BLASTX nr result
ID: Coptis24_contig00000660
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000660
(1714 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 166 2e-38
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo... 166 2e-38
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 166 2e-38
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi... 165 4e-38
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi... 164 7e-38
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 166 bits (420), Expect = 2e-38
Identities = 141/580 (24%), Positives = 252/580 (43%), Gaps = 21/580 (3%)
Frame = -2
Query: 1713 YKLPCKITDKVDQICRNFWWNGTDTSNSYHTLSWERLCKSKDTGGLGFRSSRDMNKALIS 1534
++L + D++ ++ +WW+ + N H LSW +L K+ GGLGFR N A+++
Sbjct: 1064 FELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLA 1123
Query: 1533 KHCWRLIKDELSKWSQLLKSIYPNWWNMTEMKVLPKGTSYFFRGIVRTMKDFKEGYLWRI 1354
K WRLI+D S S++L++ Y + K SY +R I + ++ + G +WR+
Sbjct: 1124 KQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPK-QTSNVSYTWRSIQKGLRVLQNGMIWRV 1182
Query: 1353 GNGSKVSIYHDPWLTH--LSKPILLKDYLEPNPSIAGLTVSHLINPLSHSWNQNRLGELF 1180
G+GSK++I+ DPW+ KP + P + V LI+P + +W+++ L + F
Sbjct: 1183 GDGSKINIWADPWIPRGWSRKP------MTPRGANLVTKVEELIDPYTGTWDEDLLSQTF 1236
Query: 1179 PGPXXXXXXXXXXXXXXITDQIIWPASKNGKLSVKTAYRFLTKQDELVTNS--------- 1027
+ D + W G +VK+AY+ + + + +
Sbjct: 1237 -WEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWE 1295
Query: 1026 SFNPXXXXXXXXXXVAANTQLFLWKLYMGGLPSGDILDKHKFKGDVSCILCNKAIETAEH 847
S + V + FLW++ L L D C++C + E A H
Sbjct: 1296 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGH 1355
Query: 846 LFFKCEWTKRVWYVSESMIHVDLHSDWSVREWLQEFIGWSESTEEYLR--RRGIYSLLLL 673
LFFKC+ K+VW ++L S+ E Q+ G + Y R +++ L
Sbjct: 1356 LFFKCKPVKKVWQA------LNLEELRSMLE--QQTSGKNVLQSIYCRPENERTSAIVCL 1407
Query: 672 YQIWESRNKAKMEHHEPKVNRMLHNTILRSTKCEVAYARLNSDINNSQLLGSLNEETRIR 493
+Q W+ RN+ + E P+ L + I+ + R+N + + E +
Sbjct: 1408 WQWWKERNEVR-EGGIPRSPAELSHLIMSQAG---EFVRMNVKEKSPR-----TGECAVW 1458
Query: 492 IPPSPPWYKLNFDGAFDKNTGRGAAGAICRSGDGSI-QGTAYKRFLAEDAEQAEYIGAEI 316
P + K+N DGA+ N +G G + + G++ Q A +DA AE +
Sbjct: 1459 RRPPLNFVKINTDGAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAA 1518
Query: 315 AAMLAIQMGLQHVIFEGDCRSVMLVLADNSAADVGWKVSS---IVYHIKTLVAG-ISEFK 148
A A + G+ + E D + + DNS + +SS ++ IK ++ F
Sbjct: 1519 AIKTASERGMSRIELETDSMMLRYAIQDNS-----FNLSSLGGVILEIKHIILSCFHSFS 1573
Query: 147 FCWIRRTGNRLAHEIASWAIK---GASWTQLPHSISNSVT 37
+ R+ N++AHE+A++ +SW P + V+
Sbjct: 1574 VSYSPRSCNKVAHELAAYGCNLQTVSSWAGCPPGLERLVS 1613
>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
Length = 639
Score = 166 bits (420), Expect = 2e-38
Identities = 142/580 (24%), Positives = 252/580 (43%), Gaps = 21/580 (3%)
