BLASTX nr result
ID: Coptis24_contig00000736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000736
(1759 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 384 e-104
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 374 e-101
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 373 e-100
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 373 e-100
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 361 4e-97
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 384 bits (987), Expect = e-104
Identities = 215/569 (37%), Positives = 304/569 (53%), Gaps = 6/569 (1%)
Frame = -3
Query: 1691 VYGEPVSCRRKKVWDEIRDFAPYIHGPWLLFGDFNAISSLNEKSGGHRVLSQSMHDFNDF 1512
+YG+ S + + W +R PWL+ GDFN I +EK GG +M +F
Sbjct: 351 LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRHA 410
Query: 1511 ISDLGLIDLGFRGSKFTWSNN-RSFDNHILERLDRALASVSWFESFPHASVKTITNVSSD 1335
++D GL DLGF G FTW N+ S + +I ERLDRA+A+ W FP A V SD
Sbjct: 411 LTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVINGDPRHSD 470
Query: 1334 HLALSIRLSNVEPSHR-----KPFRFCEMWLRDETCKEVIQNAWGSVDSVDYCRDSVIKK 1170
H + I L R FRF WL +E KEV++ AW + V
Sbjct: 471 HRPVIIELEGKNKGVRGRNGHNDFRFEAAWLEEEKFKEVVKEAWDVSAGLQGL--PVHAS 528
Query: 1169 LGVTRKRLQNWNKNIFGNVLSEIRRVKKELETMMLGEMNEWKYKXXXXXXXXXXXXXXXE 990
L L +W+ N+ G++ +++VKKELET ++ +
Sbjct: 529 LAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRLEKLEQQV 588
Query: 989 ASLWRQKSGNNWIKDYARNTKYFHLSTVYRRRKNNITKLKDDGGVWREGREKVGEIINDF 810
W+Q++ NW+ RNT +FH S RRR+N I KL+ + G W E E +I +F
Sbjct: 589 DIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEF 648
Query: 809 FSHLFTTSNPEPNNDILHLFEPIITDRENSMLTVIPTDEEIWDVVKKMGALKAPGPDGFQ 630
F LFT++ + + +L + + ++ N L T EE+ + + +G LKAPGPDG
Sbjct: 649 FKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMP 708
Query: 629 *VFYQNCWDIVGETVVETVKNFFLLGILEPNLNETFISLIPKIPNPDHIAKFRPISLCNF 450
FY+ CWD+VGE V + V G + N+ I LIPK+ P+ I RPISLCN
Sbjct: 709 AGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNV 768
Query: 449 IYKIISKLLANRLKSHLHKIVSPFQGAFVKGRCIGDNIGLTSEIFYNXXXXXXXXKGWMA 270
YK++SK+LANRLK L ++SP Q AFV GR I DNI + E+ + G+ A
Sbjct: 769 CYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAA 828
Query: 269 VKLDMKKAFDQVEWDFLYKIMSKLGFGNKWIELIKQCLETVSFRVLLNGVPLDNFTSRRG 90
KLDM KA+D+VEW FL+ ++ KLGF W+ LI +C+ TV++R+ +NG ++F+ RG
Sbjct: 829 FKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRG 888
Query: 89 LRQGDPLSPYLFILVTEALSRMLHKGERD 3
LRQGDPLSPYLF+L E S +L K E +
Sbjct: 889 LRQGDPLSPYLFLLCAEGFSALLSKTEEE 917
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 374 bits (961), Expect = e-101
Identities = 210/566 (37%), Positives = 309/566 (54%), Gaps = 2/566 (0%)
Frame = -3
Query: 1706 WFFTLVYGEPVSCRRKKVWDEIRDFAPYIHGPWLLFGDFNAISSLNEKSGGHRVLSQSMH 1527
W T VYGEP + R ++W+ +R PWL+ GDFN E + + M
