BLASTX nr result

ID: Coptis24_contig00000679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000679
         (2045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcr...   417   e-114
ref|XP_004134338.1| PREDICTED: cyclin-D-binding Myb-like transcr...   410   e-112
ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111
ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|XP_002529443.1| DNA binding protein, putative [Ricinus commu...   396   e-107

>ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like
            [Cucumis sativus]
          Length = 530

 Score =  417 bits (1071), Expect = e-114
 Identities = 191/342 (55%), Positives = 257/342 (75%)
 Frame = +3

Query: 627  KNINKGETRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVR 806
            + + +G    ++    +   E    + SSK+V+FSE VE+FPL+D  +  K  ++ GL+R
Sbjct: 189  EKVQEGGAGLRENEEISSSPERQSPKGSSKKVRFSEDVEIFPLVDDQNSGKTKEDDGLIR 248

Query: 807  GKRFSLEEDVIVKDAVFKFIKEHDLGDDGIEMVLRCMNYPETRNCWAEISTSMPWRTKES 986
            GKRFS EED IVK AVF++I++H LGD+G++MVL C  YPE ++CW +I  ++P+R   S
Sbjct: 249  GKRFSKEEDEIVKKAVFEYIEKHALGDEGLKMVLHCREYPEIKSCWKDIGKAIPYRPYLS 308

Query: 987  IYNRAHLLFESDGKYKWTPEDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLP 1166
            +Y RAH+LFE D K KWT E+ E ++K H  +G DW+ LAD LGK+R HVKD WRR+ LP
Sbjct: 309  VYYRAHILFERDEKRKWTHEEYELVRKFHDTHGSDWKGLADVLGKHRFHVKDTWRRIKLP 368

Query: 1167 NMKKGRWSQDEYQQLFDLVNMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACC 1346
            NMKKG+W+QDEYQ+LFDLVN DLR+K  EEK+SKHGMLRDNI WGAIS  LSTRS A CC
Sbjct: 369  NMKKGQWTQDEYQKLFDLVNKDLRLKAYEEKRSKHGMLRDNICWGAISDVLSTRSTALCC 428

Query: 1347 RKWYEQLESRLVREDKWASSDDIRLLDALLTMDFSSLEEVDWDSLLDHRPGDMCRKRWCR 1526
            +KWY QL S +V E++WA  DD RL+DAL ++D  S+E+V+WD LL+HR GD+CRKRW +
Sbjct: 429  QKWYRQLTSPMVAENEWADVDDYRLVDALSSLDACSIEDVEWDQLLEHRDGDVCRKRWSQ 488

Query: 1527 MVNHLGEHRNKSFADQVDVLSKRYCVDVLEARAAYEERTPVD 1652
            MV H+G++ NKSF++QV++LS+RY +DVL+AR AY+    VD
Sbjct: 489  MVKHIGDNGNKSFSEQVEILSQRYSIDVLDAREAYDNAPVVD 530


>ref|XP_004134338.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like
            [Cucumis sativus]
          Length = 537

 Score =  410 bits (1053), Expect = e-112
 Identities = 187/332 (56%), Positives = 252/332 (75%)
 Frame = +3

Query: 627  KNINKGETRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVR 806
            + + +G    ++    +   E    + SSK+V+FSE VE+FPL+D  +  K  ++ GL+R
Sbjct: 186  EKVQEGGAGLRENEEISSSPERQSPKGSSKKVRFSEDVEIFPLVDDQNSGKTKEDDGLIR 245

Query: 807  GKRFSLEEDVIVKDAVFKFIKEHDLGDDGIEMVLRCMNYPETRNCWAEISTSMPWRTKES 986
            GKRFS EED IVK AVF++I++H LGD+G++MVL C  YPE ++CW +I  ++P+R   S
Sbjct: 246  GKRFSKEEDEIVKKAVFEYIEKHALGDEGLKMVLHCREYPEIKSCWKDIGKAIPYRPYLS 305

Query: 987  IYNRAHLLFESDGKYKWTPEDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLP 1166
            +Y RAH+LFE D K KWT E+ E ++K H  +G DW+ LAD LGK+R HVKD WRR+ LP
Sbjct: 306  VYYRAHILFERDEKRKWTHEEYELVRKFHDTHGSDWKGLADVLGKHRFHVKDTWRRIKLP 365

Query: 1167 NMKKGRWSQDEYQQLFDLVNMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACC 1346
            NMKKG+W+QDEYQ+LFDLVN DLR+K  EEK+SKHGMLRDNI WGAIS  LSTRS A CC
Sbjct: 366  NMKKGQWTQDEYQKLFDLVNKDLRLKAYEEKRSKHGMLRDNICWGAISDVLSTRSTALCC 425

