BLASTX nr result

ID: Coptis24_contig00000783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000783
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278692.1| PREDICTED: uncharacterized protein LOC100257...    99   2e-18
gb|AFK45492.1| unknown [Lotus japonicus]                               92   3e-16
ref|XP_002315543.1| predicted protein [Populus trichocarpa] gi|2...    85   3e-14
ref|XP_002311816.1| predicted protein [Populus trichocarpa] gi|2...    85   3e-14
ref|XP_004144965.1| PREDICTED: uncharacterized protein LOC101217...    84   7e-14

>ref|XP_002278692.1| PREDICTED: uncharacterized protein LOC100257948 [Vitis vinifera]
          Length = 188

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 84/218 (38%), Positives = 108/218 (49%), Gaps = 32/218 (14%)
 Frame = -3

Query: 1018 MGTEVLRPQDILNERFRL-PSV---------SRKSFRKQALEKE---------------- 917
            MGTE+LRPQD L ER  + P+V         S K+ R+  +  E                
Sbjct: 1    MGTEILRPQDCLIERMGVSPAVFPRRKAFPGSAKANRRPVVRAERSDQKRRGSQSEGSIS 60

Query: 916  ---SKKPVAAPVKNLVLGQVKILKRGEPLDLKKKNSLGKSENVLRKSFSEEIFSVXXXXX 746
               S   V A   N+V+G V IL+RGE LD K K+        L+K+  EE+        
Sbjct: 61   KRSSSDDVRAAKGNVVVGPVTILRRGESLDSKLKSE------ALKKNGEEEM-------- 106

Query: 745  XXXNLRKTFSGEIVVG-RRIGPDPELVP--IRLSDLKKSFPNRCSDNNDDVYAGSVCYTS 575
                        IV G  R+GPDPE+VP  IR+ DLK    +  +    D+YAGS    S
Sbjct: 107  ------------IVSGTERLGPDPEMVPKQIRIKDLKPFAFSVAA--KPDMYAGSAFALS 152

Query: 574  PSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 461
            PSP  LPLP+F  +K+  + P VDD ATKDLRRLLR+D
Sbjct: 153  PSPSSLPLPSFSRKKQ--MSPVVDDWATKDLRRLLRLD 188


>gb|AFK45492.1| unknown [Lotus japonicus]
          Length = 180

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 81/219 (36%), Positives = 108/219 (49%), Gaps = 33/219 (15%)
 Frame = -3

Query: 1018 MGTEVLRPQDILNERFRLPSVSRKSFRK----------QALEKESKKPVAAPVKN----- 884
            MGTE+LRPQ+ L ER R P  S  S+R+           A  + ++KPVA P +      
Sbjct: 1    MGTEILRPQNCLIERIRAPPASF-SWRRTTYGNCGAYLNAPFRANRKPVARPEQRKRVVE 59

Query: 883  ---------------LVLGQVKILKRGEPLDLKKKNSLGKSENVLRKSFSEEIFSVXXXX 749
                           LV+ +V IL+RGE LD + K+   K E        +E+       
Sbjct: 60   RRPSSDDSKVARGSGLVMEKVTILRRGESLDSQIKSEALKREG-------DEL------- 105

Query: 748  XXXXNLRKTFSGEIVVG-RRIGPDPELVP--IRLSDLKKSFPNRCSDNNDDVYAGSVCYT 578
                         +VVG +R+GPDPE+VP  IR+ D +  F         D+YAGS    
Sbjct: 106  -------------VVVGTQRLGPDPEMVPKQIRIMDGQIGF---------DMYAGSAFAM 143

Query: 577  SPSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 461
            SPSPR LPLP+F  +    V  AVDDSAT+DLRRLLR++
Sbjct: 144  SPSPRALPLPSFWKKVAPAV--AVDDSATRDLRRLLRLE 180


>ref|XP_002315543.1| predicted protein [Populus trichocarpa] gi|222864583|gb|EEF01714.1|
            predicted protein [Populus trichocarpa]
          Length = 206

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 76/236 (32%), Positives = 104/236 (44%), Gaps = 50/236 (21%)
 Frame = -3

Query: 1018 MGTEVLRPQDILNERFRLPSVSRKSF---------------------------------- 941
            MGTEV RPQD L ER R+    R+++                                  
Sbjct: 1    MGTEVARPQDCLIERIRVSPCRRRNYYYGNGNVSNPNAYSTNSYCNNSNPRFNRKPTAVR 60

