
Sbjct: 715  GQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLID 774

Query: 4848 KIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWWVGK 5027
            +I  K++GW+ K+LS+AG+  L+++V+Q+ P Y M  Y  PV    KI  A   FWW   
Sbjct: 775  RIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSS 834

Query: 5028 EQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTMFSIYG 5207
            +  + +H   W+ +C  K  GG+G +     N A+L +  W+   + QSL  R M + Y 
Sbjct: 835  DTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYF 894

Query: 5208 KHWIGDVKKPP--DKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGKPST 5381
             +   D    P    +SY W  I  +   +  G+IW +GNG+ I+   DPW+   G    
Sbjct: 895  PNC--DFLNAPLGHSSSYSWSSIWSSKALLKEGVIWRVGNGSQINMWSDPWVLDEG---- 948

Query: 5382 LEELGVAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDNSPDKMK 5561
                  + P      VS+L   D+  W  + L   LN    R IL   +      PD++ 
Sbjct: 949  -GRFLTSTPHASIRWVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATP-VPDELT 1006

Query: 5562 WGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQMFLWKLYMQILP 5741
            W   +    SVK+ Y   K     G +    H     IW   +   ++ FLW+L    LP
Sbjct: 1007 WAFTKDATYSVKTAYMIGK-----GGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCTTSLP 1061

Query: 5742 TGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVWFGSQAGLRVHKDQQTSIRER 5921
               +L  R +  D  CP+   E+E+  H  F C  +R +W  S       +D   S+   
Sbjct: 1062 VRSLLKHRHLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDASMSM--- 1118

Query: 5922 LDLFLTWCCSPDEELRLAGTHIAILMQKIWQARNHLKFENRKTNCERLIRESCKLAEK 6095
             DL ++W  S D +LR+ G ++A     IW  RN   F N+ T    L++   +L E+
Sbjct: 1119 CDLLVSW-RSLDGKLRIKGAYLAWC---IWGERNAKIFNNKTTPSSVLMQRVSRLVEE 1172


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  662 bits (1708), Expect = 0.0
 Identities = 384/1203 (31%), Positives = 616/1203 (51%), Gaps = 20/1203 (1%)
 Frame = +3

Query: 2520 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXXAVP 2699
            M I +WNC+G+G T  V+ ++++ G +  +++ L ETK  +  +              V 
Sbjct: 1    MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 2700 AQGLSGGLAILWKEDVELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVWA 2879
              G SGGLA++WK+ V+++VL S +  +   L   +  + ++ T +YG P+   R ++W 
Sbjct: 61   PIGKSGGLALMWKDSVQIKVLQSDKRLIDALL--IWQDKEFYLTCIYGEPVQAERGELWE 118

Query: 2880 ELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGPK 3059
             L  +     GPW L GDFN +    EKIGG +R   S  EF   +N  GL ++   G +
Sbjct: 119  RLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQ 178

Query: 3060 YTWSNNRKPYDHILE-RLDRALATPEWLASFPNAQIRTWANAISDHVSLFINLAKKEEKL 3236
            ++W  NR   D +++ RLDR +A   W+  FP A+        SDH  L  NL     + 
Sbjct: 179  FSWYGNRN--DELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRK 236

Query: 3237 PRPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFGNIFT 3416
               FK+   W++ E   + +   W+  S +  ++  ++K+    ++++ W +    +   
Sbjct: 237  WAGFKYDKRWVQREGFKDLLCNFWSQQSTKT-NALMMEKIASCRREISKWKRVSKPSSAV 295

Query: 3417 NIKATQANLDTVLSK-PFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGARNT 3593
             I+  Q  LD    + PF   +  +  +LK EL + Y+ EE FW++KS   W+++G RNT
Sbjct: 296  RIQELQFKLDAATKQIPF---DRRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNT 352

