BLASTX nr result
ID: Coptis24_contig00000746
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000746
(3214 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281291.2| PREDICTED: two-component response regulator ... 473 e-130
ref|XP_002533196.1| two-component sensor histidine kinase bacter... 449 e-123
ref|XP_002315852.1| type-b response regulator [Populus trichocar... 426 e-116
emb|CBM42561.1| putative B-type response regulator 16 [Populus x... 419 e-114
emb|CBM42560.1| putative B-type response regulator 15 [Populus x... 405 e-110
>ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 473 bits (1216), Expect = e-130
Identities = 277/551 (50%), Positives = 340/551 (61%), Gaps = 39/551 (7%)
Frame = +1
Query: 1117 GFKLLEHVGLEMNLPVIS-------------------EYHFLLLRCQLL----------- 1206
G+KLLEHVGLEM+LPVI +Y +R + L
Sbjct: 93 GYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKK 152
Query: 1207 -HFRDEFKLSFCMEETDRHKRAGDDVEYASSANEGTDGNWKIQKKRKDAKXXXXXXXXXX 1383
+ E + S +E+ DRHKR G+D EYASS NEG +G K QKKR+D+K
Sbjct: 153 WNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRDSKDEDDGELENE 212
Query: 1384 XXXSTSKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVPGLSRENVASHLQKFR 1563
STSKKPRVVWSVELHQQFV+AVNQLGIDKAVPKRILELMNVPGL+RENVASHLQKFR
Sbjct: 213 DP-STSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFR 271
Query: 1564 QYLKRLSGVAQQQSGIYNNYYGTGESIGRHGSVSGIDIQALAASGQIPPETLAALHAEVF 1743
YLKRLSGVAQQQ GI N++ G E + GS+ DIQALAASGQIPP+TLAAL AE+
Sbjct: 272 LYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSLGRFDIQALAASGQIPPQTLAALQAELL 331
Query: 1744 GRPTGTLVLPVMDKAVLIHAASQGGKSIPGECGVAFGQPIAKCPPHISKQFPQSSVSDED 1923
GRPT LVLP MD+ L+ A+ QG K IP E GVAFGQP+ KC +ISK FP + VS ED
Sbjct: 332 GRPTSNLVLPAMDQPALLQASLQGPKCIPVEHGVAFGQPLVKCQTNISKHFPPTVVSTED 391
Query: 1924 IPSGISTWRPNNLTTVGSTGNHEGLSA------XXXXXXXXXXXXXXXXXSVLPELSHTI 2085
+PSG W N+L TVG++G+ GLSA +V+PE S +I
Sbjct: 392 VPSGFGAWPSNSLGTVGTSGSLGGLSAQNNNILMDMLHQQQQHQQQQQQQAVIPEPSRSI 451
Query: 2086 NVRPSCLVVPSQSPTSFQAGNISAPFNQXXXXXXXXXNDYSFLSAQSHNVSVGLGQVPCV 2265
NV+PSCLVVPS++ SFQAGN A NQ DYS L+ QS+N S+ +GQ+
Sbjct: 452 NVQPSCLVVPSRTSASFQAGNSPASVNQNCSFNRNAVIDYSLLTPQSNNSSLSVGQISDG 511
Query: 2266 DTKGDGVLDGYXXXXXXXXXXXXXXGRADNVTRWQAQNFAINSSAARQVPG--PNMYSVQ 2439
D K VL G+ A N T QN + A RQ+PG N+ +Q
