BLASTX nr result

ID: Coptis24_contig00000711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000711
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261...   109   2e-21
emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]   100   1e-18
ref|XP_002517157.1| chloroplast-targeted copper chaperone, putat...    97   2e-17
ref|XP_002311833.1| predicted protein [Populus trichocarpa] gi|2...    94   7e-17
ref|XP_004173131.1| PREDICTED: uncharacterized LOC101204739 [Cuc...    93   2e-16

>ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261454 [Vitis vinifera]
          Length = 491

 Score =  109 bits (272), Expect = 2e-21
 Identities = 76/162 (46%), Positives = 85/162 (52%), Gaps = 31/162 (19%)
 Frame = +1

Query: 694  VQVMNNMMHHGFNGIDITHGLGGENVGQM-----GNIPMPQMGNFPMGHMGN-IPAVQGL 855
            V  +NNM +   N   I  GLGG N+GQM     GN+PM QMGN  M  MGN +PAVQGL
Sbjct: 332  VHAINNMPNAMHNMAAI-RGLGGGNMGQMPMGPMGNMPMGQMGNMSMAQMGNNMPAVQGL 390

Query: 856  PAPPMNAGAGG--------------YFQGAAPEYHAGNPYH------XXXXXXXXXXXXX 975
            PA  +NAG  G              YFQGA PE  AGNPY+                   
Sbjct: 391  PAGAINAGGAGGGAPPGYGGGVPPGYFQGAGPEVMAGNPYYQQQLAAMMMNQQRAHGNER 450

Query: 976  XXXXXYARPPPAV----AYTPSPEPYT-YFSDENTSSSCNVM 1086
                 YARPPPAV     Y P P+PYT +FSDENT SSCNVM
Sbjct: 451  FQPMMYARPPPAVNYLPPYPPQPDPYTHFFSDENT-SSCNVM 491


>emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]
          Length = 136

 Score =  100 bits (249), Expect = 1e-18
 Identities = 65/137 (47%), Positives = 73/137 (53%), Gaps = 26/137 (18%)
 Frame = +1

Query: 754  LGGENVGQMGNIPMPQMGNFPMGHMGN-IPAVQGLPAPPMNAGA--------------GG 888
            +G   +G MGN+PM QMGN  M  MGN +PAVQGLPA  +NAG                G
Sbjct: 1    MGQMPMGPMGNMPMGQMGNMSMAQMGNNMPAVQGLPAGAINAGGVSGGAPPGYGGGVPPG 60

Query: 889  YFQGAAPEYHAGNPYHXXXXXXXXXXXXXXXXXX------YARPPPAV----AYTPSPEP 1038
            YFQGA PE  AGNPY+                        YARPPPAV     Y P P+P
Sbjct: 61   YFQGAGPEVMAGNPYYQQQLAAMMMNQQRAHGNERFQPMMYARPPPAVNYLPPYPPQPDP 120

Query: 1039 YT-YFSDENTSSSCNVM 1086
            YT +FSDENT SSCNVM
Sbjct: 121  YTHFFSDENT-SSCNVM 136


>ref|XP_002517157.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
            gi|223543792|gb|EEF45320.1| chloroplast-targeted copper
            chaperone, putative [Ricinus communis]
          Length = 526

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 65/144 (45%), Positives = 69/144 (47%), Gaps = 38/144 (26%)
 Frame = +1

Query: 769  VGQMGNIPMP--QMGNFPMGHMGNIPAVQGLPAPPM------NAGAGGYFQGAAPEYHAG 924
            +G MGN+ MP  QMGN PMG MGNIPAVQGLPA          AG  GYFQGA P+   G
Sbjct: 385  MGPMGNLNMPMGQMGNMPMGQMGNIPAVQGLPAGAAMGGGGPGAGGNGYFQGAGPDLMPG 444

Query: 925  NPYH----------XXXXXXXXXXXXXXXXXXYARPPPAVAYTPSPEPYTY--------- 1047
            NPYH                            YARPPPAV Y P P PY+Y         
Sbjct: 445  NPYHHQQQQQQYLQAIMNQQRAMGNERFQPMMYARPPPAVNYMP-PYPYSYAPPPHQGSD 503

Query: 1048 -----------FSDENTSSSCNVM 1086
                       FSDENT SSCNVM
Sbjct: 504  PYXXSDPYTNFFSDENT-SSCNVM 526


>ref|XP_002311833.1| predicted protein [Populus trichocarpa] gi|222851653|gb|EEE89200.1|
            predicted protein [Populus trichocarpa]
          Length = 505

 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 71/183 (38%), Positives = 77/183 (42%), Gaps = 56/183 (30%)
 Frame = +1

Query: 706  NNMMHHGFNGIDITHGLGGE-------------NVGQMGNIPMPQMGNFPMGHMGNIPAV 846
            NNM  +G  G    +G+GG              N+GQMG +PM QMG  PMG MG IPAV
Sbjct: 326  NNMQMNG--GKKGNNGVGGALNDGFQKVGGPQVNMGQMGGMPMGQMGGMPMGQMGGIPAV 383

Query: 847  QGLPAP-----PMNAGAGGYFQGAAPEYHAGNPYH---------------XXXXXXXXXX 966
            QGLPA          GA GYFQGA P+   GNPY                          
Sbjct: 384  QGLPAAAAMGGAAGGGANGYFQGAGPDLLPGNPYQQQQQQQHIAAMTAMMNQQRAAMGGG 443

Query: 967  XXXXXXXXYARPPPAVAYT---PSPEPYTY--------------------FSDENTSSSC 1077
                    YARPPPAV Y    P P PY Y                    FSDENT SSC
Sbjct: 444  NERFQPMMYARPPPAVNYMPQHPQPHPYPYPYPYPHPHPHPNGNDQYTNFFSDENT-SSC 502

Query: 1078 NVM 1086
            NVM
Sbjct: 503  NVM 505


>ref|XP_004173131.1| PREDICTED: uncharacterized LOC101204739 [Cucumis sativus]
          Length = 550

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 73/163 (44%), Positives = 75/163 (46%), Gaps = 34/163 (20%)
 Frame = +1

Query: 700  VMNNMMHHGFNGIDITHGL--GGENVGQMG-----------NIPMPQMGNFPMGHMGNIP 840
            VMN    HGF  I    GL  GG   G  G           N+PM QMGN  M  MG+IP
Sbjct: 390  VMNGGGPHGFPSIGGHPGLPAGGLAAGGAGGGGGGGRPMNLNMPMAQMGNMQMSQMGSIP 449

Query: 841  AVQGLPAPPMNAGAGG--YFQGA--APEYHAGNPY----HXXXXXXXXXXXXXXXXXXYA 996
            AVQGLPAP MN G  G  YFQGA    E   GNPY                       YA
Sbjct: 450  AVQGLPAPAMNGGGPGSAYFQGAPGPAEAMGGNPYQQQQQYMAAMNHQRAAMANQAMMYA 509

Query: 997  RPPPAVAYTPSPEPYTY-------------FSDENTSSSCNVM 1086
            RPPPAV Y P P PY Y             FSDENT SSCNVM
Sbjct: 510  RPPPAVNYLP-PYPYPYPPPPPAGDNYTHFFSDENT-SSCNVM 550


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