Frame = -2
Query: 1713 YKLPCKITDKVDQICRNFWWNGTDTSNSYHTLSWERLCKSKDTGGLGFRSSRDMNKALIS 1534
++L + D++ ++ +WW+ + N H LSW +L K+ GGLGFR N A+++
Sbjct: 4 FELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLA 63
Query: 1533 KHCWRLIKDELSKWSQLLKSIYPNWWNMTEMKVLPKGTSYFFRGIVRTMKDFKEGYLWRI 1354
K WRLI+D S S++L++ Y + K SY +R I + ++ + G +WR+
Sbjct: 64 KQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPK-QTSNVSYTWRSIQKGLRVLQNGMIWRM 122
Query: 1353 GNGSKVSIYHDPWLTH--LSKPILLKDYLEPNPSIAGLTVSHLINPLSHSWNQNRLGELF 1180
G+GSK++I+ DPW+ KP + P + V LI+P + +W+++ L + F
Sbjct: 123 GDGSKINIWADPWIPRGWSRKP------MTPRGANLVTKVEELIDPYTGTWDEDLLSQTF 176
Query: 1179 PGPXXXXXXXXXXXXXXITDQIIWPASKNGKLSVKTAYRFLTKQDELVTNS--------- 1027
+ D + W G +VK+AY+ + + + +
Sbjct: 177 -WEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWE 235
Query: 1026 SFNPXXXXXXXXXXVAANTQLFLWKLYMGGLPSGDILDKHKFKGDVSCILCNKAIETAEH 847
S + V + FLW++ L L D C++C + E A H
Sbjct: 236 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGH 295
Query: 846 LFFKCEWTKRVWYVSESMIHVDLHSDWSVREWLQEFIGWSESTEEYLRR--RGIYSLLLL 673
LFFKC+ K+VW ++L S+ E Q+ G + Y R +++ L
Sbjct: 296 LFFKCKPVKKVWQA------LNLEELRSMLE--QQTSGKNVLQSIYCRPEIERTSAIVCL 347
Query: 672 YQIWESRNKAKMEHHEPKVNRMLHNTILRSTKCEVAYARLNSDINNSQLLGSLNEETRIR 493
+Q W+ RN+ + E P+ L + I+ + R+N + + E +
Sbjct: 348 WQWWKERNEVR-EGGIPRSPAELSHLIMSQAG---EFVRMNVKEKSPR-----TGECAVW 398
Query: 492 IPPSPPWYKLNFDGAFDKNTGRGAAGAICRSGDGSI-QGTAYKRFLAEDAEQAEYIGAEI 316
P + K+N DGA+ N +G G + R G++ Q A +DA AE +
Sbjct: 399 RRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAA 458
Query: 315 AAMLAIQMGLQHVIFEGDCRSVMLVLADNSAADVGWKVSS---IVYHIKTLVAG-ISEFK 148
A A + G+ + E D + + DNS + +SS ++ IK ++ F
Sbjct: 459 AIKTASERGMSRIELETDSMMLRYAIQDNS-----FNLSSLGGVILEIKHIILSCFHSFS 513
Query: 147 FCWIRRTGNRLAHEIASWAIK---GASWTQLPHSISNSVT 37
+ R+ N++AHE+A++ +SW P + V+
Sbjct: 514 VSYSPRSCNKVAHELAAYGCNLQTVSSWAGCPPGLERLVS 553
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 166 bits (420), Expect = 2e-38
Identities = 142/580 (24%), Positives = 252/580 (43%), Gaps = 21/580 (3%)
Frame = -2
Query: 1713 YKLPCKITDKVDQICRNFWWNGTDTSNSYHTLSWERLCKSKDTGGLGFRSSRDMNKALIS 1534
++L + D++ ++ +WW+ + N H LSW +L K+ GGLGFR N A+++
Sbjct: 1037 FELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLA 1096
Query: 1533 KHCWRLIKDELSKWSQLLKSIYPNWWNMTEMKVLPKGTSYFFRGIVRTMKDFKEGYLWRI 1354
K WRLI+D S S++L++ Y + K SY +R I + ++ + G +WR+
Sbjct: 1097 KQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPK-QTSNVSYTWRSIQKGLRVLQNGMIWRM 1155
Query: 1353 GNGSKVSIYHDPWLTH--LSKPILLKDYLEPNPSIAGLTVSHLINPLSHSWNQNRLGELF 1180
G+GSK++I+ DPW+ KP + P + V LI+P + +W+++ L + F
Sbjct: 1156 GDGSKINIWADPWIPRGWSRKP------MTPRGANLVTKVEELIDPYTGTWDEDLLSQTF 1209
