BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000734
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317527.1| BED finger-nbs-lrr resistance protein [Popul...    66   3e-09
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    63   2e-08
ref|XP_002332548.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
emb|CAN65562.1| hypothetical protein VITISV_009359 [Vitis vinifera]    62   5e-08
ref|XP_003636521.1| Resistance protein RGC2, partial [Medicago t...    62   6e-08

>ref|XP_002317527.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222860592|gb|EEE98139.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1041

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
 Frame = -3

Query: 318  PFPAHGAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADGDESG 139
            PFP+ G F CL+  ++  C +IK LF S LL  L +LEVIEV  C ++EE++ A+ ++ G
Sbjct: 880  PFPSIGTFSCLRVFDVFNCPSIKKLFPSGLLPNLKHLEVIEVEFCDKMEEIIAAEEEDEG 939

Query: 138  AIP-----------------VLPRLHKLILDGLPKLKSNWSQLFMYSNSWQSVEIYNVKL 10
             I                   LP L  L L  L +LKS  S + +  +  +   +Y +KL
Sbjct: 940  GIMGEERNSSSRSIDASVEFRLPNLRLLKLRNLSELKSICSGVMICDSLQELDVVYCLKL 999

Query: 9    DRL 1
             RL
Sbjct: 1000 KRL 1002


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1075

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
 Frame = -3

Query: 309  AHGAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADGDESG--- 139
            ++G F  LK++ I  C ++K LFS  LL  L NLEVIEV +C Q+EE++  + +E G   
Sbjct: 911  SNGTFSHLKKVTIGECPSMKNLFSLDLLPNLTNLEVIEVDDCDQMEEIIAIEDEEEGMMV 970

Query: 138  ---------AIPVLPRLHKLILDGLPKLKS 76
                     A+  LP L  L L  LP+LKS
Sbjct: 971  EDSSSSSHYAVTSLPNLKVLKLSNLPELKS 1000


>ref|XP_002332548.1| predicted protein [Populus trichocarpa] gi|222832692|gb|EEE71169.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
 Frame = -3

Query: 303 GAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADGDE----SGA 136
           G F  LK+    GC+++K LF   LL  L+NLEVIEV  C ++EE++    DE    S  
Sbjct: 206 GIFSGLKKFYCSGCNSMKKLFPLVLLPSLVNLEVIEVRWCVEMEEIIGTRSDEESSCSSI 265

Query: 135 IPVLPRLHKLILDGLPKLKSNWSQLFMYSNSWQSVEIYNVKL 10
            P LP+L  L L  LPKLKS  S   +  +S Q + I N ++
Sbjct: 266 EPKLPKLRILYLTELPKLKSICS-AELICDSLQQIGITNCQM 306


>emb|CAN65562.1| hypothetical protein VITISV_009359 [Vitis vinifera]
          Length = 1460

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
 Frame = -3

Query: 486  LKKYFIQMESDIYPISQPQERSLCLSNSKGIPCNALRLPKSIQFLQVQHFARLSELPFPA 307
            LK   + +ES   P  Q    S+ L++S G    A  + +++   Q+ +   +    FPA
Sbjct: 767  LKLKHLNVESS--PEIQYIVNSMDLTSSHG----AFPVMETLSLNQLINLQEVCHGQFPA 820

Query: 306  HGAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADG-----DES 142
             G+F CL+++E+E CD +K LFS  + + L  LE I+V  C  + E +V+ G     +++
Sbjct: 821  -GSFGCLRKVEVEDCDGLKCLFSLSVARGLSRLEEIKVTRCKSMVE-IVSQGRKEIKEDA 878

Query: 141  GAIPVLPRLHKLILDGLPKLKS 76
              +P+ P L  L L+ LPKL +
Sbjct: 879  VNVPLFPELRSLTLEDLPKLSN 900


>ref|XP_003636521.1| Resistance protein RGC2, partial [Medicago truncatula]
           gi|355502456|gb|AES83659.1| Resistance protein RGC2,
           partial [Medicago truncatula]
          Length = 906

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = -3

Query: 366 SIQFLQVQHFARLSELPFPA--HGAFPCLKRLEIEGCDNIK-VLFSSRLLQQLLNLEVIE 196
           S + L++  +  L EL +    H AF  LK L +  CD +  VLF   L+  L+NLE ++
Sbjct: 25  SFKHLKLTEYPELKELWYGQLEHNAFRSLKHLVVHKCDFLSNVLFQPNLVGVLMNLEKLD 84

Query: 195 VGNCSQLEELVVADGD--ESGAIPVLPRLHKLILDGLPKLKSNWSQLFMYSNSWQSVEIY 22
           V NC+ LE +    G+  E  A+    +L KL L  LPKLK  W +   Y+  +Q++ + 
Sbjct: 85  VKNCNSLEAVFDLKGEFTEEIAVQNSTQLKKLKLSNLPKLKHVWKEDPHYTMRFQNLSVV 144

Query: 21  NV 16
           +V
Sbjct: 145 SV 146