BLASTX nr result

ID: Coptis24_contig00000657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000657
         (1548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27136.3| unnamed protein product [Vitis vinifera]              269   2e-69
ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262...   265   2e-68
ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779...   239   1e-60
ref|XP_002527136.1| nucleic acid binding protein, putative [Rici...   238   4e-60
ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786...   236   9e-60

>emb|CBI27136.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  269 bits (687), Expect = 2e-69
 Identities = 156/303 (51%), Positives = 202/303 (66%), Gaps = 6/303 (1%)
 Frame = -2

Query: 1358 PQPKKLKVPATVSGNATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLSKKPSEVTKXX 1179
            PQ KKLKVPA+V  NA                               Q+SKK S   +  
Sbjct: 332  PQKKKLKVPASVPSNA----GKSSSSEEESSDSEDEPSKIPLPKKATQVSKKSSG-PEED 386

Query: 1178 XXXXXXXXXXXXXEQPAKTLKKNDTDVEMKDAQSP--KTNNKQAKLDNKTPATPQVPSNV 1005
                         E+P+KT KKN TDVEM DA++P  +T++K  K   KTPATPQV S  
Sbjct: 387  SSEEDSSEEESDEEEPSKTPKKNGTDVEMVDAETPAKQTDSKSGKKAPKTPATPQVESTG 446

Query: 1004 TNTLFVGNLPFSAQKEDVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAME 825
            + TLFVGNL FS QKEDVE FFKDAGEVVDVRF+ + +GR KG+ H EFA+ E AQKA++
Sbjct: 447  SKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALK 506

Query: 824  LNGQELYGRELRLDYSKPRGSFNTPQSGK-TNSYQKGG-QSFTVFVRGFDTSGKPHEVES 651
            +NG++L GR +RLD ++ RG++ TP SGK +NS+QKGG Q+ T+FVRGFD SG   +V S
Sbjct: 507  MNGKDLLGRAVRLDLARERGAY-TPYSGKESNSFQKGGSQAQTIFVRGFDKSGDEDQVRS 565

Query: 650  TLQEHFASCGEISRVSLPKDYESGALKGFAYVEFADRASLSKAVELDGS--GDYPLSVEE 477
            TL+E+F SCG+ISR+S+PKDYESG++KG AY++F D  S +KA+EL+G+  G Y L+VEE
Sbjct: 566  TLEEYFGSCGDISRISIPKDYESGSVKGIAYMDFTDGDSFNKALELNGTELGGYTLNVEE 625

Query: 476  ARP 468
            A+P
Sbjct: 626  AKP 628


>ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
          Length = 664

 Score =  265 bits (677), Expect = 2e-68
 Identities = 138/229 (60%), Positives = 181/229 (79%), Gaps = 6/229 (2%)
 Frame = -2

Query: 1136 QPAKTLKKNDTDVEMKDAQSP--KTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPFSAQ 963
            +P+KT KKN TDVEM DA++P  +T++K  K   KTPATPQV S  + TLFVGNL FS Q
Sbjct: 355  EPSKTPKKNGTDVEMVDAETPAKQTDSKSGKKAPKTPATPQVESTGSKTLFVGNLSFSVQ 414

Query: 962  KEDVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGRELRLD 783
            KEDVE FFKDAGEVVDVRF+ + +GR KG+ H EFA+ E AQKA+++NG++L GR +RLD
Sbjct: 415  KEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALKMNGKDLLGRAVRLD 474

Query: 782  YSKPRGSFNTPQSGK-TNSYQKGG-QSFTVFVRGFDTSGKPHEVESTLQEHFASCGEISR 609
             ++ RG++ TP SGK +NS+QKGG Q+ T+FVRGFD SG   +V STL+E+F SCG+ISR
Sbjct: 475  LARERGAY-TPYSGKESNSFQKGGSQAQTIFVRGFDKSGDEDQVRSTLEEYFGSCGDISR 533

Query: 608  VSLPKDYESGALKGFAYVEFADRASLSKAVELDGS--GDYPLSVEEARP 468
            +S+PKDYESG++KG AY++F D  S +KA+EL+G+  G Y L+VEEA+P
Sbjct: 534  ISIPKDYESGSVKGIAYMDFTDGDSFNKALELNGTELGGYTLNVEEAKP 582


>ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
          Length = 744

 Score =  239 bits (610), Expect = 1e-60
 Identities = 127/227 (55%), Positives = 161/227 (70%), Gaps = 4/227 (1%)
 Frame = -2

Query: 1136 QPAKTLKKNDTDVEMKDAQSPKTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPFSAQKE 957
            +P+KT +K D DVEM DA S        K   KTP TP+  +  + TLFVGNLPFS ++ 
Sbjct: 435  EPSKTPQKRDRDVEMVDAAS------SGKKAPKTPVTPKEETGASKTLFVGNLPFSVERA 488

