BLASTX nr result

ID: Coptis24_contig00000732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000732
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35995.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002281479.1| PREDICTED: uncharacterized protein LOC100263...   100   1e-19
emb|CAN65003.1| hypothetical protein VITISV_023489 [Vitis vinifera]   100   1e-19
ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communi...    99   5e-19
ref|XP_004142915.1| PREDICTED: uncharacterized protein LOC101214...    96   3e-18

>emb|CBI35995.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/60 (78%), Positives = 51/60 (85%)
 Frame = +3

Query: 99  SDGKHPDPEAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQ 278
           S G+HPD  A LS VPI+IVTHASQLP +FL PSP R LVIGFDCEGVDLCRHG+LCIMQ
Sbjct: 48  SGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCEGVDLCRHGSLCIMQ 107


>ref|XP_002281479.1| PREDICTED: uncharacterized protein LOC100263418 [Vitis vinifera]
          Length = 336

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/60 (78%), Positives = 51/60 (85%)
 Frame = +3

Query: 99  SDGKHPDPEAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQ 278
           S G+HPD  A LS VPI+IVTHASQLP +FL PSP R LVIGFDCEGVDLCRHG+LCIMQ
Sbjct: 17  SGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCEGVDLCRHGSLCIMQ 76


>emb|CAN65003.1| hypothetical protein VITISV_023489 [Vitis vinifera]
          Length = 393

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/60 (78%), Positives = 51/60 (85%)
 Frame = +3

Query: 99  SDGKHPDPEAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQ 278
           S G+HPD  A LS VPI+IVTHASQLP +FL PSP R LVIGFDCEGVDLCRHG+LCIMQ
Sbjct: 17  SGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCEGVDLCRHGSLCIMQ 76


>ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223544301|gb|EEF45822.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 342

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/78 (60%), Positives = 56/78 (71%)
 Frame = +3

Query: 45  MADMATDGSPELDGDDDISDGKHPDPEAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIG 224
           MA  ++     +    D    K  D EAQLS VPIH+VT ASQLP+EFL P+P++ L+IG
Sbjct: 1   MAASSSSHQTHIPLPSDSGGNKPLDHEAQLSLVPIHVVTDASQLPAEFLNPTPDKQLIIG 60

Query: 225 FDCEGVDLCRHGTLCIMQ 278
           FDCEGVDLCRHGTLCIMQ
Sbjct: 61  FDCEGVDLCRHGTLCIMQ 78


>ref|XP_004142915.1| PREDICTED: uncharacterized protein LOC101214970 [Cucumis sativus]
           gi|449522022|ref|XP_004168027.1| PREDICTED:
           uncharacterized protein LOC101223734 [Cucumis sativus]
          Length = 340

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +3

Query: 117 DPEAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQ 278
           DPEA  + VPIHIVTH SQLP EF++PSPE+ LV+GFDCEGVDLCRHG LC+MQ
Sbjct: 24  DPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 77


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