BLASTX nr result
ID: Coptis24_contig00000639
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000639 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298418.1| f-box family protein [Populus trichocarpa] g... 63 3e-08 gb|ABR18790.1| class S F-box protein [Nicotiana alata] 61 1e-07 dbj|BAJ24882.1| S5-locus linked F-box protein [Petunia x hybrida] 60 1e-07 dbj|BAJ24878.1| S-locus linked F-box protein type-6 [Petunia x h... 59 3e-07 dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x h... 59 3e-07 >ref|XP_002298418.1| f-box family protein [Populus trichocarpa] gi|222845676|gb|EEE83223.1| f-box family protein [Populus trichocarpa] Length = 363 Score = 62.8 bits (151), Expect = 3e-08 Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 16/141 (11%) Frame = +3 Query: 18 NGIYCWLG----EDESERHAILSFDFTTEVFKTMTVPD--VYGDVHGVDSPAYLRLALLR 179 NG+ W+G E + RHA ++F+ EVF MTVPD V+ D + + + L Sbjct: 193 NGVCHWIGYNSLERDEPRHATVAFNLGNEVFVQMTVPDCLVWDDFIDISLTVFDGMLSL- 251 Query: 180 ENLACIEWVFYSNDPYIWHCKIWVLNEYDVMESWTKLYTIE-------LELFAYPCAVLM 338 + C +W++ C +WV+ EY V ESWTKL+ IE L F VL+ Sbjct: 252 --VPCKKWLWEETS-----CSVWVMKEYGVGESWTKLFNIEHVEGIQRLVAFRENNEVLL 304 Query: 339 ---NGKIIGYGSNEGRLCFWD 392 +G++I Y N WD Sbjct: 305 AGEDGELISYDPNTNN---WD 322 >gb|ABR18790.1| class S F-box protein [Nicotiana alata] Length = 387 Score = 60.8 bits (146), Expect = 1e-07 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 2/136 (1%) Frame = +3 Query: 18 NGIYCWLGEDESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLACI 197 NG WLG D + IL FD +TE+F+ + +P H D +Y L +L E L I Sbjct: 224 NGASHWLGNDTTL--VILCFDMSTEIFRNIKMPSA---CHSNDGKSY-GLTVLNECLTLI 277 Query: 198 EWVFYS--NDPYIWHCKIWVLNEYDVMESWTKLYTIELELFAYPCAVLMNGKIIGYGSNE 371 + + S ND +W++ EYDV ESW K YTI L + ++ + Sbjct: 278 CYTYSSAVNDQAENLIDVWIMKEYDVNESWIKKYTIIRTLSIKSPLAVWKDHLLLIQTKN 337 Query: 372 GRLCFWDLVIQELKYF 419 G L +DL E+K + Sbjct: 338 GLLISYDLNSDEVKQY 353 >dbj|BAJ24882.1| S5-locus linked F-box protein [Petunia x hybrida] Length = 392 Score = 60.5 bits (145), Expect = 1e-07 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 6/133 (4%) Frame = +3 Query: 33 WLGEDESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLACIEWVF- 209 W+ + + IL FD ++EVF+++ +P+ + H + P + RLAL++E+L I + + Sbjct: 233 WIATQDLDAFRILCFDMSSEVFRSLKIPE---NCHLFEGP-WCRLALIQESLTLIYYRYP 288 Query: 210 -----YSNDPYIWHCKIWVLNEYDVMESWTKLYTIELELFAYPCAVLMNGKIIGYGSNEG 374 D + +W++ +Y V ESW K YTI P AV G ++ + G Sbjct: 289 DQSTAQGKDSSV----VWIMKDYSVHESWVKNYTITSVPIHSPLAV-WKGYLLVFEGKSG 343 Query: 375 RLCFWDLVIQELK 413 L +DL+ ++K Sbjct: 344 CLMSYDLICNKIK 356 >dbj|BAJ24878.1| S-locus linked F-box protein type-6 [Petunia x hybrida] Length = 393 Score = 59.3 bits (142), Expect = 3e-07 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%) Frame = +3 Query: 33 WLGEDESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLACIEWVFY 212 W+ + + + IL FD ++E F+++ +P+ H ++ P RLAL+ + L I + + Sbjct: 234 WIASLDIDAYIILCFDMSSETFRSLKIPE---SCHIINGPT-CRLALVHDTLTLIYYPYP 289 Query: 213 SNDPYIWH--CKIWVLNEYDVMESWTKLYTIELELFAYPCAVLMNGKIIGYGSNEGRLCF 386 + + IW +NEY+V ESW + YTI L P V G ++ Y S G L Sbjct: 290 EPEIPVEKDFINIWFMNEYNVYESWIRKYTIRGLLIDSPLTV-WKGYLLLYQSRSGCLMS 348 Query: 387 WDLVIQELKYF 419 ++L +++ F Sbjct: 349 YNLNYNDVREF 359 >dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x hybrida] Length = 402 Score = 59.3 bits (142), Expect = 3e-07 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 4/136 (2%) Frame = +3 Query: 18 NGIYCWLGE-DESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLA- 191 NG Y W+ + ++ IL FD +TE+F+ + PD S L LL E L+ Sbjct: 237 NGAYHWITTLNHEDKLIILCFDMSTEIFRNINTPDT----RQFSSGTCHSLVLLDECLSF 292 Query: 192 -CIEWVFYSNDPYIWHCKIWVLNEYDVMESWTKLYTIE-LELFAYPCAVLMNGKIIGYGS 365 C ++ DP IW++ +Y+V ESWTK YTI L + P AV + +I G Sbjct: 293 MCHPYLGPEIDPTTDLIDIWMMKDYNVYESWTKKYTIRVLPIDESPLAVWKDSLLIFQGK 352 Query: 366 NEGRLCFWDLVIQELK 413 + G L +D +E+K Sbjct: 353 S-GYLMSYDFKSEEVK 367