BLASTX nr result

ID: Coptis24_contig00000729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000729
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311836.1| predicted protein [Populus trichocarpa] gi|1...   371   e-100
gb|AFK47682.1| unknown [Medicago truncatula]                          368   2e-99
ref|XP_002517179.1| Stem-specific protein TSJT1, putative [Ricin...   367   3e-99
ref|XP_003529615.1| PREDICTED: stem-specific protein TSJT1-like ...   364   3e-98
ref|XP_002280658.1| PREDICTED: stem-specific protein TSJT1 [Viti...   363   4e-98

>ref|XP_002311836.1| predicted protein [Populus trichocarpa] gi|118485817|gb|ABK94756.1|
           unknown [Populus trichocarpa]
           gi|222851656|gb|EEE89203.1| predicted protein [Populus
           trichocarpa]
          Length = 236

 Score =  371 bits (953), Expect = e-100
 Identities = 188/239 (78%), Positives = 205/239 (85%)
 Frame = +2

Query: 155 MLGVFSSTIVTPPDELVAAGXXXXXXXXXXXXXXXXXXXXXXXXSSAVSVQVGDNVQLAY 334
           MLGVFSS IV+PPDELVAAG                        SSAVSV+VGD+ Q+A+
Sbjct: 1   MLGVFSSAIVSPPDELVAAGSRTPSPKISADALVKRFVDTN---SSAVSVRVGDDSQVAF 57

Query: 335 THHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANEVMLVIEAYKALRDRA 514
           THHN+S+ LPRSFAVKDEI+CLFEG L+NLGSL+QQYGLAKSANEV+LVIEAYKALRDRA
Sbjct: 58  THHNESMLLPRSFAVKDEIYCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRA 117

Query: 515 PYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITADGYVAFADDIELLKG 694
           PYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL+WGITADGYVAFAD+I+LLKG
Sbjct: 118 PYPPNHVVGHLSGSFAFIVFDKSTSTLFVASDQFGKVPLYWGITADGYVAFADNIDLLKG 177

Query: 695 ACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGATFKVEGPVVLAATE 871
           ACGKSLASFPQGCFFST  G LRS+ENPKNKITA+PAKEEEIWGATFKVEGP VLAATE
Sbjct: 178 ACGKSLASFPQGCFFSTTIGELRSFENPKNKITAVPAKEEEIWGATFKVEGPAVLAATE 236


>gb|AFK47682.1| unknown [Medicago truncatula]
          Length = 236

 Score =  368 bits (944), Expect = 2e-99
 Identities = 183/239 (76%), Positives = 204/239 (85%)
 Frame = +2

Query: 155 MLGVFSSTIVTPPDELVAAGXXXXXXXXXXXXXXXXXXXXXXXXSSAVSVQVGDNVQLAY 334
           MLG+FSS++V+PP+ELVAAG                        +SAVS+QVG++VQLAY
Sbjct: 1   MLGIFSSSVVSPPEELVAAGSRTPSPKTTANLLLKRFVERK---ASAVSLQVGEDVQLAY 57

Query: 335 THHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANEVMLVIEAYKALRDRA 514
           THH +S + PRSFAVKDEIFCLFEG L+NLGSL+QQYGL+KSANEV+L+IEAYKALRDRA
Sbjct: 58  THHEESPWQPRSFAVKDEIFCLFEGSLDNLGSLRQQYGLSKSANEVVLMIEAYKALRDRA 117

Query: 515 PYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITADGYVAFADDIELLKG 694
           PYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL+WGITADGYVAFADD +LLKG
Sbjct: 118 PYPANHVVGHLSGSFAFIVFDKSTSTLFVASDQSGKVPLYWGITADGYVAFADDADLLKG 177

Query: 695 ACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGATFKVEGPVVLAATE 871
           ACGKSLASFPQGCF+STA GGLR YENPKNKITA+PA EEEIWGATFKVEGP VLAATE
Sbjct: 178 ACGKSLASFPQGCFYSTAVGGLRCYENPKNKITAVPANEEEIWGATFKVEGPAVLAATE 236


>ref|XP_002517179.1| Stem-specific protein TSJT1, putative [Ricinus communis]
           gi|223543814|gb|EEF45342.1| Stem-specific protein TSJT1,
           putative [Ricinus communis]
          Length = 236

 Score =  367 bits (943), Expect = 3e-99
 Identities = 185/239 (77%), Positives = 202/239 (84%)
 Frame = +2

Query: 155 MLGVFSSTIVTPPDELVAAGXXXXXXXXXXXXXXXXXXXXXXXXSSAVSVQVGDNVQLAY 334
           MLGVFSS IV+PPDELVAAG                         SAVS+Q+GDN QLAY
Sbjct: 1   MLGVFSSAIVSPPDELVAAGSRTPSPKITSDALVKRFLDTNP---SAVSLQIGDNAQLAY 57