Query: 1347 RKWYEQLESRLVREDKWASSDDIRLLDALLTMDFSSLEEVDWDSLLDHRPGDMCRKRWCR 1526
            +KWY QL S +V E++WA  DD RL+DAL ++D  S+E+V+WD LL+HR GD+CRKRW +
Sbjct: 426  QKWYRQLTSPMVAENEWADVDDYRLVDALSSLDACSIEDVEWDQLLEHRDGDVCRKRWSQ 485

Query: 1527 MVNHLGEHRNKSFADQVDVLSKRYCVDVLEAR 1622
            MV H+G++ NKSF++QV++LS+RY +DVL+AR
Sbjct: 486  MVKHIGDNGNKSFSEQVEILSQRYSIDVLDAR 517


>ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|222869245|gb|EEF06376.1|
            predicted protein [Populus trichocarpa]
          Length = 538

 Score =  407 bits (1047), Expect = e-111
 Identities = 192/338 (56%), Positives = 243/338 (71%)
 Frame = +3

Query: 636  NKGETRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVRGKR 815
            +K  T+ +K   +   +E + ++ +SKRV F E VEVFP  D    EK   E GLVRGKR
Sbjct: 200  SKRVTQMEKDVETTGPSEKSSSKATSKRVSFCEDVEVFPSSDGPSDEKAVGEDGLVRGKR 259

Query: 816  FSLEEDVIVKDAVFKFIKEHDLGDDGIEMVLRCMNYPETRNCWAEISTSMPWRTKESIYN 995
            FS EED +VK+AV  +I  H LG +G+ MVL C  +P   +CW EI  ++PWR ++S+Y+
Sbjct: 260  FSHEEDEMVKEAVLNYIDVHGLGAEGLNMVLNCKKHPAIVHCWKEIGAALPWRPRQSVYH 319

Query: 996  RAHLLFESDGKYKWTPEDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLPNMK 1175
            RAH+LFE      WTPE+ E I+K H K+G DW+ LA+ LGK+R HVKD WRR+ L NMK
Sbjct: 320  RAHILFERGQNSSWTPEEYELIRKFHEKHGSDWKTLAEALGKHRFHVKDTWRRIKLINMK 379

Query: 1176 KGRWSQDEYQQLFDLVNMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACCRKW 1355
            KG+WSQDEYQ LFD VN+DLR+K   E+K+KHGMLRDNI+W AIS +L TR+ A CC+KW
Sbjct: 380  KGKWSQDEYQSLFDFVNLDLRLKAFVERKTKHGMLRDNISWTAISERLETRTDALCCQKW 439

Query: 1356 YEQLESRLVREDKWASSDDIRLLDALLTMDFSSLEEVDWDSLLDHRPGDMCRKRWCRMVN 1535
            Y+QL S +V E KW  +DD RLL  L  +D   +E+VDWD+LL+HR GD+CRKRW +MV 
Sbjct: 440  YDQLTSPMVAEGKWLDTDDYRLLMELYDLDACCMEDVDWDNLLEHRSGDLCRKRWNQMVK 499

Query: 1536 HLGEHRNKSFADQVDVLSKRYCVDVLEARAAYEERTPV 1649
            HLG+HRNKSFADQVDVL KRYC DVLEAR AY  +  V
Sbjct: 500  HLGDHRNKSFADQVDVLIKRYCPDVLEAREAYNSKPAV 537


>ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|222841208|gb|EEE78755.1|
            predicted protein [Populus trichocarpa]
          Length = 697

 Score =  405 bits (1041), Expect = e-110
 Identities = 190/334 (56%), Positives = 240/334 (71%)
 Frame = +3

Query: 648  TRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVRGKRFSLE 827
            T  ++   S   +E + ++ +SKRV F E VE+FP  D    +K   E G VRGKRFSLE
Sbjct: 363  TEMEEDAESTRPSEKSLSKVTSKRVSFCEDVEIFPSSDGPSDKKAVGEDGFVRGKRFSLE 422

Query: 828  EDVIVKDAVFKFIKEHDLGDDGIEMVLRCMNYPETRNCWAEISTSMPWRTKESIYNRAHL 1007
            ED +VK+AV  +I  H LG DG+ MVL C  +P  ++CW EI  ++PWR +ES+Y RAH+
Sbjct: 423  EDEMVKEAVLNYINVHGLGADGLNMVLNCKKHPAIKHCWKEIGAALPWRPRESVYYRAHI 482

Query: 1008 LFESDGKYKWTPEDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLPNMKKGRW 1187
            LFE D    WTPE+ + I+K H K+G DW+ LA+ LGK+R HVKD WRR+ L NMKKG+W
Sbjct: 483  LFERDQNSSWTPEEYDLIRKFHEKHGSDWKTLAEALGKHRFHVKDTWRRIKLINMKKGKW 542

Query: 1188 SQDEYQQLFDLVNMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACCRKWYEQL 1367
            SQDEYQ LFD VN+DLR+K   E+K+KHGMLRDNI+W AIS KL TR+ A CC+KWY+QL
Sbjct: 543  SQDEYQSLFDSVNLDLRLKAFVERKTKHGMLRDNISWTAISEKLETRTDALCCQKWYDQL 602

Query: 1368 ESRLVREDKWASSDDIRLLDALLTMDFSSLEEVDWDSLLDHRPGDMCRKRWCRMVNHLGE 1547
             S +V E KW  +DD RLL  L  +D   +E+VDWD+LL+HR G++CRKRW +MV HLG+
Sbjct: 603  TSPMVAEGKWLDTDDYRLLMELYDLDACCMEDVDWDNLLEHRSGELCRKRWNQMVKHLGD 662

Query: 1548 HRNKSFADQVDVLSKRYCVDVLEARAAYEERTPV 1649
            HRNKSFADQVDVL  RYC DVLEAR AY  +  V
Sbjct: 663  HRNKSFADQVDVLINRYCHDVLEAREAYNSKPAV 696


>ref|XP_002529443.1| DNA binding protein, putative [Ricinus communis]
            gi|223531120|gb|EEF32969.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 678

 Score =  396 bits (1017), Expect = e-107
 Identities = 191/345 (55%), Positives = 247/345 (71%), Gaps = 7/345 (2%)
 Frame = +3

Query: 639  KGETRRKKKTGSADGAENTET------RKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGL 800
            K   +RK+  G+ +  + T +      + +SK+V FSE+VEVFP  D    +   +E+ L
Sbjct: 334  KKSKKRKRVQGTVEDIDATNSIEKSTPKGTSKKVSFSEEVEVFPSSDGPSDDGTVQEEEL 393

Query: 801  VRGKRFSLEEDVIVKDAVFKFIKEHDLGDDGIEMVLRCMNYPETRNCWAEISTSMPWRTK 980
            VRGKRFS +ED +VK+AV K+IK H+LG+DG+EM+L C  YPE ++CW EI T++PWR  
Sbjct: 394  VRGKRFSRKEDEMVKEAVLKYIKNHELGEDGLEMILHCKKYPEIKSCWKEIGTALPWRPY 453

Query: 981  ESIYNRAHLLFESDGKYKWTPEDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMC 1160
            ES+Y RAH+LFE   K  WT ++ E ++K H K G DWR LAD LGK+R HVKDAWRR+ 
Sbjct: 454  ESVYYRAHILFERAEKRSWTEDEYEVVRKFHEKYGSDWRTLADALGKHRFHVKDAWRRIK 513

Query: 1161 LPNMKKGRWSQDEYQQLFDLVNMDLRMKISEE-KKSKHGMLRDNIAWGAISSKLSTRSFA 1337
            + N KKG+WSQ+EYQ LF+LVN+DLRMK  EE +KSKHGMLRDNI+W AIS KL +R+  
Sbjct: 514  VINRKKGKWSQEEYQTLFELVNVDLRMKAFEENRKSKHGMLRDNISWTAISEKLGSRTTP 573

Query: 1338 ACCRKWYEQLESRLVREDKWASSDDIRLLDALLTMDFSSLEEVDWDSLLDHRPGDMCRKR 1517
             CC KWY+QL S +V E KW   DD  L+ AL  +D   +E+VDWDSLL+HRPG++CRKR
Sbjct: 574  MCCIKWYDQLTSPMVAEGKWLDVDDYHLVMALYDLDACCMEDVDWDSLLEHRPGEVCRKR 633

Query: 1518 WCRMVNHLGEHRNKSFADQVDVLSKRYCVDVLEARAAYEERTPVD 1652
            W +MV HLGE+ N SFADQV  L +RYC DVLEAR AY  +  V+
Sbjct: 634  WNQMVKHLGENGNMSFADQVQALIERYCPDVLEARVAYYSKPIVN 678


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