Query: 3594 KFFHLSTIFXXXXXXXXXXXXXXGDWKEGRNEVGASLNQYFQGIFTSDHPHRNDEILNLF 3773
            K+FH +T                G       ++G     YF+ +F S+      E L   
Sbjct: 353  KYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENL 412

Query: 3774 HPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDVIGLVK 3953
             P ++ + N  + A  T EE+      +  +K PGPDG  G  YQ+ W+ +G  +  +V+
Sbjct: 413  TPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQ 472

Query: 3954 DFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKGLINKI 4133
             FF  GS+   +N+T+I LIPKI   +  + FRPISLCN  YK+I K++ANRLK ++  +
Sbjct: 473  AFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSL 532

Query: 4134 VSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWTFFDSI 4313
            +S  Q AF+KGR I DN+ +A E+ H + +    +E +IA+K D++KAYDRVEW F +  
Sbjct: 533  ISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKA 592

Query: 4314 FEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIASEALS 4493
               LGF   W  +I +CV +V +QV++NG+P    +P RG+RQGDPLSPYLF+I +E L 
Sbjct: 593  MRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLV 652

Query: 4494 RMIAKAEQEEEIHGIKIKRNSPALSHLLYADDLILFTKANMVESGNLKRILDGYCEASGQ 4673
            +M+  AEQ+ +I G+K+ R +P +SHLL+ADD + + K N    G + RI++ Y  ASGQ
Sbjct: 653  KMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQ 712

Query: 4674 KVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDYLVDKI 4853
            +VN+ K+SI+F ++++  ++  +KR   +   G + +YLG+P      K     YL D++
Sbjct: 713  RVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRL 772

Query: 4854 HNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWWVGKEQ 5033
              K+ GW++  LS  G+  L++AV  + P Y MS + +P + C +I+    +FWW  K++
Sbjct: 773  GKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKE 832

Query: 5034 SQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTMFSIYGKH 5213
             + +H   W H+ +PK VGGLG ++    NIA+L K  W+  T+  SL  +   S Y   
Sbjct: 833  GRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSK 892

Query: 5214 WIGDVKKPP--DKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGKPSTLE 5387
               D    P   + S+ WK I+     I  G+   IGNG +I+   DPW+    KP+   
Sbjct: 893  --SDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWI--GAKPAKAA 948

Query: 5388 ELGVAAPTLDS------SVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDNSP 5549
            +    +  +         VV DL LPD   W+   +SL         IL ++   ++ + 
Sbjct: 949  QAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKE-TR 1007

Query: 5550 DKMKWGQDRGGNISVKSVY-------NFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQM 5708
            D+  W   R G+ SVKS Y       N      E+ Q S       + IW+  +P  I  
Sbjct: 1008 DRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSL--DPIFQQIWKLDVPPKIHH 1065

Query: 5709 FLWKLYMQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVWFGSQAGLRV 5888
            FLW+     L     LA R +  + SC  C    E+  HL F C + R+ W  S      
Sbjct: 1066 FLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPP 1125

Query: 5889 HKDQQTSIRERLDLFLTWCCSPDEELRLAGTHIAI---LMQKIWQARNHLKFENRKTNCE 6059
              +   S+   +   L+   S  EE      H A+   ++ ++W+ RN L F+ R+    
Sbjct: 1126 GGEWAESLFRNMHHVLSVHKSQPEE----SDHHALIPWILWRLWKNRNDLVFKGREFTAP 1181

Query: 6060 RLI 6068
            ++I
Sbjct: 1182 QVI 1184


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  650 bits (1677), Expect = 0.0
 Identities = 405/1255 (32%), Positives = 626/1255 (49%), Gaps = 14/1255 (1%)
 Frame = +3

Query: 2520 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXXAVP 2699
            M I  WNCRG+G    V+Q++     ++ DI+ L+ET  ++                 V 
Sbjct: 1    MNILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVS 60

