BLASTX nr result
ID: Coptis24_contig00000794
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000794 (2558 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 179 e-101 dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 164 3e-90 gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 128 5e-79 emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 140 2e-73 emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera] 149 5e-65 >gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] Length = 1415 Score = 179 bits (454), Expect(3) = e-101 Identities = 82/169 (48%), Positives = 116/169 (68%) Frame = +1 Query: 1378 STSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHVETNVG 1557 + +C +T W++D+GA+YHVTP + FFT+Y+ G++GE+RMGN G K+ G G V +ET+ G Sbjct: 281 NVACHETTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGTGTVCLETSNG 340 Query: 1558 YTLTLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQ 1737 L LK+V+H PDIRL+LIS GKLDDDGF FG+G WK+++GS+V ARG K+ +LY Q Sbjct: 341 TKLVLKNVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQ 400 Query: 1738 ASLCKXXXXXXXXXXXXXLWHKRLCHMGIKGMEVLAKQKAMPDIKGTHL 1884 +S+ LWHKRL HM +KG++ LAK+ + +K L Sbjct: 401 SSVSDDSVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKL 449 Score = 134 bits (338), Expect(3) = e-101 Identities = 57/82 (69%), Positives = 74/82 (90%) Frame = +3 Query: 2004 LVHTDLCGPMRVKSHQGASYFLTFIDDASRKIWAYSLKTKDEVLGVFEKFHSMVERETGK 2183 L+H+D+CGPM+V+S GASYF+TFIDD SRK+W Y+LK K +VLGVF++FH++VER+TGK Sbjct: 479 LIHSDVCGPMKVRSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVERQTGK 538 Query: 2184 LLKCIRSDNGGEYIGPFEEYCQ 2249 LKCIR+DNGGEY GPF+EYC+ Sbjct: 539 KLKCIRTDNGGEYCGPFDEYCR 560 Score = 105 bits (262), Expect(3) = e-101 Identities = 46/76 (60%), Positives = 60/76 (78%) Frame = +1 Query: 2329 EQTVPKTPQQNGIAERMNRTIVERIRCMLSHSKLPRSYWVEAMRTAVHVINLSPAKPLNS 2508 ++T PK PQ NG+AERMNRTI+ER+RCML +KLP S+W EA+ TAVHVINLSP L + Sbjct: 567 QKTPPKIPQLNGLAERMNRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSPVIALKN 626 Query: 2509 DYPERVWSGRDVDYGY 2556 + P++VW G+DV Y + Sbjct: 627 EVPDKVWCGKDVSYDH 642 Score = 145 bits (365), Expect = 7e-32 Identities = 87/279 (31%), Positives = 140/279 (50%), Gaps = 1/279 (0%) Frame = +3 Query: 390 TRMMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAXXXXXXXXXXXXXXXX 569 + M+ LN +NY IWKAKM+DLL+ K L LP+ +DE Sbjct: 6 SNMVRLNGRNYHIWKAKMKDLLFVKKLHLPVFASAKPENMSDEEWDFEHQQVCGYIRQWV 65 Query: 570 XXXXXXXXXXXDDSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEGS 749 +D+V +H+ ET A SLW KLE LY K+G NK+ ++K+ + +Y+EG+ Sbjct: 66 -----------EDNVLNHIINETHARSLWNKLETLYASKTGNNKLFLLKQMMNIRYREGT 114 Query: 750 SMSEHLNEVQNIINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTMEM 929 +++H+N+ Q +++Q+ M I DEV L+LL +LP+SWET VSL +A +G+VTME Sbjct: 115 LINDHVNDFQGVLDQLSGMGIKFEDEVLGLWLLNTLPDSWETFRVSLTNSAPNGVVTMEY 174 Query: 930 