Sbjct: 346 WTATFVYGEPKAQNRHEMWNLLRRIRLNASDPWLMIGDFNEAMWQIEHRSRVKHSERQMR 405
Query: 1526 DFNDFISDLGLIDLGFRGSKFTWSNNRSFDNHILERLDRALASVSWFESFPHASVKTITN 1347
DF + + + L D+GF+G +T+ NN++ N++ RLDRA+AS W F A++ +T
Sbjct: 406 DFREVLVECDLQDIGFQGVPWTYDNNQASPNNVKVRLDRAVASPVWRAMFDQANIMHLTT 465
Query: 1346 VSSDHLALSIRLS-NVEPSHRKPFRFCE-MWLRDETCKEVIQNAWGSVDSVDYCRDSVIK 1173
SDH+ L + N++ R E +W R ++ + +W D V
Sbjct: 466 ACSDHVPLLLEKGGNMQQRRRSKINCFEAVWERVKSFNSIEHESWDDGGLAKNLGD-VRT 524
Query: 1172 KLGVTRKRLQNWNKNIFGNVLSEIRRVKKELETMMLGEMNEWKYKXXXXXXXXXXXXXXX 993
KL T + L+ W+++ GN+ I R ++ELE M + E
Sbjct: 525 KLAYTMENLKRWSRDKIGNIKKSIERCRRELEEMRM-RGREDSEPDVHRLKIFLQELLHR 583
Query: 992 EASLWRQKSGNNWIKDYARNTKYFHLSTVYRRRKNNITKLKDDGGVWREGREKVGEIIND 813
E W+Q+S W+K+ RNT+YFHL +R RKN I KL+ G+ E++GEI
Sbjct: 584 EEIWWKQRSRITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARS 643
Query: 812 FFSHLFTTSNPEPNNDILHLFEPIITDRENSMLTVIPTDEEIWDVVKKMGALKAPGPDGF 633
FF L+T ++L++FEP ITD N MLT TDEEI D + ++G LKAPGPDGF
Sbjct: 644 FFRDLYTKDESLNPGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGF 703
Query: 632 Q*VFYQNCWDIVGETVVETVKNFFLLGILEPNLNETFISLIPKIPNPDHIAKFRPISLCN 453
F+Q W ++ V+E V+ FF G + +N+T I +IPK P + FRP+SLCN
Sbjct: 704 PARFFQRNWGVLKRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMKDFRPVSLCN 763
Query: 452 FIYKIISKLLANRLKSHLHKIVSPFQGAFVKGRCIGDNIGLTSEIFYNXXXXXXXXKGWM 273
IYK+++K L NRL+ L +I+S Q AFV GR I DN + E F++ + +
Sbjct: 764 VIYKVVAKCLVNRLRPLLQEIISETQSAFVPGRMITDNALVAFECFHSIHKCTRESQDFC 823
Query: 272 AVKLDMKKAFDQVEWDFLYKIMSKLGFGNKWIELIKQCLETVSFRVLLNGVPLDNFTSRR 93
A+KLD+ KA+D+V+W FL + KLGFGN W + I C+ +V + V LNG L+ F R
Sbjct: 824 ALKLDLSKAYDRVDWGFLDGALQKLGFGNIWRKWIMSCVTSVRYSVRLNGNMLEPFYPTR 883
Query: 92 GLRQGDPLSPYLFILVTEALSRMLHK 15
GLR+GDPL+PYLF+ + + LS +L +
Sbjct: 884 GLREGDPLNPYLFLFIADGLSNILQR 909
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 373 bits (957), Expect = e-100
Identities = 216/586 (36%), Positives = 311/586 (53%), Gaps = 7/586 (1%)
Frame = -3
Query: 1757 TQNHISGKITNFGYHGD--WFFTLVYGEPVSCRRKKVWDEIRDFAPYIHGPWLLFGDFNA 1584
+QNHI G + G +GD W F +YG P + K W I+ GP + GDFN
Sbjct: 85 SQNHICGDV---GSNGDVRWRFVGIYGWPEEENKHKTWALIKGLCDEYEGPIVFGGDFNE 141
Query: 1583 ISSLNEKSGGHRVLSQSMHDFNDFISDLGLIDLGFRGSKFTWSNNRSFDNHILERLDRAL 1404
I S +EK GG +++ F + + D L DL F G TW RS ++ I ERLDR +
Sbjct: 142 ILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTWERGRSPESRIRERLDRFI 201
Query: 1403 ASVSWFESFPHASVKTITNVSSDHLALSIRLSNVEPSHRKP---FRFCEMWLRDETCKEV 1233
S SW FP A + SDH A+ +R E R+ F F WL D+TC+EV
Sbjct: 202 VSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGGFWFETFWLLDDTCEEV 261
Query: 1232 IQNAWGSVDSVDYCRDSVIKKLGVTRKRLQNWNKNIFGNVLSEIRRVKKELETMMLGEMN 1053
++ AW + + C +KLG + LQ W+K FG++ +I V+K+L +
Sbjct: 262 VRGAWNAAEGGRIC-----EKLGAVARELQGWSKKTFGSLRKKIEAVEKKLHAAQGEATS 316
