BLASTX nr result

ID: Coptis24_contig00000815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000815
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269102.1| PREDICTED: uncharacterized protein LOC100255...   397   e-108
emb|CBI29306.3| unnamed protein product [Vitis vinifera]              395   e-107
ref|XP_002512715.1| conserved hypothetical protein [Ricinus comm...   389   e-105
ref|XP_002303731.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|NP_199597.1| uncharacterized protein [Arabidopsis thaliana] ...   385   e-104

>ref|XP_002269102.1| PREDICTED: uncharacterized protein LOC100255874 [Vitis vinifera]
          Length = 438

 Score =  397 bits (1021), Expect = e-108
 Identities = 192/269 (71%), Positives = 226/269 (84%), Gaps = 1/269 (0%)
 Frame = +1

Query: 445  RSSTVPPGRIFCYQDETENKPRSEAAGIQLYGEIEKLMTETAKRSQDGWGVSGDWREVEG 624
            ++S+   G+I+C  D++  K +SE  GIQ+Y +IE+L+TET K+SQD WG S DW EVEG
Sbjct: 43   KASSQGDGQIYCNSDDS-GKKQSETTGIQVYSQIERLLTETVKQSQDAWGGSSDWSEVEG 101

Query: 625  AWVLRPRNSRPTSVVHFIGGIFVGAAPQLTYRLFLERLSEKGVLVIATPYASGFDHFRIA 804
            AWVL+P+NS+P SVVHF+GGIFVGAAPQLTYRLFLERLSE+G+LVIATPYASGFDHF IA
Sbjct: 102  AWVLKPKNSKPRSVVHFVGGIFVGAAPQLTYRLFLERLSERGILVIATPYASGFDHFFIA 161

Query: 805  DEAQFKFDRCVRSLQD-ISDLPTFGIGHSLGSVVHLLIGARYAIQRSGNVLMSFNNKEAS 981
            DE QFKFDRC+R LQ+ + DLPTFGIGHSLGSV+HLLIG+RYA+QRSGNVLM+FNNKEAS
Sbjct: 162  DEVQFKFDRCLRFLQETVQDLPTFGIGHSLGSVIHLLIGSRYAVQRSGNVLMAFNNKEAS 221

Query: 982  SAVPLFSPVIVPMAQSFGPVISQLISSPTVRFGAEMAMKQFETLSPPIMKXXXXXXXXXX 1161
             A+PLFSPV+VPMAQS GP++SQ+ SSPTVR GAEM +KQ E LSPPIMK          
Sbjct: 222  LAIPLFSPVLVPMAQSIGPLLSQIASSPTVRLGAEMTLKQLENLSPPIMKQVIPLVEQLP 281

Query: 1162 XXYMDLAEGREDFIPKPEETRRLVKSYYG 1248
              YMDL +GREDF PKPEETRRL+KSYYG
Sbjct: 282  PLYMDLVKGREDFAPKPEETRRLIKSYYG 310


>emb|CBI29306.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  395 bits (1016), Expect = e-107
 Identities = 191/261 (73%), Positives = 221/261 (84%), Gaps = 1/261 (0%)
 Frame = +1

Query: 469  RIFCYQDETENKPRSEAAGIQLYGEIEKLMTETAKRSQDGWGVSGDWREVEGAWVLRPRN 648
            RI+C  D++  K +SE  GIQ+Y +IE+L+TET K+SQD WG S DW EVEGAWVL+P+N
Sbjct: 55   RIYCNSDDS-GKKQSETTGIQVYSQIERLLTETVKQSQDAWGGSSDWSEVEGAWVLKPKN 113

Query: 649  SRPTSVVHFIGGIFVGAAPQLTYRLFLERLSEKGVLVIATPYASGFDHFRIADEAQFKFD 828
            S+P SVVHF+GGIFVGAAPQLTYRLFLERLSE+G+LVIATPYASGFDHF IADE QFKFD
Sbjct: 114  SKPRSVVHFVGGIFVGAAPQLTYRLFLERLSERGILVIATPYASGFDHFFIADEVQFKFD 173

Query: 829  RCVRSLQD-ISDLPTFGIGHSLGSVVHLLIGARYAIQRSGNVLMSFNNKEASSAVPLFSP 1005
            RC+R LQ+ + DLPTFGIGHSLGSV+HLLIG+RYA+QRSGNVLM+FNNKEAS A+PLFSP
Sbjct: 174  RCLRFLQETVQDLPTFGIGHSLGSVIHLLIGSRYAVQRSGNVLMAFNNKEASLAIPLFSP 233