ATTSLLNEET-XXXXXXXXXXXEVLFTEXXXXXXXXXXXXXXXXXXXXXXXEARTPKAER 1106 + +LNEE ++L T+ ++R+ + Sbjct: 175 VKSGILNEEARRRSQDTSTSQSDILVTD-----DRGRNKQKGQRGRDKSRSKSRSRYKDI 229 Query: 1107 QCYYCATKGHFRYECRTLKRDEKNNCVHEDMVQRNGNTG 1223 +C+YC K H + KR++K + ++G+TG Sbjct: 230 ECHYCGKKSHIKKYSFKWKREKKQD-------NKDGDTG 261 >dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] Length = 1338 Score = 164 bits (414), Expect(3) = 3e-90 Identities = 78/165 (47%), Positives = 108/165 (65%) Frame = +1 Query: 1390 QDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHVETNVGYTLT 1569 Q+ WVID+GA+ H TP R F++Y+ G++G V+MGN+ S ++G GDV +ET G L Sbjct: 288 QEMTWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMNGMKLL 347 Query: 1570 LKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQASLC 1749 L+DVRHVPD+RL+LIS KLD++G+ N+F NG WKL++GS++ ARG K LY TQAS+ Sbjct: 348 LRDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASIS 407 Query: 1750 KXXXXXXXXXXXXXLWHKRLCHMGIKGMEVLAKQKAMPDIKGTHL 1884 + LWH+RL HM K M L K+ A+P + L Sbjct: 408 QQVINVAENDSNIKLWHRRLGHMSEKSMARLVKKNALPGLNQIQL 452 Score = 116 bits (290), Expect(3) = 3e-90 Identities = 54/82 (65%), Positives = 67/82 (81%) Frame = +3 Query: 2004 LVHTDLCGPMRVKSHQGASYFLTFIDDASRKIWAYSLKTKDEVLGVFEKFHSMVERETGK 2183 LVH+D+CGP + KS GA YF+TFIDD SRK W Y+LKTKD+V VF++F ++VERETGK Sbjct: 482 LVHSDVCGPFK-KSLGGARYFVTFIDDHSRKTWVYTLKTKDQVFQVFKQFLTLVERETGK 540 Query: 2184 LLKCIRSDNGGEYIGPFEEYCQ 2249 LKCIR+DNGGEY G F+ YC+ Sbjct: 541 KLKCIRTDNGGEYQGQFDAYCK 562 Score = 102 bits (255), Expect(3) = 3e-90 Identities = 44/72 (61%), Positives = 57/72 (79%) Frame = +1 Query: 2335 TVPKTPQQNGIAERMNRTIVERIRCMLSHSKLPRSYWVEAMRTAVHVINLSPAKPLNSDY 2514 T PKTPQ NG+AERMNRT++ER RC+LSHSKLP+++W EA+ TA +V+N SP PL Sbjct: 571 TPPKTPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKA 630 Query: 2515 PERVWSGRDVDY 2550 PE++W GRD+ Y Sbjct: 631 PEKIWLGRDISY 642 Score = 149 bits (376), Expect = 4e-33 Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 1/265 (0%) Frame = +3 Query: 390 TRMMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAXXXXXXXXXXXXXXXX 569 ++M++LN NY +W+ KM+DLL+ + LP+ + +K+DE Sbjct: 6 SKMVNLNGTNYHLWRNKMKDLLFVTKMHLPVFSSQKPEDKSDE-----------DWEFEH 54 Query: 570 XXXXXXXXXXXDDSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEGS 749 +D+V++H++ T A SLW KLE+LY K+G NK+ + K KY EG+ Sbjct: 55 NQVCGYIRQFVEDNVYNHISGVTHARSLWDKLEELYASKTGNNKLFYLTKLMQVKYVEGT 114 Query: 750 SMSEHLNEVQNIINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTMEM 929 ++++HLNE+Q I++Q+ M I DEV AL +L +LPESWETL VS+ +A +G+V ME Sbjct: 115 TVADHLNEIQGIVDQLSGMGIKFDDEVLALMVLATLPESWETLKVSITNSAPNGVVNMET 174 Query: 930 ATTSLLNEETXXXXXXXXXXXEVLFTEXXXXXXXXXXXXXXXXXXXXXXXEARTPK-AER 1106 + +LNEE ++ ++ K A Sbjct: 175 VKSGILNEEMRRRSQGTSS------SQSEVLAVTTRGRSQNKSQSNRDKSRGKSNKFANV 228 Query: 1107 QCYYCATKGHFRYECRTLKRDEKNN 1181 +C+YC KGH + CR + D+K N Sbjct: 229 