Query: 335 THHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANEVMLVIEAYKALRDRA 514
           THH++S+  PRSFAVKD+IFCLFEG L+NLGSLKQQYGLAKSANEV+LVIEAYKALRDRA
Sbjct: 58  THHSESLLQPRSFAVKDDIFCLFEGALDNLGSLKQQYGLAKSANEVVLVIEAYKALRDRA 117

Query: 515 PYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITADGYVAFADDIELLKG 694
           PYP NHVVGHLSGSFAF+VFD STSTLFVASDQ GKVPL+WGITADGYVAFAD+IELLKG
Sbjct: 118 PYPPNHVVGHLSGSFAFIVFDNSTSTLFVASDQFGKVPLYWGITADGYVAFADNIELLKG 177

Query: 695 ACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGATFKVEGPVVLAATE 871
           ACGKSLASFPQGCF+STA G LRS+ENPK+K+TA+PAKEEEIWGATFKVEGP VLAA E
Sbjct: 178 ACGKSLASFPQGCFYSTAVGELRSFENPKHKVTAVPAKEEEIWGATFKVEGPAVLAARE 236


>ref|XP_003529615.1| PREDICTED: stem-specific protein TSJT1-like [Glycine max]
          Length = 235

 Score =  364 bits (934), Expect = 3e-98
 Identities = 183/236 (77%), Positives = 198/236 (83%)
 Frame = +2

Query: 155 MLGVFSSTIVTPPDELVAAGXXXXXXXXXXXXXXXXXXXXXXXXSSAVSVQVGDNVQLAY 334
           MLGVFSS+IV+PPDELVAAG                         SAVSV+VG++VQLAY
Sbjct: 1   MLGVFSSSIVSPPDELVAAGSRTPSPKMTAAALRKRFEEKNP---SAVSVEVGEHVQLAY 57

Query: 335 THHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANEVMLVIEAYKALRDRA 514
           THHN+S F PRSFAVKDE+FCLFEG L+NLG+L+QQYGLAKS NEV+LVIEAYKALRDRA
Sbjct: 58  THHNESPFQPRSFAVKDEVFCLFEGALDNLGNLRQQYGLAKSVNEVLLVIEAYKALRDRA 117

Query: 515 PYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITADGYVAFADDIELLKG 694
           PYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL+WGITADGYVAFADD ELL G
Sbjct: 118 PYPANHVVGHLSGSFAFIVFDKSTSTLFVASDQYGKVPLYWGITADGYVAFADDAELLNG 177

Query: 695 ACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGATFKVEGPVVLA 862
           ACGKSLASFPQGCF+STA GGL  YENPKNKITA+PA EEEIWGATFKVEGPVV A
Sbjct: 178 ACGKSLASFPQGCFYSTAVGGLMCYENPKNKITAVPANEEEIWGATFKVEGPVVAA 233


>ref|XP_002280658.1| PREDICTED: stem-specific protein TSJT1 [Vitis vinifera]
           gi|297736991|emb|CBI26192.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  363 bits (933), Expect = 4e-98
 Identities = 187/239 (78%), Positives = 200/239 (83%)
 Frame = +2

Query: 155 MLGVFSSTIVTPPDELVAAGXXXXXXXXXXXXXXXXXXXXXXXXSSAVSVQVGDNVQLAY 334
           MLGVFSS+I++PPDELVAAG                         SAVSV VGD+VQLAY
Sbjct: 1   MLGVFSSSIMSPPDELVAAGCRTPSPKITAEALMNRFIQGNP---SAVSVHVGDHVQLAY 57

Query: 335 THHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANEVMLVIEAYKALRDRA 514
           THHN+S  LPRSFAVKDEIF LFEG L+NLGSL+QQYGLAKSANEV+LVIEAYKALRDRA
Sbjct: 58  THHNESPLLPRSFAVKDEIFSLFEGALDNLGSLRQQYGLAKSANEVVLVIEAYKALRDRA 117

Query: 515 PYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITADGYVAFADDIELLKG 694
           PYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL WGITADGYVAFADD ELLKG
Sbjct: 118 PYPPNHVVGHLSGSFAFIVFDKSTSTLFVASDQFGKVPLSWGITADGYVAFADDAELLKG 177

Query: 695 ACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGATFKVEGPVVLAATE 871
           ACGKSLASFPQGCFFSTA G LRS+ENPKNKITA+PA +EEIWGATFKVEGP V AAT+
Sbjct: 178 ACGKSLASFPQGCFFSTAVGELRSFENPKNKITAVPAPDEEIWGATFKVEGPAVFAATK 236


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