BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000645
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]              591   e-167
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              590   e-166
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   590   e-166
ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum] ...   589   e-166
ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...   588   e-166

>gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  591 bits (1524), Expect = e-167
 Identities = 287/327 (87%), Positives = 301/327 (92%)
 Frame = -2

Query: 981 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRDV 802
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD NKPCKLTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 801 EKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXXX 622
           EKPGSKLHKKETCEAVTIIETPPMVIVGVV YVKTPRGLR LNTVWAQHLSEE++RR   
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 621 XXXXXXXXXXXXXXXXFESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 442
                           +ES+EGKKD+Q QLEK+KKY  VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 441 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 262
           LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAMT 82
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYKLGKA QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVT 300

Query: 81  EFDRTEKDITPIGGFPHYGVVKEDYLL 1
           +FDRTEKDITP+GGFPHYGVVK+DYLL
Sbjct: 301 DFDRTEKDITPMGGFPHYGVVKDDYLL 327


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  590 bits (1520), Expect = e-166
 Identities = 283/328 (86%), Positives = 304/328 (92%)
 Frame = -2

Query: 984  RMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRD 805
            RMSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+LTAFLGYKAGMTHIVR+
Sbjct: 60   RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRE 119

Query: 804  VEKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXX 625
            VEKPGSKLHKKETCEAVTI+ETPPMVIVGVVAYVKTPRGLR+LNTVWAQHLSEEV+RR  
Sbjct: 120  VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFY 179

Query: 624  XXXXXXXXXXXXXXXXXFESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKA 445
                             +E+EEGKK +QAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKA
Sbjct: 180  KNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKA 239

Query: 444  HLMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 265
            HLMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVT
Sbjct: 240  HLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVT 299

Query: 264  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAM 85
            RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+
Sbjct: 300  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTAL 359

Query: 84   TEFDRTEKDITPIGGFPHYGVVKEDYLL 1
            TEFDRTEKDITP+GGFPHYGVVK+DY++
Sbjct: 360  TEFDRTEKDITPMGGFPHYGVVKDDYVM 387


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  590 bits (1520), Expect = e-166
 Identities = 283/328 (86%), Positives = 304/328 (92%)
 Frame = -2

Query: 984 RMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRD 805
           RMSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+LTAFLGYKAGMTHIVR+
Sbjct: 8   RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRE 67

Query: 804 VEKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXX 625
           VEKPGSKLHKKETCEAVTI+ETPPMVIVGVVAYVKTPRGLR+LNTVWAQHLSEEV+RR  
Sbjct: 68  VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFY 127

Query: 624 XXXXXXXXXXXXXXXXXFESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKA 445
                            +E+EEGKK +QAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKA
Sbjct: 128 KNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKA 187

Query: 444 HLMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 265
           HLMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVT
Sbjct: 188 HLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVT 247

Query: 264 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAM 85
           RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+
Sbjct: 248 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTAL 307

Query: 84  TEFDRTEKDITPIGGFPHYGVVKEDYLL 1
           TEFDRTEKDITP+GGFPHYGVVK+DY++
Sbjct: 308 TEFDRTEKDITPMGGFPHYGVVKDDYVM 335


>ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
           gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum
           lycopersicum]
          Length = 389

 Score =  589 bits (1519), Expect = e-166
 Identities = 285/327 (87%), Positives = 301/327 (92%)
 Frame = -2

Query: 981 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRDV 802
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPCKLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 801 EKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXXX 622
           EKPGSKLHKKETCEAVTI+ETPPMVIVGVV YVKTPRGLR LNTVWAQHLSE+++RR   
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120

Query: 621 XXXXXXXXXXXXXXXXFESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 442
                           +E++EGKKD+QAQLEK+KKY  VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 441 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 262
           LMEIQVNGG+IAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAMT 82
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK  QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALT 300

Query: 81  EFDRTEKDITPIGGFPHYGVVKEDYLL 1
           EFDRTEKDITPIGGFPHYGVVKEDYLL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLL 327


>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
           gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 389

 Score =  588 bits (1516), Expect = e-166
 Identities = 285/327 (87%), Positives = 299/327 (91%)
 Frame = -2

Query: 981 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRDV 802
           MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFP+DD  KPCKLTAFLGYKAGMTHI+R+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIMREV 60

Query: 801 EKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXXX 622
           EKPGSKLHKKETCEAVTIIETPPMVIVGVV YVKTPRGLR+LNTVWAQHLSEEV+RR   
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 621 XXXXXXXXXXXXXXXXFESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 442
                            E+EEGKK +QAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 441 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 262
           LMEIQVNGGTIAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAMT 82
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKGGQESHTAIT 300

Query: 81  EFDRTEKDITPIGGFPHYGVVKEDYLL 1
           E+DRTEKDITPIGGFPHYGVVK+DYL+
Sbjct: 301 EYDRTEKDITPIGGFPHYGVVKDDYLM 327