BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000695
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-55
emb|CBI25186.3| unnamed protein product [Vitis vinifera]              220   1e-55
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,...   211   9e-53
ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containi...   198   5e-49

>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Vitis vinifera]
          Length = 537

 Score =  220 bits (561), Expect = 1e-55
 Identities = 107/191 (56%), Positives = 141/191 (73%)
 Frame = -3

Query: 577 LIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNSMILPLCEAHNLEEAKSVFATMASMG 398
           LIYVLT ENCL EA  I+ KIKE GL  DS +YN MI PLC+A  LEEA+++ A M    
Sbjct: 323 LIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIGEN 382

Query: 397 LDPTSETYHAFLQVESVDATVELLKQMREAGYGPDGHTFLLILRKLLKSKQPDNALRMWV 218
           L PT+ETYHAFL+  S + T E+LK +R AG+GP+G TFLLIL  L K  QP+NAL++WV
Sbjct: 383 LGPTTETYHAFLEGASYEETFEVLKNLRTAGFGPNGDTFLLILDNLFKLDQPENALKIWV 442

Query: 217 EMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYDDMKSRGFPDDPKLEKVLKDPVGSVG 38
           EM ++++VP S HY V++ GL+  GWL KAR+ Y +M+S+GF DDPKL+K+LKDPV   G
Sbjct: 443 EMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDPKLKKLLKDPV--EG 500

Query: 37  EFGKQQGRHRE 5
           + G+++G  R+
Sbjct: 501 DSGEREGWMRQ 511


>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  220 bits (561), Expect = 1e-55
 Identities = 107/191 (56%), Positives = 141/191 (73%)
 Frame = -3

Query: 577 LIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNSMILPLCEAHNLEEAKSVFATMASMG 398
           LIYVLT ENCL EA  I+ KIKE GL  DS +YN MI PLC+A  LEEA+++ A M    
Sbjct: 323 LIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIRPLCKAKKLEEARTILAAMIGEN 382

Query: 397 LDPTSETYHAFLQVESVDATVELLKQMREAGYGPDGHTFLLILRKLLKSKQPDNALRMWV 218
           L PT+ETYHAFL+  S + T E+LK +R AG+GP+G TFLLIL  L K  QP+NAL++WV
Sbjct: 383 LGPTTETYHAFLEGASYEETFEVLKNLRTAGFGPNGDTFLLILDNLFKLDQPENALKIWV 442

Query: 217 EMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYDDMKSRGFPDDPKLEKVLKDPVGSVG 38
           EM ++++VP S HY V++ GL+  GWL KAR+ Y +M+S+GF DDPKL+K+LKDPV   G
Sbjct: 443 EMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMRSKGFLDDPKLKKLLKDPV--EG 500

Query: 37  EFGKQQGRHRE 5
           + G+++G  R+
Sbjct: 501 DSGEREGWMRQ 511


>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 552

 Score =  211 bits (536), Expect = 9e-53
 Identities = 104/178 (58%), Positives = 128/178 (71%), Gaps = 2/178 (1%)
 Frame = -3

Query: 577 LIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNSMILPLCEAHNLEEAKSVFATMASMG 398
           LIYVLTRENC  EA   +DK+KE GL  DSTTYNSMI PLCE   L EA+SV ATM    
Sbjct: 335 LIYVLTRENCFKEALRFLDKMKEVGLQPDSTTYNSMIRPLCEGKKLVEARSVLATMIEEN 394

Query: 397 LDPTSETYHAFLQVESVD--ATVELLKQMREAGYGPDGHTFLLILRKLLKSKQPDNALRM 224
           + PT ETYHA L+VE+ D  AT+E+L +M  AG  P   TFLL+L K  K +Q +NAL+M
Sbjct: 395 ISPTMETYHALLEVENSDFEATLEVLNRMTVAGLAPTDDTFLLVLAKFFKLEQAENALKM 454

Query: 223 WVEMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYDDMKSRGFPDDPKLEKVLKDPV 50
           W+EM +YE+ P+  HY ++V GL  CG LAKAR+ Y DM+S GF DDPKL+K+LK+PV
Sbjct: 455 WIEMKQYEVTPNLTHYKILVEGLVRCGLLAKARECYADMRSNGFTDDPKLQKMLKEPV 512


>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  206 bits (525), Expect = 2e-51
 Identities = 100/187 (53%), Positives = 132/187 (70%)
 Frame = -3

Query: 577 LIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNSMILPLCEAHNLEEAKSVFATMASMG 398
           L+Y+LTRENC  EA  I+DK+KE GL  DS TYNSMI PLCEA  LE+A+S+ A M    
Sbjct: 236 LVYILTRENCFKEALKILDKMKETGLQRDSATYNSMIRPLCEAKKLEDARSLMAAMIEEN 295

Query: 397 LDPTSETYHAFLQVESVDATVELLKQMREAGYGPDGHTFLLILRKLLKSKQPDNALRMWV 218
           + PT ETYHAFLQ    + T E+L +M+ AG GP   TFLL+L K  K +QP+NAL++WV
Sbjct: 296 VSPTIETYHAFLQGIVFEETFEVLDRMKIAGLGPTEDTFLLLLAKFFKLEQPENALKIWV 355

Query: 217 EMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYDDMKSRGFPDDPKLEKVLKDPVGSVG 38
           EM +YE+  +  HY+VMV GL+ CG L KAR++Y +M+S G+ DDPK++K+LK PV    
Sbjct: 356 EMKQYEVASNLTHYTVMVEGLARCGLLTKAREYYAEMRSNGYSDDPKIQKMLKVPVQDKN 415

Query: 37  EFGKQQG 17
           +  K+ G
Sbjct: 416 DKRKKLG 422


>ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
           gi|449509164|ref|XP_004163514.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
          Length = 547

 Score =  198 bits (504), Expect = 5e-49
 Identities = 99/193 (51%), Positives = 131/193 (67%), Gaps = 1/193 (0%)
 Frame = -3

Query: 577 LIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNSMILPLCEAHNLEEAKSVFATMASMG 398
           L YVLTRENC NEA  I++KIKE GL  DSTTYNS+I PLCEA  L+EAK V   M    
Sbjct: 327 LAYVLTRENCFNEALKILEKIKEVGLRPDSTTYNSLISPLCEAGKLDEAKDVLTMMTEDN 386

Query: 397 LDPTSETYHAFLQVESVDATVELLKQMREAGYGPDGHTFLLILRKLLKSKQPDNALRMWV 218
           + PT ETYH+F+Q      + ELLK+MR+ G GP   TFL++  K  + ++P+ AL +WV
Sbjct: 387 ISPTIETYHSFIQAADSKMSFELLKRMRQDGLGPTEGTFLIMFNKSFELEEPEYALNVWV 446

Query: 217 EMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYDDMKSRGFPDDPKLEKVLKDP-VGSV 41
           EM RYE+ P   HYSV+++GL+ CG L KAR+ YD+M   GF   PK++ +LK+P +GS+
Sbjct: 447 EMKRYEVFPSCEHYSVLIQGLATCGHLKKARELYDEMILHGFIAHPKIKTLLKEPDLGSI 506

Query: 40  GEFGKQQGRHREE 2
            E  +QQ RH  +
Sbjct: 507 DE-ARQQVRHNNK 518