BLASTX nr result

ID: Coptis24_contig00000663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000663
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308527.1| predicted protein [Populus trichocarpa] gi|2...   168   6e-44
ref|XP_004141053.1| PREDICTED: PCI domain-containing protein 2-l...   165   5e-42
ref|XP_002514103.1| PCI domain-containing protein, putative [Ric...   161   1e-41
ref|XP_002282302.1| PREDICTED: PCI domain-containing protein 2 [...   174   2e-41
ref|XP_003549244.1| PREDICTED: PCI domain-containing protein 2-l...   163   2e-41

>ref|XP_002308527.1| predicted protein [Populus trichocarpa] gi|222854503|gb|EEE92050.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  168 bits (426), Expect(2) = 6e-44
 Identities = 79/97 (81%), Positives = 89/97 (91%)
 Frame = -1

Query: 291 NLVDAYNSFEKASNAFLQEFRNWESGWAMEALYTVAYEIRVLAEMADRELNSMGKTPEKL 112
           NL+DAY++FEKA+NAFL EFRNWES WA+EALY +AYEIR+LAE ADREL S GK+PEKL
Sbjct: 89  NLLDAYHAFEKAANAFLPEFRNWESAWALEALYVIAYEIRILAERADRELASNGKSPEKL 148

Query: 111 KGAGSFLMKVFGALAGKGPKRIGALNVTCQLFKVYFK 1
           KGAGSFLMKVFG LAGKGPKR+GAL VTCQLFK+YFK
Sbjct: 149 KGAGSFLMKVFGVLAGKGPKRVGALYVTCQLFKIYFK 185



 Score = 35.0 bits (79), Expect(2) = 6e-44
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = -2

Query: 542 MGEAQRRIIISDYITRFTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFQDVNRLVK 363
           MGEA RRI  ++Y+ RF+D                              NVFQD NRL+K
Sbjct: 6   MGEAHRRI--TEYLNRFSDAVSFQDGASLKQLLSVSSDSPSLLSLADSLNVFQDANRLIK 63

Query: 362 ------QYGEILVP 339
                 Q+GEI+ P
Sbjct: 64  QSDKYSQFGEIIAP 77


>ref|XP_004141053.1| PREDICTED: PCI domain-containing protein 2-like [Cucumis sativus]
           gi|449488021|ref|XP_004157917.1| PREDICTED: PCI
           domain-containing protein 2-like [Cucumis sativus]
          Length = 413

 Score =  165 bits (417), Expect(2) = 5e-42
 Identities = 78/97 (80%), Positives = 87/97 (89%)
 Frame = -1

Query: 291 NLVDAYNSFEKASNAFLQEFRNWESGWAMEALYTVAYEIRVLAEMADRELNSMGKTPEKL 112
           NLVDAY +FEK SNAF QEFR+W+S WA+EALY VAYEIR++AE ADREL S GK+PEKL
Sbjct: 89  NLVDAYQAFEKFSNAFTQEFRSWDSAWALEALYVVAYEIRIIAERADRELASNGKSPEKL 148

Query: 111 KGAGSFLMKVFGALAGKGPKRIGALNVTCQLFKVYFK 1
           KGAGSFLMKVFG LAGKGPKR+GAL VTCQLFK+YFK
Sbjct: 149 KGAGSFLMKVFGVLAGKGPKRVGALYVTCQLFKIYFK 185



 Score = 32.0 bits (71), Expect(2) = 5e-42
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = -2

Query: 542 MGEAQRRIIISDYITRFTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFQDVNRLVK 363
           MGEA RRI  ++Y+ RF+D                              N+FQD NRL++
Sbjct: 6   MGEAHRRI--TEYLNRFSDSVSSQDGVSLKSLLALSSNSPNLLALADSLNIFQDANRLIR 63

Query: 362 ------QYGEILV 342
                 Q+GE+LV
Sbjct: 64  QSDRYSQFGEMLV 76


>ref|XP_002514103.1| PCI domain-containing protein, putative [Ricinus communis]
           gi|223546559|gb|EEF48057.1| PCI domain-containing
           protein, putative [Ricinus communis]
          Length = 412