ECHYCKKKGHIKRFCRQFQNDQKKN 253 >gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] Length = 1556 Score = 128 bits (322), Expect(3) = 5e-79 Identities = 54/82 (65%), Positives = 70/82 (85%) Frame = +3 Query: 2004 LVHTDLCGPMRVKSHQGASYFLTFIDDASRKIWAYSLKTKDEVLGVFEKFHSMVERETGK 2183 LVH+D+CGP++VKS G YF+TFIDD SRK+W Y+LKTKD+VL F++FH +VER++GK Sbjct: 476 LVHSDVCGPLKVKSFTGTIYFVTFIDDCSRKLWVYALKTKDQVLAKFKEFHVLVERQSGK 535 Query: 2184 LLKCIRSDNGGEYIGPFEEYCQ 2249 LKCIR+DNGGEY GPF+ YC+ Sbjct: 536 KLKCIRTDNGGEYCGPFDAYCK 557 Score = 109 bits (273), Expect(3) = 5e-79 Identities = 48/76 (63%), Positives = 64/76 (84%) Frame = +1 Query: 2329 EQTVPKTPQQNGIAERMNRTIVERIRCMLSHSKLPRSYWVEAMRTAVHVINLSPAKPLNS 2508 E+T PKTPQ NG+AERMNRT++ER+RCMLS +KLP+ +W EA+ TAVHVINLSPA LN+ Sbjct: 564 EKTPPKTPQLNGLAERMNRTLIERVRCMLSKAKLPKHFWGEALYTAVHVINLSPAIALNA 623 Query: 2509 DYPERVWSGRDVDYGY 2556 + P++VW G++V Y + Sbjct: 624 EVPDKVWFGKNVKYDH 639 Score = 107 bits (266), Expect(3) = 5e-79 Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 1/130 (0%) Frame = +1 Query: 1498 NSGVS-KIIGIGDVHVETNVGYTLTLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWK 1674 +SGV+ +IGI DV ++TN+G L L+ V+H PD+R +L+S LDD GF N FG G WK Sbjct: 319 DSGVTLHVIGIADVCLQTNMGMQLLLRGVKHAPDVRFNLLSVQMLDDSGFENHFGLGKWK 378 Query: 1675 LSRGSIVAARGKKTCSLYKTQASLCKXXXXXXXXXXXXXLWHKRLCHMGIKGMEVLAKQK 1854 LSRG+++ A+G + LY T+A + K LWH+RL H+ KG+ LAK+ Sbjct: 379 LSRGNLIVAKGDRISKLYWTKALVAK--DSVNAMDMDASLWHRRLSHISEKGLNCLAKKD 436 Query: 1855 AMPDIKGTHL 1884 + +K L Sbjct: 437 VLSGLKNAEL 446 Score = 73.9 bits (180), Expect = 2e-10 Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 6/174 (3%) Frame = +3 Query: 675 YERKSGGNK-VLVVKK-----FADTKYQEGSSMSEHLNEVQNIINQMHLMKINLGDEVEA 836 Y ++G K +L VKK FA K ++ + Q +Q+ M I DEV Sbjct: 104 YRPRTGKMKDLLFVKKLHLPVFATEKPKDKTDEEWKFEHQQGFRDQLSQMGIKFDDEVLG 163 Query: 837 LFLLGSLPESWETLAVSLHGAAKDGIVTMEMATTSLLNEETXXXXXXXXXXXEVLFTEXX 1016 L+LL +LP+SWET VS+ ++ DG+V++E +S+LNEE EVLFTE Sbjct: 164 LWLLNTLPDSWETFRVSITNSSPDGVVSLENVKSSVLNEEMRRKAHGTSSHSEVLFTE-- 221 Query: 1017 XXXXXXXXXXXXXXXXXXXXXEARTPKAERQCYYCATKGHFRYECRTLKRDEKN 1178 ++++ +C+YC GH + C K++ K+ Sbjct: 222 --NRGRSQKKELKGSKQNSRSKSKSRYKNVECHYCHKTGHIQRNCFLWKKENKD 273 >emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] Length = 776 Score = 140 bits (353), Expect(3) = 2e-73 Identities = 70/167 (41%), Positives = 102/167 (61%) Frame = +1 Query: 1384 SCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHVETNVGYT 1563 +CQD+ WV+DT S+H+T H+ FF++Y+ G +G VRMGN +I+G+ DV +ET++G Sbjct: 368 ACQDSTWVVDTAMSFHITTHKDFFSSYTSGSFGWVRMGNEAKCEIVGMRDVELETSIGCK 427 Query: 1564 LTLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQAS 1743 + KDVRHVP++ SLIS GK DD+G+ + G++ +LYKT+A Sbjct: 428 MVFKDVRHVPEMCFSLISIGKFDDEGYHSHL----------------GEEKNTLYKTKAR 471 Query: 1744 LCKXXXXXXXXXXXXXLWHKRLCHMGIKGMEVLAKQKAMPDIKGTHL 1884 L