Query: 2700 AQGLSGGLAILWKEDVELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVWA 2879
            ++G +GGL + W+E++   ++  S++ + G + +    + W F  +YG      ++  W+
Sbjct: 61   SRGRAGGLCVFWREELSFSLVSFSQHHICGDIDD--GAKKWRFVGIYGWAKEEEKHHTWS 118

Query: 2880 ELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGPK 3059
             ++ +   +  P  + GDFN I S +EK GG  R+ + M +F   +++L L DLG+ G  
Sbjct: 119  LMRFLCEDLSRPILMGGDFNEIMSYEEKEGGADRVRRGMYQFRETMDDLFLRDLGYNGVW 178

Query: 3060 YTWSNNRKPYDHILERLDRALATPEWLASFPNAQIRTWANAISDHVSLFI--NLAKKEEK 3233
            +TW         I ERLDR + +P W   +PN  +       SDH+++ +  N  ++   
Sbjct: 179  HTWERGNSLSTCIRERLDRFVCSPSWATMYPNTIVDHSMRYKSDHLAICLRSNRTRRPTS 238

Query: 3234 LPRPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFGNIF 3413
              R F F   WL   TC ETI  AW   + +    +   +++     L  W+    GNI 
Sbjct: 239  KQRRFFFETSWLLDPTCEETIRDAWTDSAGD----SLTGRLDLLALKLKSWSSEKGGNIG 294

Query: 3414 TNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGARNT 3593
              +   +++L  +  +P S +N      L+ +L E + K+E  W  +S    ++DG RNT
Sbjct: 295  KQLGRVESDLCRLQQQPISSANCEARLTLEKKLDELHAKQEARWYLRSRAMEVRDGDRNT 354

Query: 3594 KFFHLSTIFXXXXXXXXXXXXXXGDWKEGRNEVGASLNQYFQGIFTSDHPH--RNDEILN 3767
            K+FH                   G W E  +++      YF  IFTS +P   + +++L 
Sbjct: 355  KYFHHKASQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLNDVLC 414

Query: 3768 LFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDVIGL 3947
               P +T   N  +    + EE++  + +M   K+PGPDG   IFYQK W IIG DV   
Sbjct: 415  CVDPVVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQF 474

Query: 3948 VKDFFHQGSLNPR-LNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKGLI 4124
            V    H GS++P  +N T+IALIPK+ NP   ++FRPI+LCN  YK++SK L  RLK  +
Sbjct: 475  VSSILH-GSISPSCINHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFL 533

Query: 4125 NKIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWTFF 4304
             ++VS  Q AF+ GR I DN  +A EVFH+MK+     +G IA+K+DM+KAYDRVEW F 
Sbjct: 534  PRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFL 593

Query: 4305 DSIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIASE 4484
              +   +GF+ +W ++I  CVS+VS+  ++NG       P RG+R GDPLSPYLFI+ ++
Sbjct: 594  RKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIAD 653

Query: 4485 ALSRMIAKAEQEEEIHGIKIKRNSPALSHLLYADDLILFTKANMVESGNLKRILDGYCEA 4664
            A S+MI K  QE+++HG K  R+ P +SHL +AD  +LFT+A+  E   +  IL+ Y +A
Sbjct: 654  AFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYEQA 713

Query: 4665 SGQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDYLV 4844
            SGQK+N++K+ + FS+ V+  QK  L    +++       YLG+P +  R ++  FD L+
Sbjct: 714  SGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDSLM 773

Query: 4845 DKIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWWVG 5024
            D+I  K++GW+ K+LS+AG+  L+++V+Q+ P Y M  Y LP S   KI  A   FWW  
Sbjct: 774  DRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARFWWGS 833

Query: 5025 KEQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTM-FSI 5201
             +  + +H   W+ +C  K  GG+G R  R  N A+L +  W+   +  SL  R M    
Sbjct: 834  SDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKY 893

Query: 5202 YGKHWIGDVKKPPDKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGKPST 5381
            Y  H   D        SY W+ I  +   +  G++W IGNG ++   +DPW+        
Sbjct: 894  YSNHDFLDAPLGV-STSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWEDPWV-------- 944

