BLASTX nr result

ID: Coptis24_contig00000721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000721
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529470.1| conserved hypothetical protein [Ricinus comm...   176   6e-42
ref|XP_002321150.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
ref|NP_001235208.1| uncharacterized protein LOC100500241 [Glycin...   173   4e-41
ref|XP_004150752.1| PREDICTED: small ubiquitin-related modifier ...   172   6e-41
ref|XP_002301601.1| predicted protein [Populus trichocarpa] gi|2...   172   8e-41

>ref|XP_002529470.1| conserved hypothetical protein [Ricinus communis]
           gi|223531086|gb|EEF32936.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  176 bits (446), Expect = 6e-42
 Identities = 91/101 (90%), Positives = 92/101 (91%)
 Frame = +1

Query: 172 MSAVTNNQEEDKKPNDASGTAHINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEF 351
           MS VTN QEEDKKP D S  AHINLKVKGQDGNEVFFRIKRSTQL+KLM AYCDRQSVEF
Sbjct: 1   MSGVTN-QEEDKKPTDQSA-AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEF 58

Query: 352 NSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGFTA 474
           NSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG  A
Sbjct: 59  NSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGAAA 99


>ref|XP_002321150.1| predicted protein [Populus trichocarpa] gi|222861923|gb|EEE99465.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  174 bits (440), Expect = 3e-41
 Identities = 89/99 (89%), Positives = 91/99 (91%), Gaps = 1/99 (1%)
 Frame = +1

Query: 172 MSAVTNN-QEEDKKPNDASGTAHINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVE 348
           MS VT   QEEDKKPND S  AHINLKVKGQDGNEVFFRIKRSTQL+KLM AYCDRQSVE
Sbjct: 1   MSGVTGQPQEEDKKPNDQS--AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVE 58

Query: 349 FNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 465
           FNSIAFLFDGRRLRGEQTPDEL+MEDGDEIDAMLHQTGG
Sbjct: 59  FNSIAFLFDGRRLRGEQTPDELDMEDGDEIDAMLHQTGG 97


>ref|NP_001235208.1| uncharacterized protein LOC100500241 [Glycine max]
           gi|255629810|gb|ACU15255.1| unknown [Glycine max]
          Length = 99

 Score =  173 bits (439), Expect = 4e-41
 Identities = 86/98 (87%), Positives = 89/98 (90%)
 Frame = +1

Query: 172 MSAVTNNQEEDKKPNDASGTAHINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEF 351
           MS VTNN EEDKKP +    AHINLKVKGQDGNEVFFRIKRSTQL+KLM AYCDRQSV+F
Sbjct: 1   MSGVTNNNEEDKKPTEQG--AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDF 58

Query: 352 NSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 465
           NSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 59  NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 96


>ref|XP_004150752.1| PREDICTED: small ubiquitin-related modifier 2-like [Cucumis
           sativus] gi|449505442|ref|XP_004162471.1| PREDICTED:
           small ubiquitin-related modifier 2-like [Cucumis
           sativus]
          Length = 100

 Score =  172 bits (437), Expect = 6e-41
 Identities = 89/101 (88%), Positives = 91/101 (90%), Gaps = 1/101 (0%)
 Frame = +1

Query: 172 MSAVTNNQ-EEDKKPNDASGTAHINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVE 348
           MS VTN Q EEDKKPND S  AHINLKVKGQDGNEVFFRIKRSTQL+KLM AYCDRQSV+
Sbjct: 1   MSGVTNTQQEEDKKPNDQS--AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD 58

Query: 349 FNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGFT 471
            NSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG T
Sbjct: 59  LNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99


>ref|XP_002301601.1| predicted protein [Populus trichocarpa] gi|222843327|gb|EEE80874.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  172 bits (436), Expect = 8e-41
 Identities = 88/99 (88%), Positives = 90/99 (90%), Gaps = 1/99 (1%)
 Frame = +1

Query: 172 MSAVTNN-QEEDKKPNDASGTAHINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVE 348
           MS  T   QEEDKKPND S  AHINLKVKGQDGNEVFFRIKRSTQL+KLM AYCDRQSVE
Sbjct: 1   MSGATGQPQEEDKKPNDQS--AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVE 58

Query: 349 FNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 465
           FNSIAFLFDGRRLRGEQTPDEL+MEDGDEIDAMLHQTGG
Sbjct: 59  FNSIAFLFDGRRLRGEQTPDELDMEDGDEIDAMLHQTGG 97


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