BLASTX nr result

ID: Coptis24_contig00000647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000647
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273436.2| PREDICTED: patatin-like phospholipase domain...   272   2e-71
emb|CAN73749.1| hypothetical protein VITISV_021352 [Vitis vinifera]   270   7e-71
ref|XP_002528608.1| conserved hypothetical protein [Ricinus comm...   268   3e-70
ref|XP_002298181.1| predicted protein [Populus trichocarpa] gi|2...   268   4e-70
gb|ABK95138.1| unknown [Populus trichocarpa]                          268   4e-70

>ref|XP_002273436.2| PREDICTED: patatin-like phospholipase domain-containing protein
           4-like [Vitis vinifera] gi|298204588|emb|CBI23863.3|
           unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  272 bits (695), Expect = 2e-71
 Identities = 128/143 (89%), Positives = 139/143 (97%)
 Frame = +3

Query: 3   SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRVCIDG 182
           SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNR+CIDG
Sbjct: 225 SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRLCIDG 284

Query: 183 GVTLFMPPTSASKTVRVCAFPAERLGLEGIGISPDCNPENRASARELFNWALEPAEDHVL 362
           G+TLFMPPTSAS+TVRVCAFPA RLGL+GIGISPDCNPENRA+ REL NWALEPAED++L
Sbjct: 285 GLTLFMPPTSASQTVRVCAFPAGRLGLDGIGISPDCNPENRATPRELLNWALEPAEDYIL 344

Query: 363 DRLFELGYLDASVWADQNPVEEI 431
           DRLFELGYLDA+VWA+ NP+EE+
Sbjct: 345 DRLFELGYLDAAVWAEDNPIEEL 367


>emb|CAN73749.1| hypothetical protein VITISV_021352 [Vitis vinifera]
          Length = 401

 Score =  270 bits (691), Expect = 7e-71
 Identities = 128/142 (90%), Positives = 138/142 (97%)
 Frame = +3

Query: 3   SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRVCIDG 182
           SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNR+CIDG
Sbjct: 225 SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRLCIDG 284

Query: 183 GVTLFMPPTSASKTVRVCAFPAERLGLEGIGISPDCNPENRASARELFNWALEPAEDHVL 362
           G+TLFMPPTSAS+TVRVCAFPA RLGL+GIGISPDCNPENRA+ REL NWALEPAED++L
Sbjct: 285 GLTLFMPPTSASQTVRVCAFPAGRLGLDGIGISPDCNPENRATPRELLNWALEPAEDYIL 344

Query: 363 DRLFELGYLDASVWADQNPVEE 428
           DRLFELGYLDA+VWA+ NPVE+
Sbjct: 345 DRLFELGYLDAAVWAEDNPVED 366


>ref|XP_002528608.1| conserved hypothetical protein [Ricinus communis]
           gi|223531953|gb|EEF33766.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score =  268 bits (685), Expect = 3e-70
 Identities = 124/143 (86%), Positives = 139/143 (97%)
 Frame = +3

Query: 3   SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRVCIDG 182
           SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPAT+FRNR+CIDG
Sbjct: 250 SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATMFRNRLCIDG 309

Query: 183 GVTLFMPPTSASKTVRVCAFPAERLGLEGIGISPDCNPENRASARELFNWALEPAEDHVL 362
           G+TLFMPPTSA++T+RVCAFPA RLGL+GIGISPDCNPENRAS RELFNWALEPAED +L
Sbjct: 310 GLTLFMPPTSAAQTIRVCAFPASRLGLQGIGISPDCNPENRASPRELFNWALEPAEDDIL 369

Query: 363 DRLFELGYLDASVWADQNPVEEI 431
           DRLF+LGY DA+VWA++NPV+++
Sbjct: 370 DRLFQLGYSDAAVWAEENPVDKV 392


>ref|XP_002298181.1| predicted protein [Populus trichocarpa] gi|222845439|gb|EEE82986.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  268 bits (684), Expect = 4e-70
 Identities = 124/143 (86%), Positives = 138/143 (96%)
 Frame = +3

Query: 3   SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRVCIDG 182
           SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAV TSSFIPGYLAPRPAT+FRNR+CIDG
Sbjct: 210 SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVVTSSFIPGYLAPRPATMFRNRLCIDG 269

Query: 183 GVTLFMPPTSASKTVRVCAFPAERLGLEGIGISPDCNPENRASARELFNWALEPAEDHVL 362
           G+TLFMPPTSA++TVR+CAFPA ++GL+GIGISPDCNPENRAS RELF WALEPAEDHVL
Sbjct: 270 GLTLFMPPTSAAQTVRICAFPASQMGLQGIGISPDCNPENRASPRELFKWALEPAEDHVL 329

Query: 363 DRLFELGYLDASVWADQNPVEEI 431
           DRLFELGYLDA+VWA++NPV+ +
Sbjct: 330 DRLFELGYLDAAVWAEENPVQNV 352


>gb|ABK95138.1| unknown [Populus trichocarpa]
          Length = 416

 Score =  268 bits (684), Expect = 4e-70
 Identities = 124/143 (86%), Positives = 138/143 (96%)
 Frame = +3

Query: 3   SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRVCIDG 182
           SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAV TSSFIPGYLAPRPAT+FRNR+CIDG
Sbjct: 258 SNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVVTSSFIPGYLAPRPATMFRNRLCIDG 317

Query: 183 GVTLFMPPTSASKTVRVCAFPAERLGLEGIGISPDCNPENRASARELFNWALEPAEDHVL 362
           G+TLFMPPTSA++TVR+CAFPA ++GL+GIGISPDCNPENRAS RELF WALEPAEDHVL
Sbjct: 318 GLTLFMPPTSAAQTVRICAFPASQMGLQGIGISPDCNPENRASPRELFKWALEPAEDHVL 377

Query: 363 DRLFELGYLDASVWADQNPVEEI 431
           DRLFELGYLDA+VWA++NPV+ +
Sbjct: 378 DRLFELGYLDAAVWAEENPVQNV 400


Top