Query: 1052 EWKYKXXXXXXXXXXXXXXXEASLWRQKSGNNWIKDYARNTKYFHLSTVYRRRKNNITKL 873
++ + W +S +KD RNT YFH R+++N I +
Sbjct: 317 IDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYFHHKASQRKKRNLIHGI 376
Query: 872 KDDGGVWREGREKVGEIINDFFSHLFTTSNPEPNN--DILHLFEPIITDRENSMLTVIPT 699
D GG W+ E++ ++ +F +FT+S P N+ ++L + +T N +L +
Sbjct: 377 FDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEYNDILLKPYS 436
Query: 698 DEEIWDVVKKMGALKAPGPDGFQ*VFYQNCWDIVGETVVETVKNFFLLGILEPNLNETFI 519
EEI+ + M KAPGPDG +FYQ W I+G+ V V + N+N T I
Sbjct: 437 KEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSCPGNVNCTNI 496
Query: 518 SLIPKIPNPDHIAKFRPISLCNFIYKIISKLLANRLKSHLHKIVSPFQGAFVKGRCIGDN 339
+LIPK+ +P +++FRPISLCN +YKI SK + RLK L I + Q AFV GR I DN
Sbjct: 497 ALIPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKRFLPCIATENQSAFVPGRLISDN 556
Query: 338 IGLTSEIFYNXXXXXXXXKGWMAVKLDMKKAFDQVEWDFLYKIMSKLGFGNKWIELIKQC 159
+ EIF+ KG MA+KLDM KA+D+VEW FL K++ +GF +W+ L+ C
Sbjct: 557 SLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSC 616
Query: 158 LETVSFRVLLNGVPLDNFTSRRGLRQGDPLSPYLFILVTEALSRML 21
+ TVS+ ++NG + T RGLRQGDPLSP+LFILV +A S+M+
Sbjct: 617 VATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMV 662
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 373 bits (957), Expect = e-100
Identities = 211/586 (36%), Positives = 320/586 (54%), Gaps = 5/586 (0%)
Frame = -3
Query: 1757 TQNHISGKITNFGYHGDWFFTLVYGEPVSCRRKKVWDEIRDFAPYIHGPWLLFGDFNAIS 1578
+Q+HI G I + W F +YG + W +R + P L+ GDFN I
Sbjct: 84 SQHHICGDIDDGAKK--WRFVGIYGWAKEEEKHHTWSLMRFLCEDLSRPILMGGDFNEIM 141
Query: 1577 SLNEKSGGHRVLSQSMHDFNDFISDLGLIDLGFRGSKFTWSNNRSFDNHILERLDRALAS 1398
S EK GG + + M+ F + + DL L DLG+ G TW S I ERLDR + S
Sbjct: 142 SYEEKEGGADRVRRGMYQFRETMDDLFLRDLGYNGVWHTWERGNSLSTCIRERLDRFVCS 201
Query: 1397 VSWFESFPHASVKTITNVSSDHLALSIRLSNVE--PSHRKPFRFCEMWLRDETCKEVIQN 1224
SW +P+ V SDHLA+ +R + S ++ F F WL D TC+E I++
Sbjct: 202 PSWATMYPNTIVDHSMRYKSDHLAICLRSNRTRRPTSKQRRFFFETSWLLDPTCEETIRD 261
Query: 1223 AWGSVDSVDYCRDSVIKKLGVTRKRLQNWNKNIFGNVLSEIRRVKKELETMMLGEMNEWK 1044
AW D DS+ +L + +L++W+ GN+ ++ RV+ +L + ++
Sbjct: 262 AW-----TDSAGDSLTGRLDLLALKLKSWSSEKGGNIGKQLGRVESDLCRLQQQPISSAN 316
Query: 1043 YKXXXXXXXXXXXXXXXEASLWRQKSGNNWIKDYARNTKYFHLSTVYRRRKNNITKLKDD 864
+ + + W +S ++D RNTKYFH R+++N + L D
Sbjct: 317 CEARLTLEKKLDELHAKQEARWYLRSRAMEVRDGDRNTKYFHHKASQRKKRNFVKGLFDA 376
Query: 863 GGVWREGREKVGEIINDFFSHLFTTSNPEPN--NDILHLFEPIITDRENSMLTVIPTDEE 690
G W E + + + D+F+ +FT++NP ND+L +P++T+ N+ L + EE
Sbjct: 377 SGTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLNDVLCCVDPVVTEECNTWLLKPFSKEE 436
Query: 689 IWDVVKKMGALKAPGPDGFQ*VFYQNCWDIVGETVVETVKNFFLLGILEPN-LNETFISL 513
++ + +M KAPGPDG +FYQ W I+G+ V + V + L G + P+ +N T I+L
Sbjct: 437 LYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSI-LHGSISPSCINHTNIAL 495