K LWHKRL H+ KG++VL ++K +P IKGT L Sbjct: 472 LVKGEVNIVENEASTELWHKRLSHISEKGLQVLTRKKFLP-IKGTSL 517 Score = 98.6 bits (244), Expect(3) = 2e-73 Identities = 47/83 (56%), Positives = 62/83 (74%) Frame = +3 Query: 2004 LVHTDLCGPMRVKSHQGASYFLTFIDDASRKIWAYSLKTKDEVLGVFEKFHSMVERETGK 2183 LVH D+C M+ + GA Y++TFIDD SRK+WAY+LK+K + L VF+ FH +ER+TGK Sbjct: 547 LVHFDVC-TMQSNTLGGALYYVTFIDDHSRKVWAYALKSKYQALDVFKDFHVKIERQTGK 605 Query: 2184 LLKCIRSDNGGEYIGPFEEYCQS 2252 LK +R NG EY GPFE+YC+S Sbjct: 606 QLKYVRVYNGHEYRGPFEQYCRS 628 Score = 87.8 bits (216), Expect(3) = 2e-73 Identities = 42/74 (56%), Positives = 57/74 (77%) Frame = +1 Query: 2329 EQTVPKTPQQNGIAERMNRTIVERIRCMLSHSKLPRSYWVEAMRTAVHVINLSPAKPLNS 2508 E+ V KTPQQN +A++MNRTI +RIRCMLSH+KL +S+ EAMRT + +INLSP+ PL Sbjct: 634 EKIVHKTPQQNDVAKKMNRTICDRIRCMLSHAKLLKSFRGEAMRTTIDLINLSPSYPLEG 693 Query: 2509 DYPERVWSGRDVDY 2550 D P+RV + + V + Sbjct: 694 DLPKRVLTRKFVSF 707 >emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera] Length = 579 Score = 149 bits (375), Expect(3) = 5e-65 Identities = 74/167 (44%), Positives = 105/167 (62%) Frame = +1 Query: 1384 SCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHVETNVGYT 1563 +CQD+ WV+DT S+H+T HR FF++Y+ G +G V MGN +I+G+GDV +ET +G Sbjct: 162 ACQDSTWVVDTATSFHITAHRDFFSSYTNGSFGWVXMGNEAKCEIVGMGDVDLETXIGCK 221 Query: 1564 LTLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQAS 1743 L LKDVRHVP +R SLIS GKLDD+G+ + G G WK+++GS+V RGKK +LYK + Sbjct: 222 LVLKDVRHVPXMRFSLISVGKLDDEGYHSHLGEGKWKITKGSLVLXRGKKNNTLYKIEVR 281 Query: 1744 LCKXXXXXXXXXXXXXLWHKRLCHMGIKGMEVLAKQKAMPDIKGTHL 1884 L K +G++VLA++K + +KGT L Sbjct: 282 LVKG-----------------------EGLQVLARKKLL-XVKGTSL 304 Score = 103 bits (258), Expect(3) = 5e-65 Identities = 48/83 (57%), Positives = 65/83 (78%) Frame = +3 Query: 2004 LVHTDLCGPMRVKSHQGASYFLTFIDDASRKIWAYSLKTKDEVLGVFEKFHSMVERETGK 2183 LVH ++C M+ + GA Y++TFIDD SRK+WAY+LK+K +VL VF+ FH +ER+TGK Sbjct: 334 LVHINVC-TMQNNTLGGALYYVTFIDDHSRKVWAYALKSKGQVLNVFKDFHVKIERQTGK 392 Query: 2184 LLKCIRSDNGGEYIGPFEEYCQS 2252 LK +R +NGGEY GPFE+YC+S Sbjct: 393 QLKFVRVNNGGEYKGPFEQYCRS 415 Score = 45.4 bits (106), Expect(3) = 5e-65 Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 5/41 (12%) Frame = +1 Query: 2329 EQTVPKTPQQNGIAERMNRTIVERIRCML-----SHSKLPR 2436 E+ V KTPQQNG+AERMNRTI +RIR + SKL R Sbjct: 421 EKXVXKTPQQNGVAERMNRTICDRIRAFVHVPRDKQSKLDR 461 Score = 92.0 bits (227), Expect = 7e-16 Identities = 49/117 (41%), Positives = 65/117 (55%) Frame = +3 Query: 396 MMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAXXXXXXXXXXXXXXXXXX 575 M+ L NY+IWK +M+D+LYCK+L PIE G KP T E Sbjct: 8 MIKLIASNYSIWKTRMKDILYCKELFEPIECRGYKPITTIE----------DEWKKLNRK 57 Query: 576 XXXXXXXXXDDSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEG 746 D SVFHHVA+E A+SLW+KLE LYERK+ K ++K+ + KY++G Sbjct: 58 TVGXIRQWVDQSVFHHVAKEVDAYSLWQKLESLYERKTTQXKAFIIKRLVNLKYKDG 114