BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000639
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298418.1| f-box family protein [Populus trichocarpa] g...    63   3e-08
gb|ABR18790.1| class S F-box protein [Nicotiana alata]                 61   1e-07
dbj|BAJ24882.1| S5-locus linked F-box protein [Petunia x hybrida]      60   1e-07
dbj|BAJ24878.1| S-locus linked F-box protein type-6 [Petunia x h...    59   3e-07
dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x h...    59   3e-07

>ref|XP_002298418.1| f-box family protein [Populus trichocarpa]
           gi|222845676|gb|EEE83223.1| f-box family protein
           [Populus trichocarpa]
          Length = 363

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
 Frame = +3

Query: 18  NGIYCWLG----EDESERHAILSFDFTTEVFKTMTVPD--VYGDVHGVDSPAYLRLALLR 179
           NG+  W+G    E +  RHA ++F+   EVF  MTVPD  V+ D   +    +  +  L 
Sbjct: 193 NGVCHWIGYNSLERDEPRHATVAFNLGNEVFVQMTVPDCLVWDDFIDISLTVFDGMLSL- 251

Query: 180 ENLACIEWVFYSNDPYIWHCKIWVLNEYDVMESWTKLYTIE-------LELFAYPCAVLM 338
             + C +W++         C +WV+ EY V ESWTKL+ IE       L  F     VL+
Sbjct: 252 --VPCKKWLWEETS-----CSVWVMKEYGVGESWTKLFNIEHVEGIQRLVAFRENNEVLL 304

Query: 339 ---NGKIIGYGSNEGRLCFWD 392
              +G++I Y  N      WD
Sbjct: 305 AGEDGELISYDPNTNN---WD 322


>gb|ABR18790.1| class S F-box protein [Nicotiana alata]
          Length = 387

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
 Frame = +3

Query: 18  NGIYCWLGEDESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLACI 197
           NG   WLG D +    IL FD +TE+F+ + +P      H  D  +Y  L +L E L  I
Sbjct: 224 NGASHWLGNDTTL--VILCFDMSTEIFRNIKMPSA---CHSNDGKSY-GLTVLNECLTLI 277

Query: 198 EWVFYS--NDPYIWHCKIWVLNEYDVMESWTKLYTIELELFAYPCAVLMNGKIIGYGSNE 371
            + + S  ND       +W++ EYDV ESW K YTI   L       +    ++   +  
Sbjct: 278 CYTYSSAVNDQAENLIDVWIMKEYDVNESWIKKYTIIRTLSIKSPLAVWKDHLLLIQTKN 337

Query: 372 GRLCFWDLVIQELKYF 419
           G L  +DL   E+K +
Sbjct: 338 GLLISYDLNSDEVKQY 353


>dbj|BAJ24882.1| S5-locus linked F-box protein [Petunia x hybrida]
          Length = 392

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
 Frame = +3

Query: 33  WLGEDESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLACIEWVF- 209
           W+   + +   IL FD ++EVF+++ +P+   + H  + P + RLAL++E+L  I + + 
Sbjct: 233 WIATQDLDAFRILCFDMSSEVFRSLKIPE---NCHLFEGP-WCRLALIQESLTLIYYRYP 288

Query: 210 -----YSNDPYIWHCKIWVLNEYDVMESWTKLYTIELELFAYPCAVLMNGKIIGYGSNEG 374
                   D  +    +W++ +Y V ESW K YTI       P AV   G ++ +    G
Sbjct: 289 DQSTAQGKDSSV----VWIMKDYSVHESWVKNYTITSVPIHSPLAV-WKGYLLVFEGKSG 343

Query: 375 RLCFWDLVIQELK 413
            L  +DL+  ++K
Sbjct: 344 CLMSYDLICNKIK 356


>dbj|BAJ24878.1| S-locus linked F-box protein type-6 [Petunia x hybrida]
          Length = 393

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
 Frame = +3

Query: 33  WLGEDESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLACIEWVFY 212
           W+   + + + IL FD ++E F+++ +P+     H ++ P   RLAL+ + L  I + + 
Sbjct: 234 WIASLDIDAYIILCFDMSSETFRSLKIPE---SCHIINGPT-CRLALVHDTLTLIYYPYP 289

Query: 213 SNDPYIWH--CKIWVLNEYDVMESWTKLYTIELELFAYPCAVLMNGKIIGYGSNEGRLCF 386
             +  +      IW +NEY+V ESW + YTI   L   P  V   G ++ Y S  G L  
Sbjct: 290 EPEIPVEKDFINIWFMNEYNVYESWIRKYTIRGLLIDSPLTV-WKGYLLLYQSRSGCLMS 348

Query: 387 WDLVIQELKYF 419
           ++L   +++ F
Sbjct: 349 YNLNYNDVREF 359


>dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x hybrida]
          Length = 402

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
 Frame = +3

Query: 18  NGIYCWLGE-DESERHAILSFDFTTEVFKTMTVPDVYGDVHGVDSPAYLRLALLRENLA- 191
           NG Y W+   +  ++  IL FD +TE+F+ +  PD         S     L LL E L+ 
Sbjct: 237 NGAYHWITTLNHEDKLIILCFDMSTEIFRNINTPDT----RQFSSGTCHSLVLLDECLSF 292

Query: 192 -CIEWVFYSNDPYIWHCKIWVLNEYDVMESWTKLYTIE-LELFAYPCAVLMNGKIIGYGS 365
            C  ++    DP      IW++ +Y+V ESWTK YTI  L +   P AV  +  +I  G 
Sbjct: 293 MCHPYLGPEIDPTTDLIDIWMMKDYNVYESWTKKYTIRVLPIDESPLAVWKDSLLIFQGK 352

Query: 366 NEGRLCFWDLVIQELK 413
           + G L  +D   +E+K
Sbjct: 353 S-GYLMSYDFKSEEVK 367