BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000716
         (1376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635287.1| PREDICTED: U-box domain-containing protein 8...   432   e-119
ref|XP_004169145.1| PREDICTED: U-box domain-containing protein 8...   374   e-101
ref|XP_004134742.1| PREDICTED: U-box domain-containing protein 8...   374   e-101
ref|XP_002518593.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   372   e-101
ref|XP_002304973.1| predicted protein [Populus trichocarpa] gi|2...   364   3e-98

>ref|XP_003635287.1| PREDICTED: U-box domain-containing protein 8-like [Vitis vinifera]
            gi|359497783|ref|XP_003635641.1| PREDICTED: U-box
            domain-containing protein 8-like [Vitis vinifera]
            gi|147827038|emb|CAN62279.1| hypothetical protein
            VITISV_042771 [Vitis vinifera]
            gi|296084802|emb|CBI25940.3| unnamed protein product
            [Vitis vinifera]
          Length = 363

 Score =  432 bits (1112), Expect = e-119
 Identities = 229/359 (63%), Positives = 268/359 (74%), Gaps = 3/359 (0%)
 Frame = +3

Query: 36   MATPQFPDDFKCPISLEIMTDPVILSSGHTFDRSSIQRWIDSGNRICPLTKQTIPQNFTL 215
            MAT QFPDDFKCPISLEIM+DPVILSSGHTFDRSSIQRW+DSG+R CP+TK  + ++ +L
Sbjct: 1    MAT-QFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDSGHRTCPITKLPLSEHPSL 59

Query: 216  IPNHALRSLISNYTLCS---PQQNPEPQXXXXXXXXXXXXXXXXXXXLSQLNRLCKKSPV 386
            IPNHALRSLISNYTL S   PQ +PEPQ                   L QLN+  K++P 
Sbjct: 60   IPNHALRSLISNYTLVSAPKPQPHPEPQTLIATLTSPSSPLHSKLHSLDQLNQFSKRNPA 119

Query: 387  FRQRVMEYGAVSAVLSCVGXXXXXXXXXXXXXXXXXXXXXXXXVGLVAEGAIGRVVGALR 566
            FR+R+ E GAVSAVL+CVG                        VGLVAEGAIGR+V AL 
Sbjct: 120  FRRRLTESGAVSAVLNCVGSEDSSLQEKALSLLLNLSLDDDNKVGLVAEGAIGRIVAALH 179

Query: 567  GGNSSCRAYAATMLTSLAMVEVNKGTIGAYPFAIRTLVSLLRDGKAREKKEAATALYVLC 746
            G +  CRA AATMLTSLA+VEVN+ TIG YP+AIR LVSLLRDGK REKKEAATALY +C
Sbjct: 180  GRSPDCRAVAATMLTSLAVVEVNRATIGTYPYAIRALVSLLRDGKGREKKEAATALYAIC 239

Query: 747  SFPDNKKRVVESGAVPILIEMADSGVERAVEVLGLLAKCWEGREEMGRVDGCVAILVQVL 926
            SFPDN++R VE GAVPILI +ADSG+ERAVEVLGLLAKC EGREEM + +GCV ILV+VL
Sbjct: 240  SFPDNRRRAVECGAVPILIRIADSGLERAVEVLGLLAKCKEGREEMEKFNGCVKILVRVL 299

Query: 927  RNGSSRSVVNALSTMNSLCCYDEEVGLDVMRQGGLEICLGLVEDENEKISGNASALIQT 1103
            RNGSSR V  AL T+NSLC   + + L+ M++G LEIC+GLVED+NEK+  NAS+L+QT
Sbjct: 300  RNGSSRGVQYALMTLNSLCSNGDGMCLETMKEGVLEICMGLVEDDNEKVRRNASSLVQT 358


>ref|XP_004169145.1| PREDICTED: U-box domain-containing protein 8-like [Cucumis sativus]
          Length = 365

 Score =  374 bits (960), Expect = e-101
 Identities = 203/358 (56%), Positives = 251/358 (70%), Gaps = 4/358 (1%)
 Frame = +3

Query: 36   MATPQFPDDFKCPISLEIMTDPVILSSGHTFDRSSIQRWIDSGNRICPLTKQTIPQNFTL 215
            MA P +PDDFKCPISLEIM+DPVILSSGHTFDRSSIQRW+D+G+R CP+T+  +PQN +L
Sbjct: 1    MAAP-YPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSL 59

Query: 216  IPNHALRSLISNYTLCSPQQ----NPEPQXXXXXXXXXXXXXXXXXXXLSQLNRLCKKSP 383
            IPNHALRSLISN+   S  +    +P PQ                   L+QL R+ K+  
Sbjct: 60   IPNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDS 119

