BLASTX nr result

ID: Coptis24_contig00000782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000782
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18
ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251...    93   4e-17
gb|ADJ67177.1| hypothetical protein [Jatropha curcas]                  88   9e-16
ref|XP_002263900.1| PREDICTED: uncharacterized protein LOC100253...    83   4e-14
ref|XP_002527246.1| conserved hypothetical protein [Ricinus comm...    78   1e-12

>ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = -2

Query: 249 ATIFALGITLSKVFSQAIKNLSLKICTSPTSEQVLALQKLQGNLVCTMGPLFFAALRDRP 70
           ATI  L ++LS++F  +I+   L     PT +Q++A++ LQ NLV ++GP FFAAL+DRP
Sbjct: 95  ATILTLALSLSRIFVTSIQKFVLSHNLFPTPDQLVAIRALQSNLVHSVGPFFFAALKDRP 154

Query: 69  SGSLNTPLTVVAAGMSKWLDIYS 1
           +G LNTPLTVVAAG++KWLDIYS
Sbjct: 155 TGYLNTPLTVVAAGLAKWLDIYS 177


>ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251416 [Vitis vinifera]
           gi|296089606|emb|CBI39425.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
 Frame = -2

Query: 249 ATIFALGITLSKVFSQAIKNLSL---KICTSPTSEQVLALQKLQGNLVCTMGPLFFAALR 79
           + I A  + +SKVF   I+++ L   +I  +P  E++ A++ L+ ++VC +GPLFFAA R
Sbjct: 76  SAILASALAVSKVFIAKIQDIFLNLKQIDFTPNPEELAAIRDLRSSVVCAVGPLFFAAAR 135

Query: 78  DRPSGSLNTPLTVVAAGMSKWLDIYS 1
           DRPSG LNTPLTVVAAGM+KWLDIYS
Sbjct: 136 DRPSGYLNTPLTVVAAGMAKWLDIYS 161


>gb|ADJ67177.1| hypothetical protein [Jatropha curcas]
          Length = 186

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = -2

Query: 246 TIFALGITLSKVFSQAIKNLSLKICTS---PTSEQVLALQKLQGNLVCTMGPLFFAALRD 76
           TI  L  +LS+VF  +I+  ++ +  +   P    +  ++ LQG+LV ++GPLFFA+L+D
Sbjct: 97  TILTLAFSLSRVFLTSIQKFAVSVAGASFFPNLNGLATIRGLQGDLVNSVGPLFFASLKD 156

Query: 75  RPSGSLNTPLTVVAAGMSKWLDIYS 1
           RPSG LNTPLTVVAAG++KWLDIYS
Sbjct: 157 RPSGYLNTPLTVVAAGLAKWLDIYS 181


>ref|XP_002263900.1| PREDICTED: uncharacterized protein LOC100253131 [Vitis vinifera]
           gi|296083067|emb|CBI22471.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
 Frame = -2

Query: 228 ITLSKVFSQAIKNLSLKICTS------PTSEQVLALQKLQGNLVCTMGPLFFAALRDRPS 67
           ++LS   S A+  +S    T       P +E+V A++ L+   VC   PLFFAA+RDRP 
Sbjct: 42  LSLSPSTSSAVVEISRLFLTKLQQNFLPNAEEVAAIKSLRDTAVCAAAPLFFAAMRDRPR 101

Query: 66  GSLNTPLTVVAAGMSKWLDIYS 1
           G LNTPLTVVAAGM+KWLDIYS
Sbjct: 102 GYLNTPLTVVAAGMAKWLDIYS 123


>ref|XP_002527246.1| conserved hypothetical protein [Ricinus communis]
           gi|223533339|gb|EEF35090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = -2

Query: 246 TIFALGITLSKVFSQAIKNLSLKICTSPTSEQVLALQKLQGNLVCTMGPLFFAALRDRPS 67
           TI AL  +LS++F   I  L             LALQ    NL  ++GPLFFAA+RDRPS
Sbjct: 85  TILALAFSLSRLFLNQISFLPK-----------LALQNTT-NLTHSVGPLFFAAIRDRPS 132

Query: 66  GSLNTPLTVVAAGMSKWLDIYS 1
           G LNTPLTVVAAG++KWLDIYS
Sbjct: 133 GYLNTPLTVVAAGLAKWLDIYS 154


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