BLASTX nr result

ID: Coptis24_contig00000629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000629
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45702.1| unknown [Lotus japonicus]                              384   e-104
emb|CBI22797.3| unnamed protein product [Vitis vinifera]              382   e-103
ref|XP_002265093.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   382   e-103
ref|XP_003632580.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   377   e-102
ref|NP_001239831.1| uncharacterized protein LOC100793126 [Glycin...   376   e-102

>gb|AFK45702.1| unknown [Lotus japonicus]
          Length = 238

 Score =  384 bits (987), Expect = e-104
 Identities = 185/238 (77%), Positives = 201/238 (84%), Gaps = 2/238 (0%)
 Frame = +1

Query: 79  ISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXXXX 258
           ++S PRTVEEIFKDY+ RR  I+RALT DVDEFY LCDP+KENLCLYGHPN+SW      
Sbjct: 1   MASSPRTVEEIFKDYTARRDAILRALTQDVDEFYGLCDPDKENLCLYGHPNESWEVTLPA 60

Query: 259 XXXXXXXXXXXXGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLFNL 438
                       GINFARDGM RRDWLSLVA+HSDSWLLSVAFYL A  NRNERKRLF+L
Sbjct: 61  EEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSL 120

Query: 439 INDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVK--NNKLADEAYMEDEDEH 612
           INDLPTVFEVVTERKP+K+KP+VDSGSKSR GTKRSSDGQVK  N K ADE Y EDEDEH
Sbjct: 121 INDLPTVFEVVTERKPIKDKPTVDSGSKSRGGTKRSSDGQVKSSNPKFADEGYEEDEDEH 180

Query: 613 SETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 786
           SETLCG+CGGNYNA+EFWIGCD+CERWYHGKCVKITPAKAE+IKQYKCPSCS MK+ R
Sbjct: 181 SETLCGSCGGNYNADEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCS-MKRSR 237


>emb|CBI22797.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  382 bits (980), Expect = e-103
 Identities = 180/240 (75%), Positives = 203/240 (84%), Gaps = 2/240 (0%)
 Frame = +1

Query: 73  APISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXX 252
           A ISS PRTVEEIFKDYSGRR G++RALT+DVDEFY LCDPEKENLCLYGHPND+W    
Sbjct: 2   ASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWEVTL 61

Query: 253 XXXXXXXXXXXXXXGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLF 432
                         GINFARDGM R+DWLSLVA+HSDSWLLS AFYL A  NRNERKRLF
Sbjct: 62  PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERKRLF 121

Query: 433 NLINDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVKNNK--LADEAYMEDED 606
           ++INDLPTVFEVVTERKP+K+KPSVDSGSKSR+ TKR ++GQVK+     ADE++ E+ED
Sbjct: 122 SMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKRGNEGQVKSTPKLAADESFEEEED 181

Query: 607 EHSETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 786
           EHSETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +K+ R
Sbjct: 182 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LKRSR 240


>ref|XP_002265093.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 1 [Vitis
           vinifera]
          Length = 243

 Score =  382 bits (980), Expect = e-103
 Identities = 180/240 (75%), Positives = 203/240 (84%), Gaps = 2/240 (0%)
 Frame = +1

Query: 73  APISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXX 252
           A ISS PRTVEEIFKDYSGRR G++RALT+DVDEFY LCDPEKENLCLYGHPND+W    
Sbjct: 4   ASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWEVTL 63

Query: 253 XXXXXXXXXXXXXXGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLF 432
                         GINFARDGM R+DWLSLVA+HSDSWLLS AFYL A  NRNERKRLF
Sbjct: 64  PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERKRLF 123

Query: 433 NLINDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVKNNK--LADEAYMEDED 606
           ++INDLPTVFEVVTERKP+K+KPSVDSGSKSR+ TKR ++GQVK+     ADE++ E+ED
Sbjct: 124 SMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKRGNEGQVKSTPKLAADESFEEEED 183

Query: 607 EHSETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 786
           EHSETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +K+ R
Sbjct: 184 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LKRSR 242


>ref|XP_003632580.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 3 [Vitis
           vinifera]
          Length = 244

 Score =  377 bits (968), Expect = e-102
 Identities = 180/241 (74%), Positives = 203/241 (84%), Gaps = 3/241 (1%)
 Frame = +1

Query: 73  APISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXX 252
           A ISS PRTVEEIFKDYSGRR G++RALT+DVDEFY LCDPEKENLCLYGHPND+W    
Sbjct: 4   ASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWEVTL 63

Query: 253 XXXXXXXXXXXXXXGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLF 432
                         GINFARDGM R+DWLSLVA+HSDSWLLS AFYL A  NRNERKRLF
Sbjct: 64  PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERKRLF 123

Query: 433 NLINDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTK-RSSDGQVKNNK--LADEAYMEDE 603
           ++INDLPTVFEVVTERKP+K+KPSVDSGSKSR+ TK R ++GQVK+     ADE++ E+E
Sbjct: 124 SMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKVRGNEGQVKSTPKLAADESFEEEE 183

Query: 604 DEHSETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKG 783
           DEHSETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +K+ 
Sbjct: 184 DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LKRS 242

Query: 784 R 786
           R
Sbjct: 243 R 243


>ref|NP_001239831.1| uncharacterized protein LOC100793126 [Glycine max]
           gi|255635147|gb|ACU17930.1| unknown [Glycine max]
          Length = 238

 Score =  376 bits (965), Expect = e-102
 Identities = 181/237 (76%), Positives = 202/237 (85%), Gaps = 1/237 (0%)
 Frame = +1

Query: 79  ISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXXXX 258
           ++S PRTVEEIFKDY+ RRT I+RAL+ DVDEFY LCDP+KENLCLYGHPN++W      
Sbjct: 3   MTSTPRTVEEIFKDYTARRTAIVRALSQDVDEFYGLCDPDKENLCLYGHPNETWEVTLPA 62

Query: 259 XXXXXXXXXXXXGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLFNL 438
                       GINFARDGM RRDWLSLVA+HSDSWLLSVAFYL A  NRNERKRLF+L
Sbjct: 63  EEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSL 122

Query: 439 INDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVKNN-KLADEAYMEDEDEHS 615
           INDLPTVFEVVTERKPVK+KP+ DSGSKSR  TKRSSDGQVK+N K ADE Y E+EDEHS
Sbjct: 123 INDLPTVFEVVTERKPVKDKPTADSGSKSRGSTKRSSDGQVKSNPKFADEGY-EEEDEHS 181

Query: 616 ETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 786
           ETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +++GR
Sbjct: 182 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LRRGR 237


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