Query: 956  DVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGRELRLDYS 777
            DVE FFKDAGEVVDVRF  ++ G+ KG+ H EFA+   AQKA+ LNGQ+L+ RELRLD +
Sbjct: 489  DVEDFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAAAAQKALGLNGQQLFNRELRLDLA 548

Query: 776  KPRGSFNTPQSGKTNSYQKG--GQSFTVFVRGFDTSGKPHEVESTLQEHFASCGEISRVS 603
            + RG++    S   NS QK   GQS TVFVRGFDTS    E+  +LQEHF SCG+I+RVS
Sbjct: 549  RERGAYTPNSSNWNNSSQKSGRGQSQTVFVRGFDTSLGEDEIRGSLQEHFGSCGDITRVS 608

Query: 602  LPKDYESGALKGFAYVEFADRASLSKAVELDGS--GDYPLSVEEARP 468
            +PKDYESGA+KGFAYV+F+D  S+ KA+EL  +  G Y L+V+EA+P
Sbjct: 609  IPKDYESGAVKGFAYVDFSDVDSMGKALELHETELGGYTLTVDEAKP 655


>ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533496|gb|EEF35238.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 642

 Score =  238 bits (606), Expect = 4e-60
 Identities = 140/298 (46%), Positives = 177/298 (59%), Gaps = 8/298 (2%)
 Frame = -2

Query: 1136 QPAKTLKKNDTDVEMKDAQSPKTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPFSAQKE 957
            +P+KT KK DTDV+M DA    T  K      KTP TPQV S  + TLFVGNLPF  ++ 
Sbjct: 347  KPSKTPKKKDTDVKMVDATPQATTKKP-----KTPVTPQVQSTGSKTLFVGNLPFQVERA 401

Query: 956  DVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGRELRLDYS 777
            DVE FFK AGEVVDVRF L+++ R KG+ H EFA+ E A +A++LNGQ L GRE+RLD +
Sbjct: 402  DVEDFFKGAGEVVDVRFALDQDQRFKGFGHVEFATIEAAHEALKLNGQSLNGREVRLDLA 461

Query: 776  KPRG--SFNTPQSGKTNSYQKGGQSFT--VFVRGFDTSGKPHEVESTLQEHFASCGEISR 609
            + RG  +  TP SGK NS+QKGG+S T  +FVRGFD      E+ ++L EHF +CGEI+R
Sbjct: 462  RERGERAPYTPYSGKDNSFQKGGRSQTQKIFVRGFDKFLGEDEIRNSLGEHFKTCGEITR 521

Query: 608  VSLPKDYESGALKGFAYVEFADRASLSKAVELDGS--GDYPLSVEEARPXXXXXXXXXXX 435
            +SLP DYE+GA+KG AYVEF D    +KA+E +GS  GD  L+VEEA+P           
Sbjct: 522  ISLPTDYETGAIKGMAYVEFQDATGFNKALEFNGSQLGDQYLTVEEAKPPRNDNNRDGWG 581

Query: 434  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSN--SKPSFTASGKKTTFDD 267
                                                      ++PS TASGKKTTF+D
Sbjct: 582  SGGRGGGRSGGGRSGGRDGGGRFGGRGGGGRGGGRGRGRGGPNRPSMTASGKKTTFND 639


>ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786132 [Glycine max]
          Length = 748

 Score =  236 bits (603), Expect = 9e-60
 Identities = 126/227 (55%), Positives = 161/227 (70%), Gaps = 4/227 (1%)
 Frame = -2

Query: 1136 QPAKTLKKNDTDVEMKDAQSPKTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPFSAQKE 957
            +P+KT +K   DVEM DA     + K+A    KTP TP+  S  + TLFVGNLPFS ++ 
Sbjct: 440  KPSKTPQKRGRDVEMVDAA---LSEKKAP---KTPVTPREESGTSKTLFVGNLPFSVERA 493

Query: 956  DVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGRELRLDYS 777
            DVE FFKDAGEVVDVRF  ++ G+ KG+ H EFA+ E AQ A+ LNGQ+L+ RELRLD +
Sbjct: 494  DVEGFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAEAAQNALGLNGQQLFNRELRLDLA 553

Query: 776  KPRGSFNTPQSGKTNSYQKG--GQSFTVFVRGFDTSGKPHEVESTLQEHFASCGEISRVS 603
            + RG++    S   NS QK   GQS T+FVRGFDTS    E+  +LQEHF SCG+I+RVS
Sbjct: 554  RERGAYTPNSSNWNNSSQKSERGQSQTIFVRGFDTSLGEDEIRGSLQEHFGSCGDITRVS 613

Query: 602  LPKDYESGALKGFAYVEFADRASLSKAVELDGS--GDYPLSVEEARP 468
            +PKDYESGA+KGFAYV+F D  S+ KA+EL  +  G Y L+V+EA+P
Sbjct: 614  IPKDYESGAVKGFAYVDFGDADSMGKALELHETELGGYTLTVDEAKP 660


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