Query: 384  VFRQRVMEYGAVSAVLSCVGXXXXXXXXXXXXXXXXXXXXXXXXVGLVAEGAIGRVVGAL 563
              R+R+ E GAVSAVL CVG                        VGLVAEGAIG  V AL
Sbjct: 120  AVRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAAL 179

Query: 564  RGGNSSCRAYAATMLTSLAMVEVNKGTIGAYPFAIRTLVSLLRDGKAREKKEAATALYVL 743
            +  ++ CRA AATMLTSLA+VEVNK TIGAYP+A+R+LV LLR+G  RE+KEAATALY +
Sbjct: 180  QARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAI 239

Query: 744  CSFPDNKKRVVESGAVPILIEMADSGVERAVEVLGLLAKCWEGREEMGRVDGCVAILVQV 923
            CSFP N+ RVVE GAVPIL+++A+SG++RAVEVLG+LAKC EGREEM    GCV IL +V
Sbjct: 240  CSFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRV 299

Query: 924  LRNGSSRSVVNALSTMNSLCCYDEEVGLDVMRQGGLEICLGLVEDENEKISGNASALI 1097
            LRNGS R V  AL T+ SLCC+ E + ++  R+G L IC+ L++D++EKI  NA+ LI
Sbjct: 300  LRNGSPRGVQYALLTLASLCCHCERLCVEARREGILGICMTLIDDDSEKIRANAANLI 357


>ref|XP_004134742.1| PREDICTED: U-box domain-containing protein 8-like [Cucumis sativus]
          Length = 365

 Score =  374 bits (960), Expect = e-101
 Identities = 203/358 (56%), Positives = 251/358 (70%), Gaps = 4/358 (1%)
 Frame = +3

Query: 36   MATPQFPDDFKCPISLEIMTDPVILSSGHTFDRSSIQRWIDSGNRICPLTKQTIPQNFTL 215
            MA P +PDDFKCPISLEIM+DPVILSSGHTFDRSSIQRW+D+G+R CP+T+  +PQN +L
Sbjct: 1    MAAP-YPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSL 59

Query: 216  IPNHALRSLISNYTLCSPQQ----NPEPQXXXXXXXXXXXXXXXXXXXLSQLNRLCKKSP 383
            IPNHALRSLISN+   S  +    +P PQ                   L+QL R+ K+  
Sbjct: 60   IPNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDS 119

Query: 384  VFRQRVMEYGAVSAVLSCVGXXXXXXXXXXXXXXXXXXXXXXXXVGLVAEGAIGRVVGAL 563
              R+R+ E GAVSAVL CVG                        VGLVAEGAIG  V AL
Sbjct: 120  AVRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAAL 179

Query: 564  RGGNSSCRAYAATMLTSLAMVEVNKGTIGAYPFAIRTLVSLLRDGKAREKKEAATALYVL 743
            +  ++ CRA AATMLTSLA+VEVNK TIGAYP+A+R+LV LLR+G  RE+KEAATALY +
Sbjct: 180  QARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAI 239

Query: 744  CSFPDNKKRVVESGAVPILIEMADSGVERAVEVLGLLAKCWEGREEMGRVDGCVAILVQV 923
            CSFP N+ RVVE GAVPIL+++A+SG++RAVEVLG+LAKC EGREEM    GCV IL +V
Sbjct: 240  CSFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRV 299

Query: 924  LRNGSSRSVVNALSTMNSLCCYDEEVGLDVMRQGGLEICLGLVEDENEKISGNASALI 1097
            LRNGS R V  AL T+ SLCC+ E + ++  R+G L IC+ L++D++EKI  NA+ LI
Sbjct: 300  LRNGSPRGVQYALLTLASLCCHCERLCVEARREGILGICMTLIDDDSEKIRANAANLI 357


>ref|XP_002518593.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223542438|gb|EEF43980.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 374

 Score =  372 bits (956), Expect = e-101
 Identities = 199/361 (55%), Positives = 245/361 (67%), Gaps = 11/361 (3%)
 Frame = +3

Query: 54   PDDFKCPISLEIMTDPVILSSGHTFDRSSIQRWIDSGNRICPLTKQTIPQNFTLIPNHAL 233
            P+DFKCPISLEIM+DPVILSSGHTFDRSSIQRW+DSG+R CP+TK  +P++  LIPNHAL
Sbjct: 6    PEDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDSGHRTCPITKLPLPEHPPLIPNHAL 65

Query: 234  RSLISNYTLC-----------SPQQNPEPQXXXXXXXXXXXXXXXXXXXLSQLNRLCKKS 380
            RSLISN+TL             P ++P  Q                   LS+L R+ K  
Sbjct: 66   RSLISNFTLLFSSKLQHPNTPPPPKSPNTQTLISTLTSPSSPLNSKLDSLSRLIRITKLD 125

