BLASTX nr result

ID: Coptis24_contig00000780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000780
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39503.1| unknown [Medicago truncatula]                           80   4e-19
ref|XP_003608773.1| Lipid transfer-like protein VAS [Medicago tr...    80   5e-19
emb|CAN68310.1| hypothetical protein VITISV_043508 [Vitis vinifera]    91   6e-19
gb|AFK33893.1| unknown [Lotus japonicus]                               87   1e-18
gb|ACM78616.1| protease inhibitor/seed storage/lipid transfer pr...    84   8e-18

>gb|AFK39503.1| unknown [Medicago truncatula]
          Length = 148

 Score = 79.7 bits (195), Expect(2) = 4e-19
 Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -2

Query: 506 TKPPESCCTPLRETIQNQRDCLCNLYSNPGLISAFGINITQALELPKYCGVPSDTSLC-G 330
           TKPP SCC P+++T++ +  CLCNL+  PGL++ F IN TQAL L + CGV +D + C  
Sbjct: 45  TKPPSSCCDPIKKTVETELTCLCNLFYAPGLLATFNINTTQALALSRNCGVTTDLTTCKH 104

Query: 329 KASSPVPSS 303
             S+P P+S
Sbjct: 105 NGSAPAPTS 113



 Score = 41.2 bits (95), Expect(2) = 4e-19
 Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
 Frame = -1

Query: 648 MVVETKAQ---IPDCATKLTPCANFFNSTKPP 562
           M+  T+AQ   IP CAT L PCA++ NSTKPP
Sbjct: 17  MINTTEAQSTDIPSCATNLIPCADYLNSTKPP 48


>ref|XP_003608773.1| Lipid transfer-like protein VAS [Medicago truncatula]
           gi|355509828|gb|AES90970.1| Lipid transfer-like protein
           VAS [Medicago truncatula]
          Length = 119

 Score = 79.7 bits (195), Expect(2) = 5e-19
 Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -2

Query: 506 TKPPESCCTPLRETIQNQRDCLCNLYSNPGLISAFGINITQALELPKYCGVPSDTSLC-G 330
           TKPP SCC P+++T++ +  CLCNL+  PGL++ F IN TQAL L + CGV +D + C  
Sbjct: 45  TKPPSSCCDPIKKTVETELTCLCNLFYAPGLLATFNINTTQALALSRNCGVTTDLTTCKH 104

Query: 329 KASSPVPSS 303
             S+P P+S
Sbjct: 105 NGSAPAPTS 113



 Score = 41.2 bits (95), Expect(2) = 5e-19
 Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
 Frame = -1

Query: 648 MVVETKAQ---IPDCATKLTPCANFFNSTKPP 562
           M+  T+AQ   IP CAT L PCA++ NSTKPP
Sbjct: 17  MINTTEAQSTDIPSCATNLIPCADYLNSTKPP 48


>emb|CAN68310.1| hypothetical protein VITISV_043508 [Vitis vinifera]
          Length = 145

 Score = 91.3 bits (225), Expect(2) = 6e-19
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = -2

Query: 506 TKPPESCCTPLRETIQNQRDCLCNLYSNPGLISAFGINITQALELPKYCGVPSDTSLCGK 327
           T PP +CCTPL+  ++N +DCLCNLY+NP L+ +  IN+T AL+LPK CG+  + +  G 
Sbjct: 47  TSPPANCCTPLKNAVENDKDCLCNLYNNPSLLQSLXINVTDALQLPKNCGITEELNCNGG 106

Query: 326 ASSPV--PSSVPGNRXXXXXXXXXXXXXXPRSDGNRVGMMAWTG 201
           + SP   P + PG                   DG    M+AWTG
Sbjct: 107 SPSPTGSPPATPG------------------KDGGGASMVAWTG 132



 Score = 29.3 bits (64), Expect(2) = 6e-19
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 615 CATKLTPCANFFNSTKPP 562
           CA++LT C ++ NST PP
Sbjct: 33  CASELTACXDYLNSTSPP 50


>gb|AFK33893.1| unknown [Lotus japonicus]
          Length = 153

 Score = 86.7 bits (213), Expect(2) = 1e-18
 Identities = 36/70 (51%), Positives = 50/70 (71%)
 Frame = -2

Query: 506 TKPPESCCTPLRETIQNQRDCLCNLYSNPGLISAFGINITQALELPKYCGVPSDTSLCGK 327
           T PP SCC P+++T++ Q  CLCNL+ +PGL+ +F I+  QAL+L + CGV SD S C  
Sbjct: 50  TNPPASCCDPIKKTVETQLTCLCNLFYSPGLLQSFNISTDQALQLSRRCGVTSDLSSCKS 109

Query: 326 ASSPVPSSVP 297
            S+P P+SVP
Sbjct: 110 GSAPSPASVP 119



 Score = 32.7 bits (73), Expect(2) = 1e-18
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 639 ETKAQIPDCATKLTPCANFFNSTKPP 562
           + ++ IP CA  L PCA+   ST PP
Sbjct: 28  QAQSSIPSCAQNLIPCADHLTSTNPP 53


>gb|ACM78616.1| protease inhibitor/seed storage/lipid transfer protein family
           protein [Tamarix hispida]
          Length = 147

 Score = 83.6 bits (205), Expect(2) = 8e-18
 Identities = 32/69 (46%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
 Frame = -2

Query: 506 TKPPESCCTPLRETIQNQRDCLCNLYSNPGLISAFGINITQALELPKYCGVP-SDTSLCG 330
           TKPP SCC PL++ I+ ++DCLCN+++ PGL+ +FGIN+T+A +LP+ C +P +  ++C 
Sbjct: 44  TKPPSSCCDPLKKAIETEKDCLCNIFNTPGLLKSFGINVTEATQLPRKCEIPGTSINMCT 103

Query: 329 KASSPVPSS 303
            A S  P++
Sbjct: 104 SAPSSSPAA 112



 Score = 33.1 bits (74), Expect(2) = 8e-18
 Identities = 14/20 (70%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -1

Query: 618 DCATKLTPCANFFN-STKPP 562
           DCA+ LTPCA F N +TKPP
Sbjct: 28  DCASSLTPCATFLNATTKPP 47


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