Query: 1179 PGPXXXXXXXXXXXXXXITDQIIWPASKNGKLSVKTAYRFLTKQDELVTNS--------- 1027
+ D + W G +VK+AY+ + + + +
Sbjct: 1210 -WEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWE 1268
Query: 1026 SFNPXXXXXXXXXXVAANTQLFLWKLYMGGLPSGDILDKHKFKGDVSCILCNKAIETAEH 847
S + V + FLW++ L L D C++C + E A H
Sbjct: 1269 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGH 1328
Query: 846 LFFKCEWTKRVWYVSESMIHVDLHSDWSVREWLQEFIGWSESTEEYLRR--RGIYSLLLL 673
LFFKC+ K+VW ++L S+ E Q+ G + Y R +++ L
Sbjct: 1329 LFFKCKPVKKVWQA------LNLEELRSMLE--QQTSGKNVLQSIYCRPEIERTSAIVCL 1380
Query: 672 YQIWESRNKAKMEHHEPKVNRMLHNTILRSTKCEVAYARLNSDINNSQLLGSLNEETRIR 493
+Q W+ RN+ + E P+ L + I+ + R+N + + E +
Sbjct: 1381 WQWWKERNEVR-EGGIPRSPAELSHLIMSQAG---EFVRMNVKEKSPR-----TGECAVW 1431
Query: 492 IPPSPPWYKLNFDGAFDKNTGRGAAGAICRSGDGSI-QGTAYKRFLAEDAEQAEYIGAEI 316
P + K+N DGA+ N +G G + R G++ Q A +DA AE +
Sbjct: 1432 RRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAA 1491
Query: 315 AAMLAIQMGLQHVIFEGDCRSVMLVLADNSAADVGWKVSS---IVYHIKTLVAG-ISEFK 148
A A + G+ + E D + + DNS + +SS ++ IK ++ F
Sbjct: 1492 AIKTASERGMSRIELETDSMMLRYAIQDNS-----FNLSSLGGVILEIKHIILSCFHSFS 1546
Query: 147 FCWIRRTGNRLAHEIASWAIK---GASWTQLPHSISNSVT 37
+ R+ N++AHE+A++ +SW P + V+
Sbjct: 1547 VSYSPRSCNKVAHELAAYGCNLQTVSSWAGCPPGLERLVS 1586
>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
Length = 561
Score = 165 bits (417), Expect = 4e-38
Identities = 139/579 (24%), Positives = 250/579 (43%), Gaps = 20/579 (3%)
Frame = -2
Query: 1713 YKLPCKITDKVDQICRNFWWNGTDTSNSYHTLSWERLCKSKDTGGLGFRSSRDMNKALIS 1534
++L + D++ ++ +WW+ + N H LSW +L K+ GGLGFR N A+++
Sbjct: 4 FELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLA 63
Query: 1533 KHCWRLIKDELSKWSQLLKSIYPNWWNMTEMKVLPKGTSYFFRGIVRTMKDFKEGYLWRI 1354
K WRLI+D S S++L++ Y + K SY +R I + ++ + G +WR+
Sbjct: 64 KQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPK-QTSNVSYTWRSIQKGLRVLQNGMIWRM 122
Query: 1353 GNGSKVSIYHDPWLTH--LSKPILLKDYLEPNPSIAGLTVSHLINPLSHSWNQNRLGELF 1180
G+GSK++I+ DPW+ KP + P + V LI+P + +W+++ L + F
Sbjct: 123 GDGSKINIWADPWIPRGWSRKP------MTPRGANLVTKVEELIDPYTGTWDEDLLSQTF 176
Query: 1179 PGPXXXXXXXXXXXXXXITDQIIWPASKNGKLSVKTAYRFLTKQDELVTNS--------- 1027
+ D + W G +VK+AY+ + + + +
Sbjct: 177 -WEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWE 235
Query: 1026 SFNPXXXXXXXXXXVAANTQLFLWKLYMGGLPSGDILDKHKFKGDVSCILCNKAIETAEH 847
S + V + FLW++ L L D C++C + E A H
Sbjct: 236 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGH 295
Query: 846 LFFKCEWTKRVWY-VSESMIHVDLHSDWSVREWLQEFIGWSESTEEYLRRRGIYSLLLLY 670
LFFKC+ K+VW ++ + L S + LQ E+ +++ L+
Sbjct: 296 LFFKCKPVKKVWQALNLEELRSMLKQQTSGKNVLQSIYCRPENER-------TSAIVCLW 348
