BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000770
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605285.1| Protein transport protein Sec61 beta subunit...    96   4e-18
ref|XP_002326819.1| predicted protein [Populus trichocarpa] gi|1...    94   2e-17
gb|AFK48843.1| unknown [Lotus japonicus]                               94   3e-17
ref|XP_003629768.1| Protein transport protein Sec61 beta subunit...    93   5e-17
emb|CBI16595.3| unnamed protein product [Vitis vinifera]               92   6e-17

>ref|XP_003605285.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
           gi|355506340|gb|AES87482.1| Protein transport protein
           Sec61 beta subunit [Medicago truncatula]
           gi|388516919|gb|AFK46521.1| unknown [Medicago
           truncatula] gi|388518729|gb|AFK47426.1| unknown
           [Medicago truncatula]
          Length = 80

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/57 (84%), Positives = 48/57 (84%)
 Frame = +2

Query: 179 TTSGGASAAVGNNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVFGKLYLREA 349
           T  GGAS      MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHV GKLYLREA
Sbjct: 24  TAGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVVGKLYLREA 80


>ref|XP_002326819.1| predicted protein [Populus trichocarpa] gi|118486407|gb|ABK95043.1|
           unknown [Populus trichocarpa]
           gi|222835134|gb|EEE73569.1| predicted protein [Populus
           trichocarpa]
          Length = 82

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/54 (85%), Positives = 47/54 (87%)
 Frame = +2

Query: 179 TTSGGASAAVGNNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVFGKLYL 340
           TTSGGAS      MLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHV GKLYL
Sbjct: 24  TTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLYL 77


>gb|AFK48843.1| unknown [Lotus japonicus]
          Length = 82

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 49/59 (83%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
 Frame = +2

Query: 179 TTSGGASAAVGNNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVFGKLYL--REA 349
           TTSGGAS      MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHV GKLY   REA
Sbjct: 24  TTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 82


>ref|XP_003629768.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
           gi|355523790|gb|AET04244.1| Protein transport protein
           Sec61 beta subunit [Medicago truncatula]
          Length = 81

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 45/56 (80%), Positives = 47/56 (83%)
 Frame = +2

Query: 179 TTSGGASAAVGNNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVFGKLYLRE 346
           T  GGAS      MLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHV GKLYLR+
Sbjct: 24  TPGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVIGKLYLRK 79


>emb|CBI16595.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 44/53 (83%), Positives = 46/53 (86%)
 Frame = +2

Query: 179 TTSGGASAAVGNNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVFGKLY 337
           TTSGG +     NMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHV GKLY
Sbjct: 54  TTSGGTAGVASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLY 106