Query: 1006 VIVPMAQSFGPVISQLISSPTVRFGAEMAMKQFETLSPPIMKXXXXXXXXXXXXYMDLAE 1185
            V+VPMAQS GP++SQ+ SSPTVR GAEM +KQ E LSPPIMK            YMDL +
Sbjct: 234  VLVPMAQSIGPLLSQIASSPTVRLGAEMTLKQLENLSPPIMKQVIPLVEQLPPLYMDLVK 293

Query: 1186 GREDFIPKPEETRRLVKSYYG 1248
            GREDF PKPEETRRL+KSYYG
Sbjct: 294  GREDFAPKPEETRRLIKSYYG 314


>ref|XP_002512715.1| conserved hypothetical protein [Ricinus communis]
            gi|223548676|gb|EEF50167.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 441

 Score =  389 bits (999), Expect = e-105
 Identities = 199/301 (66%), Positives = 234/301 (77%), Gaps = 9/301 (2%)
 Frame = +1

Query: 373  LLQFQTNGFCNSSNHR-FLKVRPHLRSSTVP----PGRIFCYQDETENKPR---SEAAGI 528
            L QF+ N F   S+HR   + R HL  +  P      RI+C  D+   KP    S ++GI
Sbjct: 14   LNQFR-NRFIGLSDHRPHERRRCHLVVADGPRHSRTARIYCNYDDATRKPNPSSSSSSGI 72

Query: 529  QLYGEIEKLMTETAKRSQDGWGVSGDWREVEGAWVLRPRNSRPTSVVHFIGGIFVGAAPQ 708
            +LYG+IE+L+TET ++SQD WG   DW E+EGAWVL+PR+S P SVVHF+GGIFVGAAPQ
Sbjct: 73   KLYGQIERLLTETVRQSQDAWGGLKDWTEIEGAWVLKPRSSPPKSVVHFVGGIFVGAAPQ 132

Query: 709  LTYRLFLERLSEKGVLVIATPYASGFDHFRIADEAQFKFDRCVRSLQD-ISDLPTFGIGH 885
            LTYRLFLERL+EKG+LVIATPYASGFDHF IADE QFKFDRC R+LQ+ + DLPTFGIGH
Sbjct: 133  LTYRLFLERLAEKGILVIATPYASGFDHFFIADEVQFKFDRCFRALQETVQDLPTFGIGH 192

Query: 886  SLGSVVHLLIGARYAIQRSGNVLMSFNNKEASSAVPLFSPVIVPMAQSFGPVISQLISSP 1065
            SLGSV+HLLIG+RYA+QR GNVLM+FNNKEASSA+PLFSPV+VP+AQS GP +S++ SSP
Sbjct: 193  SLGSVIHLLIGSRYAVQRGGNVLMAFNNKEASSAIPLFSPVLVPVAQSIGPFLSEITSSP 252

Query: 1066 TVRFGAEMAMKQFETLSPPIMKXXXXXXXXXXXXYMDLAEGREDFIPKPEETRRLVKSYY 1245
            TVR GAEM  KQ E LSPPIMK            YMDL +GREDF PKPEETRRL+KSYY
Sbjct: 253  TVRLGAEMTFKQLENLSPPIMKQVLPLVEQLPPLYMDLVKGREDFSPKPEETRRLIKSYY 312

Query: 1246 G 1248
            G
Sbjct: 313  G 313


>ref|XP_002303731.1| predicted protein [Populus trichocarpa] gi|222841163|gb|EEE78710.1|
            predicted protein [Populus trichocarpa]
          Length = 441

 Score =  387 bits (993), Expect = e-105
 Identities = 198/299 (66%), Positives = 233/299 (77%), Gaps = 15/299 (5%)
 Frame = +1

Query: 397  FCNSSNHRFLKVRPHLRSSTVP------PGRIFC-YQDETENKPR-------SEAAGIQL 534
            F   SNH+   V  HL ++  P        RIFC Y+D  +  P+       S ++ IQL
Sbjct: 20   FIGFSNHKNQLV--HLLAANGPRKCNTRSSRIFCTYEDPVKKPPQPSPSSSSSSSSAIQL 77

