BLASTX nr result

ID: Coptis24_contig00000820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000820
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...   305   4e-81
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...   295   3e-78
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...   294   6e-78
ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas...   292   3e-77
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...   291   7e-77

>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
            gi|296090151|emb|CBI39970.3| unnamed protein product
            [Vitis vinifera]
          Length = 907

 Score =  305 bits (780), Expect = 4e-81
 Identities = 151/188 (80%), Positives = 168/188 (89%)
 Frame = -3

Query: 564  IFLGATNRMDLLDPALLRPGRFDRKIRIRPPGAKGRLAILKVHARKVKMSPTVDLSSYAQ 385
            IFLGATNRMDLLDPALLRPGRFDRKIRIRPP AKGRL ILKVHARKVK++ +VDLS+YAQ
Sbjct: 543  IFLGATNRMDLLDPALLRPGRFDRKIRIRPPNAKGRLDILKVHARKVKLAESVDLSTYAQ 602

Query: 384  NLPGWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVGPKRVGIELGHQGQCRR 205
            NLPGWTGA+            VR+GH +ILQSDVD+AVDRLTVGPKRVGIELGHQGQCRR
Sbjct: 603  NLPGWTGARLAQLLQEAALVAVRKGHEAILQSDVDEAVDRLTVGPKRVGIELGHQGQCRR 662

Query: 204  AATEVGTAMTAYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLH 25
            A TEVGTA+T++LL+RYE AKVE C+RIS+IPRGQ+LSQ+VF RLDDESY+FERRPQLLH
Sbjct: 663  ATTEVGTAITSHLLRRYESAKVERCDRISVIPRGQTLSQVVFDRLDDESYMFERRPQLLH 722

Query: 24   RLQVLLGG 1
            RLQVLLGG
Sbjct: 723  RLQVLLGG 730


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
            predicted protein [Populus trichocarpa]
          Length = 932

 Score =  295 bits (755), Expect = 3e-78
 Identities = 145/188 (77%), Positives = 162/188 (86%)
 Frame = -3

Query: 564  IFLGATNRMDLLDPALLRPGRFDRKIRIRPPGAKGRLAILKVHARKVKMSPTVDLSSYAQ 385
            IFL ATNR DLLDPALLRPGRFDRKIRIRPP AKGRL ILK+HA KVKMS +VDLS+Y +
Sbjct: 567  IFLAATNRRDLLDPALLRPGRFDRKIRIRPPNAKGRLEILKIHASKVKMSDSVDLSTYGK 626

Query: 384  NLPGWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVGPKRVGIELGHQGQCRR 205
            NLPGWTGAK            VR+GH +ILQSD+DDAVDRLTVGPKRVGIELGHQGQCRR
Sbjct: 627  NLPGWTGAKLAQLVQEAALVAVRQGHAAILQSDMDDAVDRLTVGPKRVGIELGHQGQCRR 686

Query: 204  AATEVGTAMTAYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLH 25
            A TE+G  MT++LL+RYE+AKVE C+RISI+PRGQ+LSQ+VFHRLDDESY+FER PQLLH
Sbjct: 687  ATTELGVVMTSHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERLPQLLH 746

Query: 24   RLQVLLGG 1
            RLQV LGG
Sbjct: 747  RLQVFLGG 754


>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 925

 Score =  294 bits (753), Expect = 6e-78
 Identities = 146/187 (78%), Positives = 162/187 (86%)
 Frame = -3

Query: 564  IFLGATNRMDLLDPALLRPGRFDRKIRIRPPGAKGRLAILKVHARKVKMSPTVDLSSYAQ 385
            IFL ATNR DLLDPALLRPGRFDRKIRIR P AKGRL ILK+HA KVKMS +VDLS+ A+
Sbjct: 563  IFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRLEILKIHASKVKMSESVDLSTCAK 622