Query: 512 IPKIPNPDHIAKFRPISLCNFIYKIISKLLANRLKSHLHKIVSPFQGAFVKGRCIGDNIG 333
IPK+ NP A+FRPI+LCN +YK++SK L RLK L ++VS Q AFV GR I DN
Sbjct: 496 IPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNAL 555
Query: 332 LTSEIFYNXXXXXXXXKGWMAVKLDMKKAFDQVEWDFLYKIMSKLGFGNKWIELIKQCLE 153
+ E+F++ KG +A+KLDM KA+D+VEW FL K++ +GF +W+ LI C+
Sbjct: 556 IAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVS 615
Query: 152 TVSFRVLLNGVPLDNFTSRRGLRQGDPLSPYLFILVTEALSRMLHK 15
+VS+ ++NG + T RGLR GDPLSPYLFIL+ +A S+M+ K
Sbjct: 616 SVSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIADAFSKMIQK 661
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 361 bits (926), Expect = 4e-97
Identities = 207/575 (36%), Positives = 305/575 (53%), Gaps = 7/575 (1%)
Frame = -3
Query: 1712 GDWFFTLVYGEPVSCRRKKVWDEIRDFAPYIHGPWLLFGDFNAISSLNEKSGGHRVLSQS 1533
G+W FT +YG P + K + A PWL GDFN + +EK GG S+
Sbjct: 103 GEWRFTGIYGYPEEEHKDKTGALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSRE 162
Query: 1532 MHDFNDFISDLGLIDLGFRGSKFTWSNNRSFDNHILERLDRALASVSWFESFPHASVKTI 1353
F + + + +DLGF G +FTW+NNR D +I ERLDR +A+ W FP + V +
Sbjct: 163 ADIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHL 222
Query: 1352 TNVSSDHLALSIRLSNVEPS-----HRKPFRFCEMWLRDETCKEVIQNAW--GSVDSVDY 1194
SDH+ + + + + K FRF MWLR+ EV++ W G+ ++
Sbjct: 223 PKRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDEVVKETWMRGTDAGINL 282
Query: 1193 CRDSVIKKLGVTRKRLQNWNKNIFGNVLSEIRRVKKELETMMLGEMNEWKYKXXXXXXXX 1014
R T +L +W+K FG+V EIR + +++ +M E +E
Sbjct: 283 AR---------TANKLLSWSKQKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDAR 333
Query: 1013 XXXXXXXEASLWRQKSGNNWIKDYARNTKYFHLSTVYRRRKNNITKLKDDGGVWREGREK 834
E W Q+S +WIK +NTK+FH +R ++NN+ +++++ G W E +
Sbjct: 334 MDELEKREEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDD 393
Query: 833 VGEIINDFFSHLFTTSNPEPNNDILHLFEPIITDRENSMLTVIPTDEEIWDVVKKMGALK 654
V E +F +LF + N + IL++ +P ITD + L EE+ + +M K
Sbjct: 394 VTECFAHYFENLFQSGNNCEMDPILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNK 453
Query: 653 APGPDGFQ*VFYQNCWDIVGETVVETVKNFFLLGILEPNLNETFISLIPKIPNPDHIAKF 474
APGPDG +FYQ+ WD +GE V V N +N+T I LIPK + + F
Sbjct: 454 APGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDF 513
Query: 473 RPISLCNFIYKIISKLLANRLKSHLHKIVSPFQGAFVKGRCIGDNIGLTSEIFYNXXXXX 294
RPISLCN +YKI++K+LANR+K L ++ Q FV GR I DN+ + E F+
Sbjct: 514 RPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRKKK 573
Query: 293 XXXKGWMAVKLDMKKAFDQVEWDFLYKIMSKLGFGNKWIELIKQCLETVSFRVLLNGVPL 114
KG++ +KLDM KA+D+VEW FL +M KLGF ++ +L+ C+ + F VL+NG P
Sbjct: 574 TGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPS 633
Query: 113 DNFTSRRGLRQGDPLSPYLFILVTEALSRMLHKGE 9
NF RGLRQGDPLSP+LF++ E LS +L E
Sbjct: 634 RNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAE 668