BLASTX nr result

ID: Coptis24_contig00000806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000806
         (2289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-25
ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-24
ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   118   8e-24
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              118   8e-24
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   118   8e-24

>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  121 bits (304), Expect = 7e-25
 Identities = 61/146 (41%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
 Frame = -3

Query: 724  TGNQCYKAIEDVEKETVP-QAFLVDHRSDEVTFENGSLPFTKSYPLWGNVESMEVFRLMP 548
            TG       E  EK+ V  Q+  VD +S++   EN  +PF K  P+W  +ESMEVF+++P
Sbjct: 692  TGRIASGVSEAREKKVVAVQSCTVDPKSNDTMVENQLVPFVKKSPVWNTIESMEVFQIIP 751

Query: 547  QHPHFHPLQQVNELLREGQALGYMLTFANVIDKVNKAQLDEPYSTFENELETLIELEANG 368
            Q PHFHPL +  E  REG A+G M+TFA++ +K++  Q D+  S  E+ LE+L++LE +G
Sbjct: 752  QKPHFHPLTECKEEYREGSAIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEKHG 811

Query: 367  FNVHPVRARIKKLLRIKDTRARLHEE 290
            F++   R R+ +LL IKD +  +  E
Sbjct: 812  FDITVPRCRLNELLSIKDGQGEVINE 837


>ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|222861056|gb|EEE98598.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  119 bits (299), Expect = 3e-24
 Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
 Frame = -3

Query: 739 EGHTDTGNQCYKAIEDVEKETVP-QAFLVDHRSDEVTFENGSLPFTKSYPLWGNVESMEV 563
           E  + TG       E  EK+ V  ++  +D + ++   EN S+PF K  P+W  +ESMEV
Sbjct: 38  ELRSSTGRAASGGSEAREKQAVAVESCTIDAKGNDTLVENQSVPFVKRSPVWNTIESMEV 97

Query: 562 FRLMPQHPHFHPLQQVNELLREGQALGYMLTFANVIDKVNKAQLDEPYSTFENELETLIE 383
           FR +PQ  HFHPL +  E  REG A+G M+TFA++ DK+   Q D+  S  E+ LE+L++
Sbjct: 98  FRAIPQKLHFHPLTECKEEYREGSAIGIMVTFASLFDKITSLQFDDCRSILESTLESLLD 157

Query: 382 LEANGFNVHPVRARIKKLLRIKDTRARLHEE 290
           LE +GF++   R R+ +LL IKD +  +  E
Sbjct: 158 LEKHGFDITVPRGRLNELLSIKDGQGEVLNE 188


>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  118 bits (295), Expect = 8e-24
 Identities = 63/142 (44%), Positives = 91/142 (64%)
 Frame = -3

Query: 724  TGNQCYKAIEDVEKETVPQAFLVDHRSDEVTFENGSLPFTKSYPLWGNVESMEVFRLMPQ 545
            T NQ  +A E      V Q+  +D   + +   N SLPF KS P+W  +E++EVF+ MPQ
Sbjct: 993  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 1050

Query: 544  HPHFHPLQQVNELLREGQALGYMLTFANVIDKVNKAQLDEPYSTFENELETLIELEANGF 365
             PHF PL+   E  REG A+G M+TF+ +I+KV K + D+P S F + LE L+ELE +GF
Sbjct: 1051 KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 1110

Query: 364  NVHPVRARIKKLLRIKDTRARL 299
            +  PV++RI +L+ IKD + +L
Sbjct: 1111 DTKPVQSRINELVFIKDQQEQL 1132


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  118 bits (295), Expect = 8e-24
 Identities = 63/142 (44%), Positives = 91/142 (64%)
 Frame = -3

Query: 724  TGNQCYKAIEDVEKETVPQAFLVDHRSDEVTFENGSLPFTKSYPLWGNVESMEVFRLMPQ 545
            T NQ  +A E      V Q+  +D   + +   N SLPF KS P+W  +E++EVF+ MPQ
Sbjct: 853  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 910

Query: 544  HPHFHPLQQVNELLREGQALGYMLTFANVIDKVNKAQLDEPYSTFENELETLIELEANGF 365
             PHF PL+   E  REG A+G M+TF+ +I+KV K + D+P S F + LE L+ELE +GF
Sbjct: 911  KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 970

Query: 364  NVHPVRARIKKLLRIKDTRARL 299
            +  PV++RI +L+ IKD + +L
Sbjct: 971  DTKPVQSRINELVFIKDQQEQL 992


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  118 bits (295), Expect = 8e-24
 Identities = 63/142 (44%), Positives = 91/142 (64%)
 Frame = -3

Query: 724  TGNQCYKAIEDVEKETVPQAFLVDHRSDEVTFENGSLPFTKSYPLWGNVESMEVFRLMPQ 545
            T NQ  +A E      V Q+  +D   + +   N SLPF KS P+W  +E++EVF+ MPQ
Sbjct: 975  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 1032

Query: 544  HPHFHPLQQVNELLREGQALGYMLTFANVIDKVNKAQLDEPYSTFENELETLIELEANGF 365
             PHF PL+   E  REG A+G M+TF+ +I+KV K + D+P S F + LE L+ELE +GF
Sbjct: 1033 KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 1092

Query: 364  NVHPVRARIKKLLRIKDTRARL 299
            +  PV++RI +L+ IKD + +L
Sbjct: 1093 DTKPVQSRINELVFIKDQQEQL 1114


Top