Query: 940  -------RKQALEKESKKP-----VAAPVKNLVLGQVKILKRGEPLDLKKKNSLGKSENV 797
                   +KQ     SKK      +  P  N V+ +V IL+RGE LD K K+S   S   
Sbjct: 61   FERSGQRKKQPEPSISKKSGTVDDLKIPRNNKVMEKVTILRRGESLDTKIKSSDTAS--- 117

Query: 796  LRKSFSEEIFSVXXXXXXXXNLRKTFSGEIVVGR--RIGPDPELVP--IRLSDLKKSFPN 629
            L+K                        G+ VV    R+GPDP++V   IR+ DL+     
Sbjct: 118  LKKEQGN-------------------GGDFVVASTDRLGPDPKVVSKQIRIVDLRSPVNG 158

Query: 628  RCSDNNDDVYAGSVCYTSPSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 461
            +C     D+YAGS    SP+P  LPLP+F  +K+     ++DDSAT+DLRRLLR++
Sbjct: 159  KC-----DMYAGSAFAVSPAPSSLPLPSFSKKKQ----VSIDDSATRDLRRLLRLE 205


>ref|XP_002311816.1| predicted protein [Populus trichocarpa] gi|222851636|gb|EEE89183.1|
            predicted protein [Populus trichocarpa]
          Length = 215

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 77/241 (31%), Positives = 102/241 (42%), Gaps = 55/241 (22%)
 Frame = -3

Query: 1018 MGTEVLRPQDILNERFRLPSVSRKSF---------------------------------- 941
            MGTEVLRPQD L ER R+    R+++                                  
Sbjct: 1    MGTEVLRPQDCLTERTRVSPCRRRNYYYGNGNGNFANPNVYSSNNNRNNPRFNRKPTAVR 60

Query: 940  --RKQALEKESKKPVAAPVK---------------NLVLGQVKILKRGEPLDLKKKNSLG 812
              R    +K+S+  V+   +               N V+ +V IL+RGE LD K K+S  
Sbjct: 61   SDRSDQRKKQSEPSVSKKSRSVDDFVKIYKNNSSNNKVMEKVTILRRGESLDSKIKSSET 120

Query: 811  KSENVLRKSFSEEIFSVXXXXXXXXNLRKTFSGEIVVGR--RIGPDPELVP--IRLSDLK 644
             S  V  K                    +   G++VV    R+GPDP+ V   IR+ DL+
Sbjct: 121  ASATVSSKK------------------EQGNGGDLVVTSTDRLGPDPKTVSKQIRIVDLR 162

Query: 643  KSFPNRCSDNNDDVYAGSVCYTSPSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRI 464
                  C     D+YAGS    SP P  LPLP F  +K      +VDDSAT+DLRRLLR+
Sbjct: 163  SPVAGNC-----DMYAGSAFSVSPPPSSLPLPLFSKKKH----LSVDDSATRDLRRLLRL 213

Query: 463  D 461
            D
Sbjct: 214  D 214


>ref|XP_004144965.1| PREDICTED: uncharacterized protein LOC101217755 [Cucumis sativus]
            gi|449516675|ref|XP_004165372.1| PREDICTED:
            uncharacterized protein LOC101232319 [Cucumis sativus]
          Length = 200

 Score = 84.0 bits (206), Expect = 7e-14
 Identities = 78/233 (33%), Positives = 101/233 (43%), Gaps = 47/233 (20%)
 Frame = -3

Query: 1018 MGTEVLRPQDILNERFRLPSVS------------------------RKSF---------- 941
            MGTE+LRPQD L ER R+P  +                        RKS           
Sbjct: 1    MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 940  -RKQALEKESKKPVA---------APVKNLVLGQVKILKRGEPLDLKKKNSLGKSENVLR 791
             RK+ +   S+  V+         A   +LV+ +V IL+RGE LD K K+          
Sbjct: 61   QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEA-------- 112

Query: 790  KSFSEEIFSVXXXXXXXXNLRKTFSGEIVVGR-RIGPDPELVP--IRLSDLKKSFPNRCS 620
                               L+K     +V G  R+GP PE V   IR+ D++     +  
Sbjct: 113  -------------------LKKEGDNIVVCGTDRLGPAPETVAKQIRIVDVRSPIAGKA- 152

Query: 619  DNNDDVYAGSVCYTSPSPRKLPLPTFKVRKEGLVLPAVDDSATKDLRRLLRID 461
                DVYAGS    SPSP  LPLP+F  +K   V   VDDSAT+DLRRLLR+D
Sbjct: 153  ----DVYAGSAFSMSPSPSSLPLPSFSKKKH--VSAIVDDSATRDLRRLLRLD 199


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