BLASTX nr result

ID: Coptis24_contig00000828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000828
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC67861.1| hypothetical protein OsI_35481 [Oryza sativa Indi...    57   1e-06
gb|EEC66512.1| hypothetical protein OsI_32628 [Oryza sativa Indi...    57   1e-06
emb|CAE02508.1| P0076O17.6 [Oryza sativa Japonica Group] gi|3834...    57   2e-06
gb|EEE51830.1| hypothetical protein OsJ_33316 [Oryza sativa Japo...    57   2e-06
gb|ACM17625.1| F-box family-10 [Oryza nivara]                          57   2e-06

>gb|EEC67861.1| hypothetical protein OsI_35481 [Oryza sativa Indica Group]
          Length = 523

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -1

Query: 472 ASQEVDKRRSLYSSKRTVMAVKR-MKKRLKISMDRIGELPVDILYFILSLLTVKEAVRTS 296
           A Q  D    L   KR  +A  R  KK+ +++ DRI  LP ++L+ +LSLL V +AV T 
Sbjct: 78  ARQPFDGMPPLAPRKRKAVAAARGRKKKERVAPDRISALPDEVLHLVLSLLPVHDAVATC 137

Query: 295 ILSRRWRFLWK 263
           +L+RRW  LWK
Sbjct: 138 VLARRWLHLWK 148


>gb|EEC66512.1| hypothetical protein OsI_32628 [Oryza sativa Indica Group]
          Length = 214

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
 Frame = -1

Query: 427 RTVMAVKRMKKRLKI---SMDRIGELPVDILYFILSLLTVKEAVRTSILSRRWRFLWKTT 257
           R V+AV R K +       MD I +LP +IL+ I+S L  ++AV+T +LSRRWR LW+T 
Sbjct: 36  RGVLAVARRKVKTPAHAAGMDWISDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWRTV 95

Query: 256 ---LASSPKLELDVVNRRCKDFPDNKIG-YCLAGPFYSCV 149
               A   + +     R   +F    +G +CL G FY+ +
Sbjct: 96  PCINADCKEFDFFGFRRSEVEFKSLTLGHWCLHGNFYTLI 135


>emb|CAE02508.1| P0076O17.6 [Oryza sativa Japonica Group]
           gi|38346575|emb|CAE04222.2| OSJNBa0064D20.6 [Oryza
           sativa Japonica Group]
          Length = 291

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/50 (52%), Positives = 39/50 (78%)
 Frame = -1

Query: 373 RIGELPVDILYFILSLLTVKEAVRTSILSRRWRFLWKTTLASSPKLELDV 224
           R+GELP ++L  ILS LT ++AV+TS+LSRRWR LW++T    P+ ++D+
Sbjct: 38  RLGELPDELLLSILSCLTTRQAVQTSVLSRRWRHLWRST----PRFDVDL 83


>gb|EEE51830.1| hypothetical protein OsJ_33316 [Oryza sativa Japonica Group]
          Length = 324

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/56 (44%), Positives = 39/56 (69%)
 Frame = -1

Query: 430 KRTVMAVKRMKKRLKISMDRIGELPVDILYFILSLLTVKEAVRTSILSRRWRFLWK 263
           ++ V A +  KK+ +++ DRI  LP ++L+ +LSLL V +AV T +L+RRW  LWK
Sbjct: 9   RKAVAAARGRKKKERVAPDRISALPDEVLHLVLSLLPVHDAVATCVLARRWLHLWK 64


>gb|ACM17625.1| F-box family-10 [Oryza nivara]
          Length = 366

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/56 (44%), Positives = 39/56 (69%)
 Frame = -1

Query: 430 KRTVMAVKRMKKRLKISMDRIGELPVDILYFILSLLTVKEAVRTSILSRRWRFLWK 263
           ++ V A +  KK+ +++ DRI  LP ++L+ +LSLL V +AV T +L+RRW  LWK
Sbjct: 9   RKAVAAARGRKKKERVAPDRISALPDEVLHLVLSLLPVHDAVATCVLARRWLHLWK 64


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