BLASTX nr result
ID: Coptis24_contig00000809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000809
(1949 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277256.1| PREDICTED: protein kinase 2B, chloroplastic ... 431 e-171
ref|XP_002520117.1| Protein kinase APK1A, chloroplast precursor,... 429 e-169
ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kina... 429 e-168
ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kina... 429 e-168
ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|2... 429 e-166
>ref|XP_002277256.1| PREDICTED: protein kinase 2B, chloroplastic [Vitis vinifera]
gi|296086406|emb|CBI31995.3| unnamed protein product
[Vitis vinifera]
Length = 420
Score = 431 bits (1107), Expect(2) = e-171
Identities = 216/282 (76%), Positives = 235/282 (83%), Gaps = 2/282 (0%)
Frame = +2
Query: 323 MGNCMDSSARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 502
MGNC+DSSARVD+ +SS + SG SK + R
Sbjct: 1 MGNCLDSSARVDSTQSSHTTSASGASKVVSKTSNSSAPSTLTVPSYSERSTAESFPTP-R 59
Query: 503 TEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGMV 682
+EGEIL SP+LKAF+F+++KNATRNFRPDSLLGEGGFGYVFKGW+DEQTL A +PGSGMV
Sbjct: 60 SEGEILPSPSLKAFSFNDLKNATRNFRPDSLLGEGGFGYVFKGWIDEQTLAAVKPGSGMV 119
Query: 683 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLENH 862
IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL+GYCLEGENRLLVYEFMPKGSLENH
Sbjct: 120 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 179
Query: 863 LFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFGL 1036
LFRRGPQPL W +RI+VAIGAARGL FLHDA QVIYRDFKASNILLD+E+NAKLSDFGL
Sbjct: 180 LFRRGPQPLSWAVRIRVAIGAARGLSFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 239
Query: 1037 AKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSF 1162
AKAGPTGD THVSTQVMGT GYAAPEYVATGRL+AKSDVYSF
Sbjct: 240 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSF 281
Score = 201 bits (510), Expect(2) = e-171
Identities = 95/129 (73%), Positives = 112/129 (86%)
Frame = +3
Query: 1233 DVYSFGVVLLELLSGRRALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKG 1412
DVYSFGVVLLELLSGRRA+DK+KIG+EQNLVDWAKPYL DKR+LFR+MD+KLEGQYPQKG
Sbjct: 277 DVYSFGVVLLELLSGRRAVDKTKIGVEQNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKG 336
Query: 1413 AYLAANLALQCITNEGKARPPMSEVLATLEQLQTPKNVPKHSHLDQKRLSYPVRRSPMKN 1592
A++AA LALQC+ E K RP MSEVLATLEQ+Q+PKN KH +Q +S PV++SP++
Sbjct: 337 AFMAATLALQCLNTEAKVRPRMSEVLATLEQIQSPKNAAKHIQSEQHTVSIPVQKSPLRQ 396
Query: 1593 QPSPLNLTP 1619
Q SPLNLTP
Sbjct: 397 QHSPLNLTP 405
>ref|XP_002520117.1| Protein kinase APK1A, chloroplast precursor, putative [Ricinus
communis] gi|223540609|gb|EEF42172.1| Protein kinase
APK1A, chloroplast precursor, putative [Ricinus communis]
Length = 419
Score = 429 bits (1103), Expect(2) = e-169
Identities = 219/283 (77%), Positives = 235/283 (83%), Gaps = 3/283 (1%)
Frame = +2
Query: 323 MGNCMDSSA-RVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 499
MGNC+DSSA +VDT + S HT SG S+ + R
Sbjct: 1 MGNCLDSSAAKVDTTQGS--HTPSGASRISSRTSRSSVPSSLTIPSYSERSSSECLPTP- 57
Query: 500 RTEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGM 679
RTEGEILSSPNLKAF F+E+KNATRNFRPDSLLGEGGFGYVFKGW+DE TL+AARPGSGM
Sbjct: 58 RTEGEILSSPNLKAFCFNELKNATRNFRPDSLLGEGGFGYVFKGWIDEHTLSAARPGSGM 117
Query: 680 VIAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLEN 859
V+AVKKLKPEGFQGHKEWLTEV YLGQLHHPNLVKL+GYCLEGENRLLVYEFMPKGSLEN