 Score =  161 bits (408), Expect(2) = 1e-41
 Identities = 77/97 (79%), Positives = 87/97 (89%)
 Frame = -1

Query: 291 NLVDAYNSFEKASNAFLQEFRNWESGWAMEALYTVAYEIRVLAEMADRELNSMGKTPEKL 112
           NLVDAY +FEKA+NAF+QEFRNWES WA++ALY VAYEIRVLAE AD++L S GK+PEKL
Sbjct: 88  NLVDAYPAFEKAANAFIQEFRNWESAWALDALYVVAYEIRVLAEKADQDLASNGKSPEKL 147

Query: 111 KGAGSFLMKVFGALAGKGPKRIGALNVTCQLFKVYFK 1
           K AGSFLMKVFG LAGKG KR+GAL VTCQLFK+YFK
Sbjct: 148 KAAGSFLMKVFGVLAGKGSKRVGALYVTCQLFKIYFK 184



 Score = 34.3 bits (77), Expect(2) = 1e-41
 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = -2

Query: 542 MGEAQRRIIISDYITRFTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFQDVNRLVK 363
           MGEA RRI  +DY+ RF+D                              N+FQD NRL+K
Sbjct: 5   MGEAHRRI--TDYLNRFSDAVYSQDGASLKQLLSLSSNSSSILSLADALNIFQDANRLIK 62

Query: 362 ------QYGEILVP 339
                 Q+GEI  P
Sbjct: 63  QSEKYSQFGEITSP 76


>ref|XP_002282302.1| PREDICTED: PCI domain-containing protein 2 [Vitis vinifera]
           gi|297738675|emb|CBI27920.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score =  174 bits (440), Expect = 2e-41
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = -1

Query: 291 NLVDAYNSFEKASNAFLQEFRNWESGWAMEALYTVAYEIRVLAEMADRELNSMGKTPEKL 112
           NL+D+YN+FEKA+NAF+QEFRNWES WA+EALY +AYEIRVLAE ADREL S+GKTPEKL
Sbjct: 89  NLLDSYNAFEKAANAFIQEFRNWESAWALEALYVIAYEIRVLAERADRELASVGKTPEKL 148

Query: 111 KGAGSFLMKVFGALAGKGPKRIGALNVTCQLFKVYFK 1
           KGAGSFLMKVFG LAGKGPKR+GAL VTCQLFK+YFK
Sbjct: 149 KGAGSFLMKVFGVLAGKGPKRVGALYVTCQLFKIYFK 185


>ref|XP_003549244.1| PREDICTED: PCI domain-containing protein 2-like [Glycine max]
          Length = 413

 Score =  163 bits (412), Expect(2) = 2e-41
 Identities = 76/99 (76%), Positives = 88/99 (88%)
 Frame = -1

Query: 297 RNNLVDAYNSFEKASNAFLQEFRNWESGWAMEALYTVAYEIRVLAEMADRELNSMGKTPE 118
           +NNL++AYN+FEK +NAF+QEFRNWES WAMEALY + Y+IRVLAE AD+EL S GK+PE
Sbjct: 87  QNNLLEAYNAFEKTANAFIQEFRNWESAWAMEALYVIVYDIRVLAEKADKELVSNGKSPE 146

Query: 117 KLKGAGSFLMKVFGALAGKGPKRIGALNVTCQLFKVYFK 1
           KLKGAGS LMKVFG LAGKG KR+GAL VTCQLFK+YFK
Sbjct: 147 KLKGAGSVLMKVFGTLAGKGSKRVGALYVTCQLFKIYFK 185



 Score = 32.0 bits (71), Expect(2) = 2e-41
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = -2

Query: 542 MGEAQRRIIISDYITRFTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFQDVNRLVK 363
           MGEA RRI  ++Y+ RF+D                              N+FQD NRL+K
Sbjct: 6   MGEAHRRI--TEYLNRFSDAISCQDGATFKSLFALSSNSPFLLSLGDALNLFQDANRLIK 63

Query: 362 ------QYGEILVP 339
                 Q+ +ILVP
Sbjct: 64  QSDNHSQFTDILVP 77


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