Query: 381  PVFRQRVMEYGAVSAVLSCVGXXXXXXXXXXXXXXXXXXXXXXXXVGLVAEGAIGRVVGA 560
            P  R+++ E GAVSAVL+CV                         VGLVAEGAI RVV  
Sbjct: 126  PFLRRQLTESGAVSAVLNCVNSPELALQEKALTLLLNLSLDDDNKVGLVAEGAIRRVVAI 185

Query: 561  LRGGNSSCRAYAATMLTSLAMVEVNKGTIGAYPFAIRTLVSLLRDGKAREKKEAATALYV 740
            LR G+  CRA   T+LTSLA+VEVNK TIGAYP AI+ LVS+L  GK RE KE+ATALY 
Sbjct: 186  LRSGSPDCRAIGCTILTSLAVVEVNKATIGAYPNAIQALVSILSCGKGREVKESATALYA 245

Query: 741  LCSFPDNKKRVVESGAVPILIEMADSGVERAVEVLGLLAKCWEGREEMGRVDGCVAILVQ 920
            +CSF DN++R VE GAVPIL+ +   G+ERAVEVL +L KC EGREEM R++GCV +LV 
Sbjct: 246  ICSFVDNRRRAVEFGAVPILVRICGMGLERAVEVLNVLVKCKEGREEMVRINGCVKVLVN 305

Query: 921  VLRNGSSRSVVNALSTMNSLCCYDEEVGLDVMRQGGLEICLGLVEDENEKISGNASALIQ 1100
            V++NGSSR +  AL T+N LCCY  ++ L+ +++G LEIC+ LVEDENEKI  NAS+L+Q
Sbjct: 306  VIKNGSSRGLQCALFTLNCLCCYSLDICLEAIKEGVLEICVRLVEDENEKIMRNASSLVQ 365

Query: 1101 T 1103
            T
Sbjct: 366  T 366


>ref|XP_002304973.1| predicted protein [Populus trichocarpa] gi|222847937|gb|EEE85484.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  364 bits (935), Expect = 3e-98
 Identities = 194/355 (54%), Positives = 243/355 (68%)
 Frame = +3

Query: 36   MATPQFPDDFKCPISLEIMTDPVILSSGHTFDRSSIQRWIDSGNRICPLTKQTIPQNFTL 215
            MAT   PDDFKCPISLEIM+DPVILSSGHTFDRSSIQRW+DSG+R CP+TK  +P++  L
Sbjct: 1    MAT-HIPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDSGHRSCPITKLPLPEHPRL 59

Query: 216  IPNHALRSLISNYTLCSPQQNPEPQXXXXXXXXXXXXXXXXXXXLSQLNRLCKKSPVFRQ 395
            IPNHALRSLIS++T+   Q +P P                    LSQL RL K  P  R+
Sbjct: 60   IPNHALRSLISSFTIQKSQPDPNP-----------------LHSLSQLTRLTKLDPCLRR 102

Query: 396  RVMEYGAVSAVLSCVGXXXXXXXXXXXXXXXXXXXXXXXXVGLVAEGAIGRVVGALRGGN 575
            ++ E GAVS +L+CV                         VGLVAEG IGRV+  +R G+
Sbjct: 103  QITESGAVSTILNCVDSTESEIQEKALALLLNLSLDDDNKVGLVAEGVIGRVINVIRVGS 162

Query: 576  SSCRAYAATMLTSLAMVEVNKGTIGAYPFAIRTLVSLLRDGKAREKKEAATALYVLCSFP 755
             S RA   TMLTSLA+VEVNK TIGAYP  I+TL+ +L +GK RE +EAATALY +CSF 
Sbjct: 163  PSSRAIGCTMLTSLAVVEVNKATIGAYPNGIKTLIWVLYNGKGREVREAATALYAICSFV 222

Query: 756  DNKKRVVESGAVPILIEMADSGVERAVEVLGLLAKCWEGREEMGRVDGCVAILVQVLRNG 935
            DN+KR VE GAVPIL+++   G+ERAVEVL LL KC EGREE+ +V+GC+ +LV+V+RNG
Sbjct: 223  DNRKRAVECGAVPILMKIGGMGLERAVEVLSLLVKCKEGREEIRKVNGCLEVLVKVIRNG 282

Query: 936  SSRSVVNALSTMNSLCCYDEEVGLDVMRQGGLEICLGLVEDENEKISGNASALIQ 1100
            S R V  AL T+N LC + EE+ ++  + G LEIC+G ++DENEKI  NA+ L+Q
Sbjct: 283  SERGVQCALFTLNCLCSFAEEMRVEAKKDGVLEICVGFLDDENEKIRRNAANLVQ 337