Sbjct: 118 VVAVKKLKPEGFQGHKEWLTEVRYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
Query: 860 HLFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFG 1033
HLFRRGPQPL W +RIKVA+GAARGL FLHDA QVIYRDFKASNILLD+E+NAKLSDFG
Sbjct: 178 HLFRRGPQPLSWAVRIKVAVGAARGLSFLHDAKSQVIYRDFKASNILLDAEFNAKLSDFG 237
Query: 1034 LAKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSF 1162
LAK GPTGD THVSTQVMGT GYAAPEYVATGRL+AKSDVYSF
Sbjct: 238 LAKEGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSF 280
Score = 195 bits (495), Expect(2) = e-169
Identities = 93/129 (72%), Positives = 111/129 (86%)
Frame = +3
Query: 1233 DVYSFGVVLLELLSGRRALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKG 1412
DVYSFGVVLLELLSGRRA+DK+K+GIEQNLVDWAKPYL+DKRKLFR+MD+KL GQYPQK
Sbjct: 276 DVYSFGVVLLELLSGRRAVDKTKVGIEQNLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKS 335
Query: 1413 AYLAANLALQCITNEGKARPPMSEVLATLEQLQTPKNVPKHSHLDQKRLSYPVRRSPMKN 1592
A++AANLALQC++ E KARP MSEVLATLEQ+++PK + SH + + PVR+SPM+
Sbjct: 336 AHMAANLALQCLSTEAKARPRMSEVLATLEQIESPKTAGRLSHSEHPSIQIPVRKSPMRQ 395
Query: 1593 QPSPLNLTP 1619
SPLNLTP
Sbjct: 396 HHSPLNLTP 404
>ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B, chloroplastic-like
[Glycine max]
Length = 414
Score = 429 bits (1102), Expect(2) = e-168
Identities = 214/282 (75%), Positives = 236/282 (83%), Gaps = 2/282 (0%)
Frame = +2
Query: 323 MGNCMDSSARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 502
MGNC+DSSA+VD A+SS + SG SK T R
Sbjct: 1 MGNCLDSSAKVDAAQSSRSTSASGISKTT---------PSSLSIPSYSEKSNASSLPTPR 51
Query: 503 TEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGMV 682
+EGEILSSPNLK FTF+E+KNATRNFRPDSLLGEGGFGYV+KGW+DE T TA++PGSGMV
Sbjct: 52 SEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMV 111
Query: 683 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLENH 862
+AVK+LKPEGFQGHKEWLTEVNYLGQL+HPNLVKL+GYCLEGENRLLVYEFMPKGSLENH
Sbjct: 112 VAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 171
Query: 863 LFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFGL 1036
LFRRGPQPL W +R+KVAIGAARGL FLH+A QVIYRDFKASNILLD+E+N+KLSDFGL
Sbjct: 172 LFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLSDFGL 231
Query: 1037 AKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSF 1162
AKAGPTGD THVSTQVMGTQGYAAPEYVATGRL+AKSDVYSF
Sbjct: 232 AKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSF 273
Score = 192 bits (489), Expect(2) = e-168
Identities = 93/129 (72%), Positives = 112/129 (86%)
Frame = +3
Query: 1233 DVYSFGVVLLELLSGRRALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKG 1412
DVYSFGVVLLELLSGRRA+DK+ G+EQNLVDWAKPYL+DKR+LFR+MD+KLEGQYPQKG
Sbjct: 269 DVYSFGVVLLELLSGRRAVDKTITGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKG 328
Query: 1413 AYLAANLALQCITNEGKARPPMSEVLATLEQLQTPKNVPKHSHLDQKRLSYPVRRSPMKN 1592
A+ AA LALQC+ +E KARPPM+EVLATLEQ++ PK ++SH + RL PVR+SP +N
Sbjct: 329 AFTAATLALQCLNSEAKARPPMTEVLATLEQIEAPKTAGRNSHSEHHRLQTPVRKSPARN 388
Query: 1593 QPSPLNLTP 1619
+ SPLNLTP
Sbjct: 389 R-SPLNLTP 396
>ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B, chloroplastic-like
[Glycine max]
Length = 422
Score = 429 bits (1103), Expect(2) = e-168
Identities = 214/282 (75%), Positives = 236/282 (83%), Gaps = 2/282 (0%)
Frame = +2
Query: 323 MGNCMDSSARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 502
MGNC+DSSA+VD A+SS + SG SK T R
Sbjct: 1 MGNCLDSSAKVDAAQSSKSTSASGISKTT---------PSSLSIPSYSEKSNASSLPTPR 51
