BLASTX nr result

ID: Coptis24_contig00000686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000686
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-37
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   109   5e-37
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]    97   9e-33
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...    97   9e-33
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...    88   5e-31

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  108 bits (270), Expect(2) = 2e-37
 Identities = 53/122 (43%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
 Frame = -2

Query: 564 CDACGEQVTGFRYNCTACDLDFHILCVSMPLSLKHQAHPHTLNLAFNSPYQTKGFSCDIX 385
           CD CG Q  GF Y+CT CD D H++C + PLSL HQ+HPH LNLAF  PYQTKGFSCDI 
Sbjct: 89  CDGCGLQGNGFNYHCTTCDFDVHMMCATNPLSLAHQSHPHQLNLAFYPPYQTKGFSCDI- 147

Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNACEFDVHLNCATS--NPRVSEIRHQIR 211
                                          C+ACEFD H+ CA S  N  +  ++H   
Sbjct: 148 -------------------CHKIGSNHWLYRCSACEFDAHMKCAMSVNNTPLPHVQHSNS 188

Query: 210 VP 205
           +P
Sbjct: 189 LP 190



 Score = 74.3 bits (181), Expect(2) = 2e-37
 Identities = 29/59 (49%), Positives = 39/59 (66%)
 Frame = -1

Query: 847 YPSTCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFPQDS 671
           Y ++CS CNL+ S W+Y+CK C + LHI C+Q+P +I HP  P H L L S P +P  S
Sbjct: 28  YMNSCSACNLQPSGWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPGGS 86



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
 Frame = -2

Query: 585 QGLAVPLCDACGEQVTGFRYNCTACDLDFHILCVSMPLSLKHQAHP-HTLNLAFNSPYQT 409
           Q L +  C AC  Q +G+ Y+C  C+   HI C  MP  + H  HP H L L     Y  
Sbjct: 25  QSLYMNSCSACNLQPSGWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPG 84

Query: 408 KGFSCDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNACEFDVHLNCATS 247
             F+CD                                 C  C+FDVH+ CAT+
Sbjct: 85  GSFNCD---------------------GCGLQGNGFNYHCTTCDFDVHMMCATN 117


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score =  109 bits (272), Expect(2) = 5e-37
 Identities = 74/215 (34%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
 Frame = -2

Query: 564 CDACGEQVTGFRYNCTACDLDFHILCVSMPLSLKHQAHPHTLNLAFNSPYQTKGFSCDIX 385
           CDACG    GF Y+C  C  D H  C   PLSL +Q HPH L L F+ PY TKGFSCDI 
Sbjct: 90  CDACGHGGLGFGYHCNHCSFDIHTTCAQNPLSLTNQFHPHLLQLTFDPPYHTKGFSCDI- 148

Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNACEFDVHLNCA-----TSNPRVSEIRH 220
                                          C  CEFD HL CA      +  ++S+ + 
Sbjct: 149 -------------------CQKIGSNHWLYRCAPCEFDAHLECAMGAVPVAAQQLSQYQP 189

Query: 219 QIRVPKPEVPRHYHNSFPG---SSQRQF*PNYYANIPSSSS---------------AQPA 94
           Q + P+P+    +HNSFPG   S Q Q   N   N P + S                QPA
Sbjct: 190 QPQ-PQPQPQLQHHNSFPGAIISHQYQQYGNRVVNPPPAQSFFAQSQNMGTTQGCYQQPA 248

Query: 93  ---------*MTKNLVEGVAQHVDLNFAQSFSGGG 16
                     + +  V G AQH+  N  QS  GGG
Sbjct: 249 VGNNNTIMDVLVQGFVNGAAQHLGQNLVQSIMGGG 283



 Score = 72.0 bits (175), Expect(2) = 5e-37
 Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = -1

Query: 847 YPST-CSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFP 680
           YP T CS C L SS W+Y+C  C + LH+ CSQ+P +I HP+ P H L+L+  P +P
Sbjct: 28  YPITHCSACQLESSGWMYSCNPCNFTLHLSCSQLPSLITHPSHPNHTLDLLPSPIYP 84