Query: 669 QIWESRNKAKMEHHEPKVNRMLHNTILRSTKCEVAYARLNSDINNSQLLGSLNEETRIRI 490
Q W+ RN+ + E P+ L + I+ + R+N + + E +
Sbjct: 349 QWWKERNEVR-EGGIPRSPAELSHLIMSQAG---EFVRMNVKEKSPR-----TGECAVWR 399
Query: 489 PPSPPWYKLNFDGAFDKNTGRGAAGAICRSGDGSI-QGTAYKRFLAEDAEQAEYIGAEIA 313
P + K+N DGA+ N +G G + + G++ Q A +DA AE + A
Sbjct: 400 RPPLNFVKINTDGAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAA 459
Query: 312 AMLAIQMGLQHVIFEGDCRSVMLVLADNSAADVGWKVSS---IVYHIKTLVAG-ISEFKF 145
A + G+ + E D + + DNS + +SS ++ IK ++ F
Sbjct: 460 IKTASERGMSRIELETDSMMLRYAIQDNS-----FNLSSLGGVILEIKHIILSCFHSFSV 514
Query: 144 CWIRRTGNRLAHEIASWAIK---GASWTQLPHSISNSVT 37
+ R+ N++AHE+A++ +SW P + V+
Sbjct: 515 SYSPRSCNKVAHELAAYGCNLQTVSSWAGCPPGLERLVS 553
>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 164 bits (415), Expect = 7e-38
Identities = 131/564 (23%), Positives = 239/564 (42%), Gaps = 25/564 (4%)
Frame = -2
Query: 1713 YKLPCKITDKVDQICRNFWWNGTDTSNSYHTLSWERLCKSKDTGGLGFRSSRDMNKALIS 1534
+KLP + + + + RNFWW D H +W+ L K K GG+GFR R N+AL++
Sbjct: 730 FKLPDSVCEDLSKAVRNFWWGAGDGKRRTHWRAWDSLTKPKQCGGMGFRDFRLFNQALLA 789
Query: 1533 KHCWRLIKDELSKWSQLLKSIYPNWWNMTEMKVLPKGTSYFFRGIVRTMKDFKEGYLWRI 1354
+ WR+++ S +++LK+ Y ++ + S +RGI ++ K+G +WR+
Sbjct: 790 RQSWRILEFPESLCARVLKAKYFPNGSLIDTS-FSGNASPGWRGIEYGLELLKQGIIWRV 848
Query: 1353 GNGSKVSIYHDPWLTH--LSKPILLKDYLEPNPSIAGLTVSHLINPLSHSWNQNRLGELF 1180
GNG + I+ DPW+ +PI K VS L++ + W+ +++ ++F
Sbjct: 849 GNGRTIRIWRDPWIPRDFSRRPITHKGTSRVK------WVSELLDQ-NGEWDSHKIQQIF 901
Query: 1179 PGPXXXXXXXXXXXXXXITDQIIWPASKNGKLSVKTAYRFLTKQDELVTNSSFNPXXXXX 1000
D + W + K G+ SV++AY +V +SS +
Sbjct: 902 LPIDVEKILSIHTSRFHENDFVAWHSDKLGRFSVRSAYHLALSLSNVVASSSSSGQELSK 961
Query: 999 XXXXXVAAN----TQLFLWKLYMGGLPSGDILDKHKFKGDVSCILCNKAIETAEHLFFKC 832
+ + ++F+W+ L + K + + C +C E H +C
Sbjct: 962 AWNQLWSCHVPQKVRIFIWRAASNSLATMVNKKKKRLEHCSMCSICGTEEEDVAHALCRC 1021
Query: 831 EWTKRVWYVSE--SMIHVDLHSDWSVREWLQEFIGWSESTEEYLRRRGIYSLLLLYQIWE 658
K +W V I V +W+ +W+ + +E + L++L++IW
Sbjct: 1022 PHAKYLWEVMRRAKAITVQADRNWTGADWIFDI------SERISKEERPTLLMMLWRIWY 1075
Query: 657 SRNKAKMEHHEPKVNRMLHNTILRSTKCEVAYARLNSDIN--------NSQLLGSLNEET 502
RN ++ H + V + + S + R D N G+
Sbjct: 1076 VRN--EITHGKAAVPAEVSQRFISSYITSLLEIRQFPDANLCKGKHVIRCAAAGAQVNHP 1133
Query: 501 RIR------IPPSPPWYKLNFDGAFDKNTGRGAAGAICRSGDGSIQGTAYKRFLAE-DAE 343
R+ + P W KLN DG++D G G GA+ R+ +G + A A
Sbjct: 1134 RVNSVPVRWVRPQAGWMKLNVDGSYDPRDGSGGIGAVLRNSEGKLIFAACGSMCRPVSAL 1193
Query: 342 QAEYIGAEIAAMLAIQMGLQHVIFEGDCRSVMLVLADNS--AADVGWKVSSIVYHIKTLV 169
+AE + + +LA+Q +I E DC ++ ++A+ +D+G+ ++ IK LV
Sbjct: 1194 EAELVACKEGIILALQWTFLPIIVETDCLELVKLVAEQGKVMSDLGF----LIREIKDLV 1249
Query: 168 AGISEFKFCWIRRTGNRLAHEIAS 97
G E + R+ + H +A+
Sbjct: 1250 KGNREIVINKVTRSQSIGCHFLAN 1273