BLASTX nr result

ID: Coptis24_contig00000641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000641
         (2682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-14
ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus co...    86   5e-14
ref|XP_002509607.1| aminomethyltransferase, putative [Ricinus co...    85   1e-13
emb|CBI22149.3| unnamed protein product [Vitis vinifera]               77   2e-11
ref|XP_003538724.1| PREDICTED: putative transferase CAF17 homolo...    75   7e-11

>ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|222871091|gb|EEF08222.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 87.8 bits (216), Expect = 1e-14
 Identities = 42/92 (45%), Positives = 61/92 (66%)
 Frame = -2

Query: 404 LNPQAQELDQEVAPGS*VVDSASDNKIGSVTAGLRCLWMSLLRVEEVYKSSRVLSVKWQE 225
           L+   +E++Q+V PGS V+++AS  KIG VT  L C  + +LR++E +K S  L+++ QE
Sbjct: 306 LDDSGKEVEQKVGPGSEVINTASGKKIGYVTTALGCRGLGVLRLKEAFKGSGSLTIQGQE 365

Query: 224 DVTLEGSRPFIRS*WWWPAEWFT*HQQHSVAA 129
           D+ +E  RP      WWPAEWF+ HQQHS  A
Sbjct: 366 DIKVEAIRP-----KWWPAEWFSEHQQHSAVA 392


>ref|XP_002509611.1| aminomethyltransferase, putative [Ricinus communis]
           gi|223549510|gb|EEF50998.1| aminomethyltransferase,
           putative [Ricinus communis]
          Length = 391

 Score = 85.9 bits (211), Expect = 5e-14
 Identities = 42/92 (45%), Positives = 59/92 (64%)
 Frame = -2

Query: 404 LNPQAQELDQEVAPGS*VVDSASDNKIGSVTAGLRCLWMSLLRVEEVYKSSRVLSVKWQE 225
           L+    E++++VAPGS V+D+ S  K+G VTA L C  + +LR+EE +K S  L ++ Q+
Sbjct: 305 LDDNGTEVEEKVAPGSEVIDTTSSKKVGFVTAALGCRGLGVLRLEEAWKGSGSLIIEGQD 364

Query: 224 DVTLEGSRPFIRS*WWWPAEWFT*HQQHSVAA 129
           D+ +E  RP      WWPAEWF  HQQHS  A
Sbjct: 365 DLKVETIRP-----KWWPAEWFPEHQQHSAVA 391


>ref|XP_002509607.1| aminomethyltransferase, putative [Ricinus communis]
           gi|223549506|gb|EEF50994.1| aminomethyltransferase,
           putative [Ricinus communis]
          Length = 258

 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 42/92 (45%), Positives = 59/92 (64%)
 Frame = -2

Query: 404 LNPQAQELDQEVAPGS*VVDSASDNKIGSVTAGLRCLWMSLLRVEEVYKSSRVLSVKWQE 225
           L+    E++++VAPGS V+D+ S  K+G VTA L C  + +LR+EE +K S  L ++ Q+
Sbjct: 172 LDDSGTEVEEKVAPGSEVIDTTSCKKVGFVTAALGCRGLGVLRLEEAWKGSGSLIIEGQD 231

Query: 224 DVTLEGSRPFIRS*WWWPAEWFT*HQQHSVAA 129
           D+ +E  RP      WWPAEWF  HQQHS  A
Sbjct: 232 DLKVETIRP-----KWWPAEWFPEHQQHSAVA 258


>emb|CBI22149.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 38/92 (41%), Positives = 56/92 (60%)
 Frame = -2

Query: 404 LNPQAQELDQEVAPGS*VVDSASDNKIGSVTAGLRCLWMSLLRVEEVYKSSRVLSVKWQE 225
           L+   +E++Q+VAPGS V+++ S  K G+VT  L C  + LLR+ E  K    L+++ QE
Sbjct: 284 LDDSGKEMEQKVAPGSDVINAVSGKKAGTVTTALECRGLGLLRLNEALKGPSKLTIQGQE 343

Query: 224 DVTLEGSRPFIRS*WWWPAEWFT*HQQHSVAA 129
           DV +E  RP      WWP EWF  +QQ + +A
Sbjct: 344 DVKVEAIRP-----EWWPTEWFQEYQQDTASA 370


>ref|XP_003538724.1| PREDICTED: putative transferase CAF17 homolog, mitochondrial-like
           [Glycine max]
          Length = 410

 Score = 75.5 bits (184), Expect = 7e-11
 Identities = 41/92 (44%), Positives = 54/92 (58%)
 Frame = -2

Query: 404 LNPQAQELDQEVAPGS*VVDSASDNKIGSVTAGLRCLWMSLLRVEEVYKSSRVLSVKWQE 225
           L+   +EL  +V PGS V+++AS  K G+VT  L C  + LLRVEE  K S  LS++ QE
Sbjct: 324 LDNDGKELVNKVIPGSEVMNTASGKKAGTVTTALGCRGLGLLRVEEALKGSSALSIQGQE 383

Query: 224 DVTLEGSRPFIRS*WWWPAEWFT*HQQHSVAA 129
           DV +  SRP      WWP+EW     QH+  A
Sbjct: 384 DVKVVASRPD-----WWPSEWLQDQGQHAAFA 410


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