Query: 384  NLPGWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVGPKRVGIELGHQGQCRR 205
            NLPGWTGAK            VR+GH SI+QSD+DDAVDRLTVGPKRVGI+LGHQGQCRR
Sbjct: 623  NLPGWTGAKLAQLVQEAALVAVRQGHASIIQSDIDDAVDRLTVGPKRVGIDLGHQGQCRR 682

Query: 204  AATEVGTAMTAYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLH 25
            A TEVG AMT++LL+ YEDAKVE C+RISI+PRGQ+LSQ+VFHRLDDESY+FERRPQLLH
Sbjct: 683  ATTEVGVAMTSHLLRLYEDAKVECCDRISIVPRGQTLSQVVFHRLDDESYMFERRPQLLH 742

Query: 24   RLQVLLG 4
            RLQVLLG
Sbjct: 743  RLQVLLG 749


>ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2,
            chloroplastic-like [Glycine max]
          Length = 925

 Score =  292 bits (747), Expect = 3e-77
 Identities = 145/188 (77%), Positives = 163/188 (86%)
 Frame = -3

Query: 564  IFLGATNRMDLLDPALLRPGRFDRKIRIRPPGAKGRLAILKVHARKVKMSPTVDLSSYAQ 385
            IFL ATNR DLLDPALLRPGRFDRKIRIRPP AKGR  ILK+H+ KVKMS +VDLSSYAQ
Sbjct: 562  IFLAATNRKDLLDPALLRPGRFDRKIRIRPPSAKGRHDILKIHSSKVKMSESVDLSSYAQ 621

Query: 384  NLPGWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVGPKRVGIELGHQGQCRR 205
            NLPGW+GA+            VR+ H SILQSD+DDAVDRLTVGPKRVGIELG+QGQCRR
Sbjct: 622  NLPGWSGARLAQLVQEAALVAVRKQHNSILQSDMDDAVDRLTVGPKRVGIELGYQGQCRR 681

Query: 204  AATEVGTAMTAYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLH 25
            A TE+G A+T++LL+RYE AKVE C+RISI+PRGQ+LSQ+VFHRLDDESY+FERRPQLLH
Sbjct: 682  ATTELGLALTSHLLRRYEHAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLH 741

Query: 24   RLQVLLGG 1
            RLQVLLGG
Sbjct: 742  RLQVLLGG 749


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
            gi|2262118|gb|AAB63626.1| cell division protein isolog
            [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
            division protein-like [Arabidopsis thaliana]
            gi|7269243|emb|CAB81312.1| cell division protein-like
            [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
            extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score =  291 bits (744), Expect = 7e-77
 Identities = 143/188 (76%), Positives = 161/188 (85%)
 Frame = -3

Query: 564  IFLGATNRMDLLDPALLRPGRFDRKIRIRPPGAKGRLAILKVHARKVKMSPTVDLSSYAQ 385
            IFLGATNR DLLDPALLRPGRFDRKIR+RPP AKGRL ILK+HA KVKMS +VDLSSYA 
Sbjct: 578  IFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYAS 637

Query: 384  NLPGWTGAKXXXXXXXXXXXXVRRGHGSILQSDVDDAVDRLTVGPKRVGIELGHQGQCRR 205
            NLPGW+GAK            VR+ H SILQSD+DDAVDRLTVGP R+G+ELGHQGQCRR
Sbjct: 638  NLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRR 697

Query: 204  AATEVGTAMTAYLLKRYEDAKVESCERISIIPRGQSLSQIVFHRLDDESYIFERRPQLLH 25
            A TEVG A+T++LL RYE+AK+E C+R+SIIPRGQ+LSQ+VFHRLDDESY+F R PQLLH
Sbjct: 698  ATTEVGVAITSHLLLRYENAKIERCDRVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLH 757

Query: 24   RLQVLLGG 1
            RLQVLLGG
Sbjct: 758  RLQVLLGG 765


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