Query: 535  YGEIEKLMTETAKRSQDGWGVSGDWREVEGAWVLRPRNSRPTSVVHFIGGIFVGAAPQLT 714
            Y +IE+L+TET+++SQD WG S DW EVEG+WVL+P++SRP SVVHFIGGIFVGAAPQLT
Sbjct: 78   YNQIERLLTETSRQSQDYWGGSKDWSEVEGSWVLKPKSSRPKSVVHFIGGIFVGAAPQLT 137

Query: 715  YRLFLERLSEKGVLVIATPYASGFDHFRIADEAQFKFDRCVRSLQD-ISDLPTFGIGHSL 891
            YRLFLERL+EKGVLVIATPYASGFD+F IADE QFKFDRC+R LQ+ + D+PTFGIGHSL
Sbjct: 138  YRLFLERLAEKGVLVIATPYASGFDYFFIADEVQFKFDRCLRFLQETVQDVPTFGIGHSL 197

Query: 892  GSVVHLLIGARYAIQRSGNVLMSFNNKEASSAVPLFSPVIVPMAQSFGPVISQLISSPTV 1071
            GSV+HLLIG+RYA+QRSGN+LM+FNNKEASSA+PLFSPV+VP+AQSFGP +SQ+ SSPTV
Sbjct: 198  GSVIHLLIGSRYAVQRSGNILMAFNNKEASSAIPLFSPVLVPVAQSFGPFLSQIASSPTV 257

Query: 1072 RFGAEMAMKQFETLSPPIMKXXXXXXXXXXXXYMDLAEGREDFIPKPEETRRLVKSYYG 1248
            R GAEM MKQ E  SPPIMK            YMDL  GREDF PKPEETRRL+KSYYG
Sbjct: 258  RLGAEMTMKQLENFSPPIMKQVFPLVEQLPPLYMDLVNGREDFSPKPEETRRLIKSYYG 316


>ref|NP_199597.1| uncharacterized protein [Arabidopsis thaliana]
            gi|10177922|dbj|BAB11333.1| unnamed protein product
            [Arabidopsis thaliana] gi|16648766|gb|AAL25574.1|
            AT5g47860/MCA23_20 [Arabidopsis thaliana]
            gi|22655374|gb|AAM98279.1| At5g47860/MCA23_20
            [Arabidopsis thaliana] gi|332008198|gb|AED95581.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 431

 Score =  385 bits (989), Expect = e-104
 Identities = 186/262 (70%), Positives = 218/262 (83%), Gaps = 2/262 (0%)
 Frame = +1

Query: 469  RIFCYQDETE-NKPRSEAAGIQLYGEIEKLMTETAKRSQDGWGVSGDWREVEGAWVLRPR 645
            R+FC   E + N+ R+++ GIQ+YGEIE+L+TET K SQ   G S DW EVEGAWVL+PR
Sbjct: 42   RVFCSSKENDINRDRNQSTGIQVYGEIERLLTETVKNSQSSSGGSSDWSEVEGAWVLKPR 101

Query: 646  NSRPTSVVHFIGGIFVGAAPQLTYRLFLERLSEKGVLVIATPYASGFDHFRIADEAQFKF 825
            NS+P  VVHFIGGIFVGAAPQLTYRLFLERL+EK VLVIATPYASGFDHF IADE QFK+
Sbjct: 102  NSKPKMVVHFIGGIFVGAAPQLTYRLFLERLAEKDVLVIATPYASGFDHFNIADEVQFKY 161

Query: 826  DRCVRSLQD-ISDLPTFGIGHSLGSVVHLLIGARYAIQRSGNVLMSFNNKEASSAVPLFS 1002
            DRC RSLQ+ + DLP+FGIGHSLGSV+HLLIG+RYA+QR+GNV M+FNNKEAS A+PLFS
Sbjct: 162  DRCCRSLQEEVQDLPSFGIGHSLGSVIHLLIGSRYAVQRNGNVFMAFNNKEASLAIPLFS 221

Query: 1003 PVIVPMAQSFGPVISQLISSPTVRFGAEMAMKQFETLSPPIMKXXXXXXXXXXXXYMDLA 1182
            PV+VPMAQS GP++SQ+ +SPT+R GAEM  KQ ETLSPPIMK            YMDL 
Sbjct: 222  PVLVPMAQSLGPLLSQVATSPTIRLGAEMTRKQLETLSPPIMKQILPLVEQLPPLYMDLV 281

Query: 1183 EGREDFIPKPEETRRLVKSYYG 1248
            +GREDF+PKPEETRRL++SYYG
Sbjct: 282  KGREDFVPKPEETRRLIRSYYG 303


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