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
 Frame = -2

Query: 564 CDACGEQVTGFRYNCTACDLDFHILCVSMPLSLKHQAHP-HTLNLAFNSPYQTKGFSCDI 388
           C AC  + +G+ Y+C  C+   H+ C  +P  + H +HP HTL+L  +  Y    FSCD 
Sbjct: 33  CSACQLESSGWMYSCNPCNFTLHLSCSQLPSLITHPSHPNHTLDLLPSPIYPNGVFSCD- 91

Query: 387 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNACEFDVHLNCATSNP 241
                                           CN C FD+H  CA  NP
Sbjct: 92  --------------------ACGHGGLGFGYHCNHCSFDIHTTCA-QNP 119


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score = 97.4 bits (241), Expect(2) = 9e-33
 Identities = 46/108 (42%), Positives = 56/108 (51%)
 Frame = -2

Query: 564 CDACGEQVTGFRYNCTACDLDFHILCVSMPLSLKHQAHPHTLNLAFNSPYQTKGFSCDIX 385
           CDACG+Q  GF Y+C  C++D HILC S PL L HQ+H H L L+F+ PY  K FSCDI 
Sbjct: 100 CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNKSFSCDI- 158

Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNACEFDVHLNCATSNP 241
                                          C+ CEFD HL+CAT+ P
Sbjct: 159 -------------------CRQIGTSHWLYRCDECEFDAHLSCATATP 187



 Score = 69.7 bits (169), Expect(2) = 9e-33
 Identities = 29/55 (52%), Positives = 38/55 (69%)
 Frame = -1

Query: 841 STCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFPQ 677
           ++CSGC L++S  IY CK C Y LHI CSQ+PQ I H     HAL+L+  PA+P+
Sbjct: 41  ASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITHSFHKAHALSLLPNPAYPE 95


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score = 97.4 bits (241), Expect(2) = 9e-33
 Identities = 46/108 (42%), Positives = 56/108 (51%)
 Frame = -2

Query: 564 CDACGEQVTGFRYNCTACDLDFHILCVSMPLSLKHQAHPHTLNLAFNSPYQTKGFSCDIX 385
           CDACG+Q  GF Y+C  C++D HILC S PL L HQ+H H L L+F+ PY  K FSCDI 
Sbjct: 94  CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNKSFSCDI- 152

Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNACEFDVHLNCATSNP 241
                                          C+ CEFD HL+CAT+ P
Sbjct: 153 -------------------CRQIGTSHWLYRCDECEFDAHLSCATATP 181



 Score = 69.7 bits (169), Expect(2) = 9e-33
 Identities = 29/55 (52%), Positives = 38/55 (69%)
 Frame = -1

Query: 841 STCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFPQ 677
           ++CSGC L++S  IY CK C Y LHI CSQ+PQ I H     HAL+L+  PA+P+
Sbjct: 35  ASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITHSFHKAHALSLLPNPAYPE 89


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 87.8 bits (216), Expect(2) = 5e-31
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
 Frame = -2

Query: 564 CDACGEQVTGFRYNCTACDLDFHILCVSMPLSLKHQAHPHTLNLAFNSPYQTKGFSCDIX 385
           CDACG+Q  GF Y+C  C++  H  C +MPL L HQ+H H LNL   +PY    FSCD+ 
Sbjct: 94  CDACGKQGNGFSYHCGTCNIYIHTTCAAMPLVLTHQSHHHQLNLTPFAPYPNMSFSCDM- 152

Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNACEFDVHLNCATSNPRVSEIR---HQI 214
                                          CN C FD HL+CA S P  ++ +   +Q 
Sbjct: 153 -------------------CHNFGSKQWLYRCNLCGFDAHLDCAVSQPNPAQAQAQYYQS 193

Query: 213 RVPKPEVPRHYHNSFP---GSSQRQF*PNYYANIPSSSS 106
             P   +P++     P   G   +   PN Y    ++S+
Sbjct: 194 TAPASGIPQYQAVGTPLATGPVMQNLAPNNYVPKAATSN 232



 Score = 73.6 bits (179), Expect(2) = 5e-31
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = -1

Query: 841 STCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFPQD 674
           ++CSGC L+ S WIY C  C Y LH+ CSQ+PQ I HP    H L+L+S P +P D
Sbjct: 35  ASCSGCKLKISGWIYACTQCNYFLHVSCSQMPQQITHPYHQNHVLSLLSTPMYPGD 90


Top