Query: 5382 LEELG---VAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDNSP- 5549
            L+ELG    +    + ++VS+L   D+  W   K+SL    F  R I  I   P  + P 
Sbjct: 945  LDELGRFITSEKHGNLNMVSELIDFDRMEW---KVSLIETVFNERDIKCILSIPLSSLPL 1001

Query: 5550 -DKMKWGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQMFLWKLY 5726
             D++ W   +  + SVK+ Y   K     G +    H     IW   +   ++ FLW+L 
Sbjct: 1002 KDELTWAFTKNAHYSVKTAYMLGK-----GGNLDSFHQAWIDIWSMEVSPKVKHFLWRLG 1056

Query: 5727 MQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVWFGSQAGLRVHKDQQT 5906
               LP   +L  R +  D  CP    E ES  H  F C ++R +W  S           T
Sbjct: 1057 TNTLPVRSLLKHRHMLDDDLCPRGCGEPESQFHAIFGCPFIRDLWVDSGCDNFRALTTDT 1116

Query: 5907 SIRERLDLFLTWCCSPDEELRLAGTHIAILMQKIWQARNHLKFENRKTNCERLIRESCKL 6086
            ++ E     L      D  +R  G  +A +   +W  RN + F    T    L+    +L
Sbjct: 1117 AMTEA----LVNSHGLDASVRTKGAFMAWV---LWSERNSIVFNQSSTPPHILLARVSRL 1169

Query: 6087 AEKCYLAYSEEHPYT---NPDLTYDEITLDSVFPIIPNASILINFDASFHRQQGW 6242
             E       E   YT    P+     I    V+   P   I +N DAS     GW
Sbjct: 1170 VE-------EHGTYTARIYPNRNCCAIPSARVWAAPPPEVIKLNVDASL-ASAGW 1216


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  634 bits (1636), Expect = e-179
 Identities = 358/1084 (33%), Positives = 569/1084 (52%), Gaps = 18/1084 (1%)
 Frame = +3

Query: 2835 VYGNPIAHNRNKVWAELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSF 3014
            +YG+  +  +++ W  ++ +      PW + GDFN I    EK GGR +   +M EF   
Sbjct: 351  LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRHA 410

Query: 3015 INELGLVDLGFKGPKYTWSNNRKPYD-HILERLDRALATPEWLASFPNAQIRTWANAISD 3191
            + + GL DLGF+G  +TW N+    + +I ERLDRA+A PEW A FP A++       SD
Sbjct: 411  LTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVINGDPRHSD 470

Query: 3192 HVSLFINLAKKEEKLP-----RPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKM 3356
            H  + I L  K + +        F+F   WL+ E   E +++AW+ +S  L        +
Sbjct: 471  HRPVIIELEGKNKGVRGRNGHNDFRFEAAWLEEEKFKEVVKEAWD-VSAGLQGLPVHASL 529

Query: 3357 EKTTKDLALWNKHVFGNIFTNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEE 3536
                  L+ W+ +V G++   +K  +  L+T   +P S     + + L+  L +   + +
Sbjct: 530  AGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRLEKLEQQVD 589

Query: 3537 DFWKQKSSQSWLKDGARNTKFFHLSTIFXXXXXXXXXXXXXXGDWKEGRNEVGASLNQYF 3716
             +WKQ++  +WL  G RNT FFH S                 G W E   +  A + ++F
Sbjct: 590  IYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFF 649

Query: 3717 QGIFTSDHPHRNDEILNLFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQG 3896
            + +FTS+    + ++L++    ++   NE + A  T EE+   +  +G  K+PGPDG   
Sbjct: 650  KQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPA 709

Query: 3897 IFYQKCWDIIGPDVIGLVKDFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFG 4076
             FY+ CWD++G  V   V +    G++    N+  I LIPK+  P+     RPISLCN  
Sbjct: 710  GFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVC 769