Sbjct: 512 DLKNTTVLGGFSAPGSISPSVSSCSVNAGNSTTRPVQNSTVTFGAPRQLPGVVSNICDIQ 571
Query: 2440 GSYTSKKINLPDQELGRDLGFVGRGYSVPSRFAVEDLESSIGHVTHAKTYGDNDGGGVKQ 2619
GSY ++ + DQ L R+LGFVG+G S+PSRFAV++ ES I ++ + K YG+N+G VKQ
Sbjct: 572 GSYGARSGEVLDQGLLRNLGFVGKGTSIPSRFAVDEPESPISNLNNGKVYGENEGNRVKQ 631
Query: 2620 ELNLDFFENAK 2652
E NLD+ ENA+
Sbjct: 632 EPNLDYMENAR 642
>ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis] gi|223526994|gb|EEF29188.1| two-component
sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 449 bits (1155), Expect = e-123
Identities = 270/571 (47%), Positives = 344/571 (60%), Gaps = 39/571 (6%)
Frame = +1
Query: 1117 GFKLLEHVGLEMNLPVIS-------------------EYHFLLLRCQLL----------- 1206
GFKLLEHVGLEM+LPVI +Y +R + L
Sbjct: 103 GFKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKK 162
Query: 1207 -HFRDEFKLSFCMEETDRHKRAGDDVEYASSANEGTDGNWKIQKKRKDAKXXXXXXXXXX 1383
H E + S +E+ DRHKR +D EY SS NEGT+G K QK+R ++K
Sbjct: 163 WHENKEIEHSGSLEDNDRHKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSKDEDDGEPDSD 222
Query: 1384 XXXSTSKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVPGLSRENVASHLQKFR 1563
STSKKPRVVWSVELHQQFV+AVNQLGIDKAVPKRILELMNVPGL+RENVASHLQKFR
Sbjct: 223 DP-STSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFR 281
Query: 1564 QYLKRLSGVAQQQSGIYNNYYGTGESIGRHGSVSGIDIQALAASGQIPPETLAALHAEVF 1743
YLKRLSGVA QQ GI + + G +S + S+ DIQALAASGQIPP+TLAALHAE+F
Sbjct: 282 LYLKRLSGVA-QQGGISSTFCGPMDSNVKLNSLGRFDIQALAASGQIPPQTLAALHAELF 340
Query: 1744 GRPTGTLVLPVMDKAVLIHAASQGGKSIPGECGVAFGQPIAKCPPHISKQFPQSSVSDED 1923
GRPTG+LV MD+ L+ A+ Q K IP E GV FGQPI KC ISK FPQ+ VS E+
Sbjct: 341 GRPTGSLV-TTMDQPTLLQASRQSPKCIPVEHGVTFGQPIVKCSSGISKHFPQNMVSVEE 399
Query: 1924 IPSGISTWRPNNLTTVGSTGNHEGLSA-----XXXXXXXXXXXXXXXXXSVLPELSHTIN 2088
+ SG W N+L TVG + N G++ L + S +IN
Sbjct: 400 VSSGYGAWPSNSLGTVGPSTNLGGMTTQNGNMLMDIFHQQQKQQQPQQQQSLADPSRSIN 459
Query: 2089 VRPSCLVVPSQSPTSFQAGNISAPFNQXXXXXXXXXNDYSFLSAQSHNVSVGLGQVPCVD 2268
V+PSCLVVPSQS FQAGN A NQ DYS LS+QS+N ++ +G +P D
Sbjct: 460 VQPSCLVVPSQSSACFQAGNSPASVNQSNFNRNVVI-DYSLLSSQSNNSALNIGHIPEGD 518
Query: 2269 TKGDGVLDGYXXXXXXXXXXXXXXGRADNVTRWQAQNFAINSSAARQVP--GPNMYSVQG 2442
K G ++GY AD+ Q QN + A RQ+P PN++++QG
Sbjct: 519 LKTTGAVNGYSAPGSLSPPASSCSVNADSGVPRQVQNPTLAFGAVRQLPALSPNIFNIQG 578