Query: 503 TEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGMV 682
+EGEILSSPNLK FTF+E+KNATRNFRPDSLLGEGGFGYV+KGW+DE T TA++PGSGMV
Sbjct: 52 SEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMV 111
Query: 683 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLENH 862
+AVK+LKPEGFQGHKEWLTEVNYLGQL+HPNLVKL+GYCLEGENRLLVYEFMPKGSLENH
Sbjct: 112 VAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 171
Query: 863 LFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFGL 1036
LFRRGPQPL W +R+KVAIGAARGL FLH+A QVIYRDFKASNILLD+E+N+KLSDFGL
Sbjct: 172 LFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLSDFGL 231
Query: 1037 AKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSF 1162
AKAGPTGD THVSTQVMGTQGYAAPEYVATGRL+AKSDVYSF
Sbjct: 232 AKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSF 273
Score = 191 bits (486), Expect(2) = e-168
Identities = 92/129 (71%), Positives = 112/129 (86%)
Frame = +3
Query: 1233 DVYSFGVVLLELLSGRRALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKG 1412
DVYSFGVVLLELLSGRRA+DK+ G+EQNLVDWAKPYL+DKR+LFR+MD+KLEGQYPQKG
Sbjct: 269 DVYSFGVVLLELLSGRRAVDKTITGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKG 328
Query: 1413 AYLAANLALQCITNEGKARPPMSEVLATLEQLQTPKNVPKHSHLDQKRLSYPVRRSPMKN 1592
A+ AA LALQC+ +E KARPPM+EVLATLEQ++ PK ++SH + R+ PVR+SP +N
Sbjct: 329 AFTAATLALQCLNSEAKARPPMTEVLATLEQIEAPKTAGRNSHSEHHRVQTPVRKSPARN 388
Query: 1593 QPSPLNLTP 1619
+ SPLNLTP
Sbjct: 389 R-SPLNLTP 396
>ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|222864839|gb|EEF01970.1|
predicted protein [Populus trichocarpa]
Length = 417
Score = 429 bits (1103), Expect(2) = e-166
Identities = 220/283 (77%), Positives = 237/283 (83%), Gaps = 3/283 (1%)
Frame = +2
Query: 323 MGNCMDSS-ARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 499
MGNC+DSS A+VD+ +SS N G S+ + R
Sbjct: 1 MGNCLDSSSAKVDSTQSSH---NPGASRISSRTSHSSVPSSLTIPSYSGRSSECLPTP-- 55
Query: 500 RTEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGM 679
R+EGEILSSPNLKAF+F+E+KNATRNFRPDSLLGEGGFGYVFKGW+DE TLTAA+PGSGM
Sbjct: 56 RSEGEILSSPNLKAFSFNELKNATRNFRPDSLLGEGGFGYVFKGWIDEHTLTAAKPGSGM 115
Query: 680 VIAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLEN 859
V+AVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL+GYCLEGENRLLVYEFMPKGSLEN
Sbjct: 116 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 175
Query: 860 HLFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFG 1033
HLFRRGPQPL W IRIKVAIGAARGL FLHDA QVIYRDFKASNILLD+E+NAKLSDFG
Sbjct: 176 HLFRRGPQPLSWAIRIKVAIGAARGLSFLHDAKSQVIYRDFKASNILLDAEFNAKLSDFG 235
Query: 1034 LAKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSF 1162
LAKAGPTGD THVSTQVMGT GYAAPEYVATGRL+AKSDVYSF
Sbjct: 236 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSF 278
Score = 183 bits (465), Expect(2) = e-166
Identities = 86/125 (68%), Positives = 106/125 (84%)
Frame = +3
Query: 1233 DVYSFGVVLLELLSGRRALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKG 1412
DVYSFGVVLLE LSGRRA+DKSK+G+EQNLVDW KPYL DKRKLFR+MD+KL GQYPQKG
Sbjct: 274 DVYSFGVVLLEFLSGRRAVDKSKVGVEQNLVDWVKPYLGDKRKLFRIMDTKLGGQYPQKG 333
Query: 1413 AYLAANLALQCITNEGKARPPMSEVLATLEQLQTPKNVPKHSHLDQKRLSYPVRRSPMKN 1592
A++AANLALQC++ E K RP MSEVLATLEQ+++PK K+ L+ + + PVR+SPM++
Sbjct: 334 AFMAANLALQCLSTEAKVRPRMSEVLATLEQIESPKGAVKNIQLEHQTVQTPVRQSPMRH 393
Query: 1593 QPSPL 1607
SP+
Sbjct: 394 HRSPV 398