Query: 4077 YKIISKILANRLKGLINKIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIAL 4256
            YK++SK+LANRLK ++  ++SP Q AF+ GR I DN+ +A E+ H M+N +S   G+ A 
Sbjct: 770  YKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAF 829

Query: 4257 KVDMAKAYDRVEWTFFDSIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGV 4436
            K+DM+KAYDRVEW+F   +  KLGF+  W ++I +CVSTV++++ +NG   E F P RG+
Sbjct: 830  KLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGL 889

Query: 4437 RQGDPLSPYLFIIASEALSRMIAKAEQEEEIHGIKIKRNSPALSHLLYADDLILFTKANM 4616
            RQGDPLSPYLF++ +E  S +++K E+E  +HGI+I + +P++SHLL+ADD ++  +AN 
Sbjct: 890  RQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANG 949

Query: 4617 VESGNLKRILDGYCEASGQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGV 4796
             E+  L+ IL  Y E SGQ +N +K+++ FS N +  +K  +     ++     + YLG+
Sbjct: 950  GEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGL 1009

Query: 4797 PIMLSRKKSEDFDYLVDKIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVS 4976
            P+ + R +++ F YL ++I  +I+GW+ K+LS+AG+  LI+AV Q+ P +AM  + L   
Sbjct: 1010 PVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKD 1069

Query: 4977 TCTKIDKACRDFWWVGKEQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKA 5156
             C +I K    +WW  +E+   +H + W  +  PK++GGLG R     N+AMLAK  W+ 
Sbjct: 1070 LCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRL 1129

Query: 5157 ATDLQSLWTRTMFSIYGKHWIGDVKKP--PDKASYFWKGIHRTFNDISGGLIWAIGNGNS 5330
              D  SL +R + + Y    +GD  +P      SY W+ I +    +  G+IW +G+G+ 
Sbjct: 1130 IQDPDSLCSRVLRAKYFP--LGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSK 1187

Query: 5331 ISALKDPWLYCNGKPSTLEELGVAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRK 5510
            I+   DPW+        +   G    T     V +L  P    WDE  LS          
Sbjct: 1188 INIWADPWIPRGWSRKPMTPRGANLVT----KVEELIDPYTGTWDEDLLSQTFWEEDVAA 1243

Query: 5511 ILDIKIRPEDNSPDKMKWGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLT--------- 5663
            I  I +  E    D + W  D  G  +VKS Y   +        + C  ++         
Sbjct: 1244 IKSIPVHVE--MEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDF 1301

Query: 5664 LRHIWRAPLPAYIQMFLWKLYMQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCE 5843
             + +W+  +P  I+ FLW++    L     L  R +  D  C  C +  E A HLFF C+
Sbjct: 1302 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1361

Query: 5844 WVRMVWFG-SQAGLRVHKDQQTSIRERLDLFLTWCCSPDEELRLAGTHIAILMQKIWQAR 6020
             V+ VW   +   LR   +QQTS +  L       C P+ E     T   + + + W+ R
Sbjct: 1362 PVKKVWQALNLEELRSMLEQQTSGKNVLQSIY---CRPENE----RTSAIVCLWQWWKER 1414

Query: 6021 NHLK 6032
            N ++
Sbjct: 1415 NEVR 1418



 Score = 62.8 bits (151), Expect = 1e-06
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
 Frame = +1

Query: 334 RMKEDRRFDRVDFWVQIFGLPRDRINEKNVHKVGSTLGKVKGMDLQCSSAFKNPVARVRV 513
           ++ ED  F  V  WV+   LP   + ++    +G  +G+   MDL+   +      R+++
Sbjct: 11  KLIEDMIFAFVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKI 70

Query: 514 RMDIRERLLKGIELSTELGE-VLYVSFKYEKLEIFCYFCGCIGHDIHYC 657
           R+DIR+ L++G+ L     E  L+    YE L  FCY CG +GH    C
Sbjct: 71  RIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTEKLC 119