Query: 2443 SYTSKKINLPDQ-ELGRDLGFVGRGYSVPSRFAVEDLESSIGHVTHAKTYGDNDGGGVKQ 2619
SY + ++ DQ ++LGFVG+G +PSRFAV++ E+ +++H K Y +N+ VKQ
Sbjct: 579 SYGVRSDDILDQGPFFKNLGFVGKGTCIPSRFAVDEFETPSSNLSHGKLYVENNDNKVKQ 638
Query: 2620 ELNLDFFENAKTGMPVIGQYSPSDLMSVLSK 2712
E N+DF + ++ G+PV+ QY P+DLMSV ++
Sbjct: 639 EPNIDFTDTSRVGIPVLQQYPPNDLMSVFTE 669
>ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator
[Populus trichocarpa]
Length = 663
Score = 426 bits (1096), Expect = e-116
Identities = 270/572 (47%), Positives = 343/572 (59%), Gaps = 40/572 (6%)
Frame = +1
Query: 1117 GFKLLEHVGLEMNLPVIS-------------------EYHFLLLRCQLL----------- 1206
GFKLLE VGLEM+LPVI +Y +R + L
Sbjct: 98 GFKLLELVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVIRKK 157
Query: 1207 -HFRDEFKLSFCMEETDRHKRAGDDVEYASSANEGTDGNWKIQKKRKDAKXXXXXXXXXX 1383
+ E + S E+ D +KR DD E ASS NEG +G K QKKR AK
Sbjct: 158 WNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEID 217
Query: 1384 XXXSTSKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVPGLSRENVASHLQKFR 1563
S SKKPRVVWSVELHQQFV+AVNQLGIDKAVPKRILELMNVPGL+RENVASHLQKFR
Sbjct: 218 DP-SASKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFR 276
Query: 1564 QYLKRLSGVAQQQSGIYNNYYGTGESIGRHGSVSGIDIQALAASGQIPPETLAALHAEVF 1743
YLKRLSGVA QQ GI N + G +S + + DIQALAAS QIPP+TLAALHAE+F
Sbjct: 277 LYLKRLSGVA-QQGGISNTFCGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELF 335
Query: 1744 GRPTGTLVLPVMDKAVLIHAASQGGKSIPGECGVAFGQPIAKCPPHISKQFPQSSVSDED 1923
GRPTG+LV V D+ L+ A+ QG K IP E GVAFGQP+ KC +ISK FP++ +S ED
Sbjct: 336 GRPTGSLVTTV-DQPALLQASMQGPKCIPVEHGVAFGQPLVKCQTNISKHFPRNVISVED 394
Query: 1924 IPSGISTWRPNNLTTVGSTGNHEGLSA-----XXXXXXXXXXXXXXXXXSVLPELSHTIN 2088
+ SG W N++ TVGS+ N G+++ S L E S +IN
Sbjct: 395 VASGFGAWPSNSVGTVGSSSNLGGMNSQNSNMLMDILQQQKQQQQPLQQSSLSEPSRSIN 454
Query: 2089 VRPSCLVVPSQSPTSFQAGNISAPFNQXXXXXXXXXNDYSFLSAQSHNVSVGLGQVPCVD 2268
V+PSCLVVPSQSP +FQAGN A +Q DYS LSAQS+N S+ +GQ+ D
Sbjct: 455 VQPSCLVVPSQSPATFQAGNSPASVDQNCSYNRSTMIDYSLLSAQSNNSSLNIGQILNGD 514
Query: 2269 TKGDGVLDGYXXXXXXXXXXXXXXGRADNVTRWQAQNFAINSSAARQVPG--PNMYSVQG 2442
K GV GY DN T Q ++ + A RQ+PG PN+ ++QG
Sbjct: 515 LKTTGV-SGYSGSVSISPLSPCSVD-PDN-TSQQGRSSTMAIRAVRQLPGLVPNISNLQG 571
Query: 2443 SYTSKKINLPDQELGRDLGFVGRGYSVPSRFAVEDLESSIGHVTHAKTYGDNDGGGVKQE 2622
