BLASTX nr result

ID: Coptis24_contig00000817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000817
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576649.1| PREDICTED: cellulose synthase-like protein E...   124   8e-49
dbj|BAJ85551.1| predicted protein [Hordeum vulgare subsp. vulgar...   128   2e-48
ref|XP_002462534.1| hypothetical protein SORBIDRAFT_02g027570 [S...   117   1e-45
ref|XP_002522779.1| cellulose synthase, putative [Ricinus commun...   121   3e-45
ref|XP_003576648.1| PREDICTED: cellulose synthase-like protein E...   117   5e-45

>ref|XP_003576649.1| PREDICTED: cellulose synthase-like protein E6-like [Brachypodium
           distachyon]
          Length = 725

 Score =  124 bits (311), Expect(2) = 8e-49
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -1

Query: 553 GPLYIGTGCFHNRETLCGRKYSKEYKFDYREIIEDKVQESMTELEETTKILADCTFEKGT 374
           GPLYIGTGCFH RE LCGRK++++Y+ D+   I+DK+Q    E+EE  K LA CT+E  T
Sbjct: 364 GPLYIGTGCFHRREILCGRKFTEDYREDWNGGIKDKMQAHADEIEEKAKSLAACTYEHDT 423

Query: 373 QWGKEMGLKYGCPVEDVITGLSIH 302
           QWG E+GLKYGCPVEDVITGL+IH
Sbjct: 424 QWGDEIGLKYGCPVEDVITGLAIH 447



 Score = 95.1 bits (235), Expect(2) = 8e-49
 Identities = 41/62 (66%), Positives = 49/62 (79%)
 Frame = -3

Query: 188 TLAQTLVQHKRWAEGNFQLLLSKSGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATLYYNV 9
           TLAQTL+QHKRW+EGNF + LSK  PF  G G+I L HQ+ YC+YGLWAPN L TLYY +
Sbjct: 470 TLAQTLLQHKRWSEGNFSIFLSKYCPFLFGHGKITLQHQMGYCIYGLWAPNSLPTLYYLI 529

Query: 8   VP 3
           +P
Sbjct: 530 IP 531


>dbj|BAJ85551.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326508520|dbj|BAJ95782.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326514232|dbj|BAJ92266.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 731

 Score =  128 bits (322), Expect(2) = 2e-48
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = -1

Query: 553 GPLYIGTGCFHNRETLCGRKYSKEYKFDYREIIEDKVQESMTELEETTKILADCTFEKGT 374
           GPLYIGTGCFH RE LCGRK++K+Y+ D+   I+DK+QES+ E EE  K LA CT+E GT
Sbjct: 370 GPLYIGTGCFHRREILCGRKFTKDYQEDWNAGIKDKLQESIDETEEKAKSLATCTYEHGT 429

Query: 373 QWGKEMGLKYGCPVEDVITGLSIH 302
           QWG E+G+KYGC VEDVITGL+IH
Sbjct: 430 QWGDEIGVKYGCAVEDVITGLAIH 453



 Score = 89.4 bits (220), Expect(2) = 2e-48
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = -3

Query: 188 TLAQTLVQHKRWAEGNFQLLLSKSGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATLYYNV 9
           TLAQTL+QHKRW+EGNF + LS+   F  G G+ KL HQ+ Y +YGLWAPN LATLYY +
Sbjct: 476 TLAQTLLQHKRWSEGNFSIFLSRYNVFLFGHGKTKLRHQMGYHIYGLWAPNSLATLYYVI 535

Query: 8   VP 3
           +P
Sbjct: 536 IP 537


>ref|XP_002462534.1| hypothetical protein SORBIDRAFT_02g027570 [Sorghum bicolor]
           gi|241925911|gb|EER99055.1| hypothetical protein
           SORBIDRAFT_02g027570 [Sorghum bicolor]
          Length = 728

 Score =  117 bits (294), Expect(2) = 1e-45
 Identities = 54/84 (64%), Positives = 65/84 (77%)
 Frame = -1

Query: 553 GPLYIGTGCFHNRETLCGRKYSKEYKFDYREIIEDKVQESMTELEETTKILADCTFEKGT 374
           GPLYIGTGCFH RETLCGR+++K+YK D+   I+ +    + + EE  K LA CT+E  T
Sbjct: 366 GPLYIGTGCFHRRETLCGRRFTKDYKEDWDRGIKTE-HSCIEKTEEKAKSLATCTYEHNT 424

