BLASTX nr result
ID: Coptis24_contig00000734
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000734 (488 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317527.1| BED finger-nbs-lrr resistance protein [Popul... 66 3e-09 ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul... 63 2e-08 ref|XP_002332548.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 emb|CAN65562.1| hypothetical protein VITISV_009359 [Vitis vinifera] 62 5e-08 ref|XP_003636521.1| Resistance protein RGC2, partial [Medicago t... 62 6e-08 >ref|XP_002317527.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222860592|gb|EEE98139.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 1041 Score = 66.2 bits (160), Expect = 3e-09 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 17/123 (13%) Frame = -3 Query: 318 PFPAHGAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADGDESG 139 PFP+ G F CL+ ++ C +IK LF S LL L +LEVIEV C ++EE++ A+ ++ G Sbjct: 880 PFPSIGTFSCLRVFDVFNCPSIKKLFPSGLLPNLKHLEVIEVEFCDKMEEIIAAEEEDEG 939 Query: 138 AIP-----------------VLPRLHKLILDGLPKLKSNWSQLFMYSNSWQSVEIYNVKL 10 I LP L L L L +LKS S + + + + +Y +KL Sbjct: 940 GIMGEERNSSSRSIDASVEFRLPNLRLLKLRNLSELKSICSGVMICDSLQELDVVYCLKL 999 Query: 9 DRL 1 RL Sbjct: 1000 KRL 1002 >ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 1075 Score = 63.2 bits (152), Expect = 2e-08 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 12/90 (13%) Frame = -3 Query: 309 AHGAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADGDESG--- 139 ++G F LK++ I C ++K LFS LL L NLEVIEV +C Q+EE++ + +E G Sbjct: 911 SNGTFSHLKKVTIGECPSMKNLFSLDLLPNLTNLEVIEVDDCDQMEEIIAIEDEEEGMMV 970 Query: 138 ---------AIPVLPRLHKLILDGLPKLKS 76 A+ LP L L L LP+LKS Sbjct: 971 EDSSSSSHYAVTSLPNLKVLKLSNLPELKS 1000 >ref|XP_002332548.1| predicted protein [Populus trichocarpa] gi|222832692|gb|EEE71169.1| predicted protein [Populus trichocarpa] Length = 359 Score = 62.0 bits (149), Expect = 5e-08 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Frame = -3 Query: 303 GAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADGDE----SGA 136 G F LK+ GC+++K LF LL L+NLEVIEV C ++EE++ DE S Sbjct: 206 GIFSGLKKFYCSGCNSMKKLFPLVLLPSLVNLEVIEVRWCVEMEEIIGTRSDEESSCSSI 265 Query: 135 IPVLPRLHKLILDGLPKLKSNWSQLFMYSNSWQSVEIYNVKL 10 P LP+L L L LPKLKS S + +S Q + I N ++ Sbjct: 266 EPKLPKLRILYLTELPKLKSICS-AELICDSLQQIGITNCQM 306 >emb|CAN65562.1| hypothetical protein VITISV_009359 [Vitis vinifera] Length = 1460 Score = 62.0 bits (149), Expect = 5e-08 Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 5/142 (3%) Frame = -3 Query: 486 LKKYFIQMESDIYPISQPQERSLCLSNSKGIPCNALRLPKSIQFLQVQHFARLSELPFPA 307 LK + +ES P Q S+ L++S G A + +++ Q+ + + FPA Sbjct: 767 LKLKHLNVESS--PEIQYIVNSMDLTSSHG----AFPVMETLSLNQLINLQEVCHGQFPA 820 Query: 306 HGAFPCLKRLEIEGCDNIKVLFSSRLLQQLLNLEVIEVGNCSQLEELVVADG-----DES 142 G+F CL+++E+E CD +K LFS + + L LE I+V C + E +V+ G +++ Sbjct: 821 -GSFGCLRKVEVEDCDGLKCLFSLSVARGLSRLEEIKVTRCKSMVE-IVSQGRKEIKEDA 878 Query: 141 GAIPVLPRLHKLILDGLPKLKS 76 +P+ P L L L+ LPKL + Sbjct: 879 VNVPLFPELRSLTLEDLPKLSN 900 >ref|XP_003636521.1| Resistance protein RGC2, partial [Medicago truncatula] gi|355502456|gb|AES83659.1| Resistance protein RGC2, partial [Medicago truncatula] Length = 906 Score = 61.6 bits (148), Expect = 6e-08 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Frame = -3 Query: 366 SIQFLQVQHFARLSELPFPA--HGAFPCLKRLEIEGCDNIK-VLFSSRLLQQLLNLEVIE 196 S + L++ + L EL + H AF LK L + CD + VLF L+ L+NLE ++ Sbjct: 25 SFKHLKLTEYPELKELWYGQLEHNAFRSLKHLVVHKCDFLSNVLFQPNLVGVLMNLEKLD 84 Query: 195 VGNCSQLEELVVADGD--ESGAIPVLPRLHKLILDGLPKLKSNWSQLFMYSNSWQSVEIY 22 V NC+ LE + G+ E A+ +L KL L LPKLK W + Y+ +Q++ + Sbjct: 85 VKNCNSLEAVFDLKGEFTEEIAVQNSTQLKKLKLSNLPKLKHVWKEDPHYTMRFQNLSVV 144 Query: 21 NV 16 +V Sbjct: 145 SV 146