SY+++ + DQ R+LGFV + S+PSR AV++ ES++ + H K+Y + G VKQE
Sbjct: 572 SYSARSSEVLDQRPLRNLGFVAKCTSIPSRLAVDEFESTMSSLDHEKSYMEISGNKVKQE 631
Query: 2623 LNLDFFENAKTGMPVIGQY--SPSDLMSVLSK 2712
N+++ +NA+ G+P++ Q +PSDLMSV ++
Sbjct: 632 PNIEYMDNARVGIPILQQLPPAPSDLMSVFTE 663
>emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 419 bits (1076), Expect = e-114
Identities = 268/572 (46%), Positives = 339/572 (59%), Gaps = 40/572 (6%)
Frame = +1
Query: 1117 GFKLLEHVGLEMNLPVIS-------------------EYHFLLLRCQLL----------- 1206
GFKLLE VGLEM+LPVI +Y +R + L
Sbjct: 98 GFKLLELVGLEMDLPVIMMSADGRTSAVMRGIKHGACDYLIKPIREEELKNIWQHVIRKK 157
Query: 1207 -HFRDEFKLSFCMEETDRHKRAGDDVEYASSANEGTDGNWKIQKKRKDAKXXXXXXXXXX 1383
+ E + S E+ D +KR DD E ASS NEG +G K QKKR AK
Sbjct: 158 WNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEID 217
Query: 1384 XXXSTSKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVPGLSRENVASHLQKFR 1563
S SKKPRVVWSVELHQQFV+AVNQLGID+AVPKRILELMNVPGL+RENVASHLQKFR
Sbjct: 218 DP-SASKKPRVVWSVELHQQFVSAVNQLGIDEAVPKRILELMNVPGLTRENVASHLQKFR 276
Query: 1564 QYLKRLSGVAQQQSGIYNNYYGTGESIGRHGSVSGIDIQALAASGQIPPETLAALHAEVF 1743
YLKRLSGVA QQ GI N + G +S + + DIQALAAS QIPP+TLAALHAE+F
Sbjct: 277 LYLKRLSGVA-QQGGISNTFCGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELF 335
Query: 1744 GRPTGTLVLPVMDKAVLIHAASQGGKSIPGECGVAFGQPIAKCPPHISKQFPQSSVSDED 1923
GRPTG+LV V D+ L+ A+ QG K IP E GVAFGQP+AKC +ISK FP++ +S ED
Sbjct: 336 GRPTGSLVTTV-DQPALLQASMQGPKCIPVEHGVAFGQPLAKCQSNISKHFPRNVISVED 394
Query: 1924 IPSGISTWRPNNLTTVGSTGNHEGLSA-----XXXXXXXXXXXXXXXXXSVLPELSHTIN 2088
+ SG W N++ TVGS+ N G+++ S L E S +IN
Sbjct: 395 VASGFGAWPSNSVGTVGSSSNLGGMNSQNSTMLMDILQQQKQQQQPLQQSSLSEPSCSIN 454
Query: 2089 VRPSCLVVPSQSPTSFQAGNISAPFNQXXXXXXXXXNDYSFLSAQSHNVSVGLGQVPCVD 2268
V+PSCLVVPSQSP +FQAGN A +Q DYS LSAQS+N + +GQ+ D
Sbjct: 455 VQPSCLVVPSQSPATFQAGNSPASVDQSCSYNRSTMIDYSLLSAQSNNSLLNIGQILNGD 514
Query: 2269 TKGDGVLDGYXXXXXXXXXXXXXXGRADNVTRWQAQNFAINSSAARQVPG--PNMYSVQG 2442
K GV DN T Q ++ + A RQ+PG PN+ + QG
Sbjct: 515 LKTTGV--SRYSGSVSISPLSPCSVDPDN-TSQQGRSSTMAIRAVRQLPGLVPNISNFQG 571
Query: 2443 SYTSKKINLPDQELGRDLGFVGRGYSVPSRFAVEDLESSIGHVTHAKTYGDNDGGGVKQE 2622
SY+++ + DQ R+LGFV S+PSR AV++ ES++ + H K+Y + G VKQE
Sbjct: 572 SYSARSSEVLDQRPLRNLGFVANCTSIPSRLAVDEFESTMSSLDHEKSYMEISGNKVKQE 631