Query: 373 QWGKEMGLKYGCPVEDVITGLSIH 302
           QWG EMGLKYGCPVEDVITGL+IH
Sbjct: 425 QWGDEMGLKYGCPVEDVITGLAIH 448



 Score = 91.3 bits (225), Expect(2) = 1e-45
 Identities = 40/62 (64%), Positives = 48/62 (77%)
 Frame = -3

Query: 188 TLAQTLVQHKRWAEGNFQLLLSKSGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATLYYNV 9
           TLAQT++QHKRW+EGNF + LSK  PF  G G+ KL HQ+ Y +YGLWAPN L TLYY V
Sbjct: 471 TLAQTILQHKRWSEGNFSIFLSKFCPFLYGHGKTKLPHQMGYSIYGLWAPNSLPTLYYVV 530

Query: 8   VP 3
           +P
Sbjct: 531 IP 532


>ref|XP_002522779.1| cellulose synthase, putative [Ricinus communis]
           gi|223538017|gb|EEF39630.1| cellulose synthase, putative
           [Ricinus communis]
          Length = 728

 Score =  121 bits (303), Expect(2) = 3e-45
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = -1

Query: 553 GPLYIGTGCFHNRETLCGRKYSKEYKFDYREIIEDKVQESMTELEETTKILADCTFEKGT 374
           GPLYIG+GCFH R+ LCGRK+SK  KF+++       ++S+ +LEE TK LA CT+E+ T
Sbjct: 371 GPLYIGSGCFHRRDVLCGRKFSKNCKFEWKNDEALNAKQSIQDLEEETKPLASCTYEQNT 430

Query: 373 QWGKEMGLKYGCPVEDVITGLSI 305
           QWG EMGLKYGCPVEDVITGLSI
Sbjct: 431 QWGNEMGLKYGCPVEDVITGLSI 453



 Score = 86.3 bits (212), Expect(2) = 3e-45
 Identities = 40/62 (64%), Positives = 46/62 (74%)
 Frame = -3

Query: 188 TLAQTLVQHKRWAEGNFQLLLSKSGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATLYYNV 9
           TL+QTLVQHKRW+EG+ Q+LLSK  P     G+I LG QL YC Y LWAPN LATLYY +
Sbjct: 477 TLSQTLVQHKRWSEGDLQILLSKYSPAWYANGKISLGLQLGYCCYCLWAPNSLATLYYTI 536

Query: 8   VP 3
            P
Sbjct: 537 FP 538


>ref|XP_003576648.1| PREDICTED: cellulose synthase-like protein E6-like [Brachypodium
           distachyon]
          Length = 728

 Score =  117 bits (294), Expect(2) = 5e-45
 Identities = 51/84 (60%), Positives = 66/84 (78%)
 Frame = -1

Query: 553 GPLYIGTGCFHNRETLCGRKYSKEYKFDYREIIEDKVQESMTELEETTKILADCTFEKGT 374
           GP Y+GTGCFH RE LCGRK++++YK D+   ++DK QES+ E+EE  + LA C FE  T
Sbjct: 367 GPQYVGTGCFHRREILCGRKFAEDYKEDWNGGMKDKTQESIDEIEEKAESLAACMFEHDT 426

Query: 373 QWGKEMGLKYGCPVEDVITGLSIH 302
           QWG E+G+KYG PVED+ITGL+IH
Sbjct: 427 QWGDEIGVKYGYPVEDIITGLAIH 450



 Score = 89.0 bits (219), Expect(2) = 5e-45
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = -3

Query: 188 TLAQTLVQHKRWAEGNFQLLLSKSGPFSCGLGRIKLGHQLAYCVYGLWAPNCLATLYYNV 9
           TLAQT++QHKRW+EG+F + LSK  PF  G G+IKL HQ+ Y +YGLWAPN L TL+Y +
Sbjct: 473 TLAQTILQHKRWSEGSFSIFLSKYCPFLFGHGKIKLRHQMGYSIYGLWAPNSLPTLHYVI 532

Query: 8   VP 3
           +P
Sbjct: 533 IP 534


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