Query: 2623 LNLDFFENAKTGMPVIGQY--SPSDLMSVLSK 2712
N++F +NA+ G+P++ Q +PSDLMSV ++
Sbjct: 632 PNIEFMDNARVGIPMLQQLPPAPSDLMSVFTE 663
>emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 405 bits (1040), Expect = e-110
Identities = 267/581 (45%), Positives = 333/581 (57%), Gaps = 49/581 (8%)
Frame = +1
Query: 1117 GFKLLEHVGLEMNLPVIS-------------------EYHFLLLRCQLL----------- 1206
GFKLLE VGLEM+LPVI +Y +R + L
Sbjct: 98 GFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQHVIRKK 157
Query: 1207 -HFRDEFKLSFCMEETDRHKRAGDDVEYASSANEGTDGNWKIQKKRKDAKXXXXXXXXXX 1383
+ E + S E+ DRHKR G+D E ASS +EG +G K QKKR AK
Sbjct: 158 WNENKEQEHSGSFEDNDRHKR-GNDAENASSVSEGAEGVLKGQKKRSIAKDEDDAELEND 216
Query: 1384 XXXSTSKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVPGLSRENVASHLQKFR 1563
S S+KPRVVWSVELHQQFV+AVN LGIDKAVPKRILELMNVPGL+RENVASHLQKFR
Sbjct: 217 DP-SASRKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENVASHLQKFR 275
Query: 1564 QYLKRLSGVAQQQSGIYNNYYGTGESIGRHGSVSGIDIQALAASGQIPPETLAALHAEVF 1743
YLKRLSGVA QQ GI N + G +S + + DIQ LAASGQIPP+TLAA HAE+F
Sbjct: 276 LYLKRLSGVA-QQGGISNPFCGLLDSNVKLNPLGRFDIQVLAASGQIPPQTLAAPHAELF 334
Query: 1744 GRPTGTLVLPVMDKAVLIHAASQGGKSIPGECGVAFGQPIAKCPPHISKQFPQSSVSDED 1923
G P G +V V D+ L+ A+ QG K IP E G+AFGQP+ KC ++SK FPQ+ VS E+
Sbjct: 335 GHPAGGMVTTV-DQPALLQASVQGPKCIPAEHGMAFGQPLGKCQTNMSKHFPQNVVSAEE 393
Query: 1924 IPSGISTWRPNNLTTVGSTGNHEGLSAXXXXXXXXXXXXXXXXXS-----VLPELSHTIN 2088
+ +G W N++ TVG N G+S+ LPE S IN
Sbjct: 394 VATGFVAWPSNSVGTVGPISNLGGMSSKNSNMLMDVVQQQKQQQQSPHLPSLPEPSRIIN 453
Query: 2089 VRPSCLVVPSQSPTSFQAGNISAPFNQXXXXXXXXXNDYSFLSAQSHNVSVGLGQVPCVD 2268
V+PSCLVVPSQS +FQAGN A NQ DYS LS QS+N S+ +GQ+ D
Sbjct: 454 VQPSCLVVPSQSSATFQAGNSPASVNQNCSYSRSPMIDYSLLSPQSNNSSLNIGQISHGD 513
Query: 2269 TKGDGVLDGYXXXXXXXXXXXXXXGRADNVTRWQAQNFAINSSAARQVP--GPNMYSVQG 2442
K GV GY DN T Q Q+ + AARQ+P GPN+ + QG
Sbjct: 514 LKTTGV-SGYSGSGSISPLSSCSV-NPDN-TSQQGQSSTMTIRAARQLPGLGPNISNFQG 570
Query: 2443 SYTSKKINLPDQELGRDLGFVGRGYSVPSRFAVEDLESSIGHVTHAKTYGDN-------- 2598
SY +K + DQ R+LGFVG+ S+PSR AV++ ES++ ++ H K Y +
Sbjct: 571 SYGAKSSEVLDQGPLRNLGFVGKCTSIPSRLAVDEFESTMSNLEHEKLYMETNGNKVKQE 630
Query: 2599 -DGGGVKQELNLDFFENAKTGMPVIGQYSP--SDLMSVLSK 2712
+G VKQE N++F +NAK +P++ Q P SDLMSV +
Sbjct: 631 PNGNAVKQEPNVEFMDNAKVLIPILPQLPPNTSDLMSVFKE 671