BLASTX nr result
ID: Coptis24_contig00000625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000625
(670 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea m... 358 7e-97
tpg|DAA53731.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea m... 358 7e-97
emb|CBI26949.3| unnamed protein product [Vitis vinifera] 358 7e-97
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica... 358 7e-97
ref|XP_002457482.1| hypothetical protein SORBIDRAFT_03g008040 [S... 356 3e-96
>tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
Length = 1381
Score = 358 bits (918), Expect = 7e-97
Identities = 171/222 (77%), Positives = 199/222 (89%)
Frame = -1
Query: 670 RRGRAGRVQPGVCFRLYPRCVYDAFADNQLPELLRTPLQSICLQIKSLQLGSISEFLSRA 491
RRGRAGRVQPG C+ LYPRCVYDAFAD QLPELLRTPLQS+CLQIKSL+LGSISEFLSRA
Sbjct: 868 RRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLRLGSISEFLSRA 927
Query: 490 LQSPELLSIQNAIEYLKIIGALDEEEKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPI 311
LQSPE LS+QNAIEYLK+IGA D+ E+LT+LG+HLS+LPVEP+LGKMLI GAIFNCLDPI
Sbjct: 928 LQSPESLSVQNAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPI 987
Query: 310 LTVVAGLSVRDPFLMPTDKKDLAEHAKAQFAAGDNSDHLALIRAYEGWKNAEREYSGPDY 131
LT+V+GLSVRDPFL P DKKDLAE AK QF+ D SDHLAL+RAY+GW+ AER+ +G DY
Sbjct: 988 LTIVSGLSVRDPFLTPFDKKDLAESAKLQFSCRDYSDHLALVRAYDGWREAERDRAGYDY 1047
Query: 130 CWKNFLSSPTLKAIDSLRKEFICILKDTGVVDDDLHIYNLWS 5
CWKNFLS TLKAIDSLR++F+ +LKDTG+VD+++ + N WS
Sbjct: 1048 CWKNFLSVQTLKAIDSLRRQFLFLLKDTGLVDENMTMCNKWS 1089
>tpg|DAA53731.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
Length = 1125
Score = 358 bits (918), Expect = 7e-97
Identities = 171/222 (77%), Positives = 199/222 (89%)
Frame = -1
Query: 670 RRGRAGRVQPGVCFRLYPRCVYDAFADNQLPELLRTPLQSICLQIKSLQLGSISEFLSRA 491
RRGRAGRVQPG C+ LYPRCVYDAFAD QLPELLRTPLQS+CLQIKSL+LGSISEFLSRA
Sbjct: 868 RRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLRLGSISEFLSRA 927
Query: 490 LQSPELLSIQNAIEYLKIIGALDEEEKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPI 311
LQSPE LS+QNAIEYLK+IGA D+ E+LT+LG+HLS+LPVEP+LGKMLI GAIFNCLDPI
Sbjct: 928 LQSPESLSVQNAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPI 987
Query: 310 LTVVAGLSVRDPFLMPTDKKDLAEHAKAQFAAGDNSDHLALIRAYEGWKNAEREYSGPDY 131
LT+V+GLSVRDPFL P DKKDLAE AK QF+ D SDHLAL+RAY+GW+ AER+ +G DY
Sbjct: 988 LTIVSGLSVRDPFLTPFDKKDLAESAKLQFSCRDYSDHLALVRAYDGWREAERDRAGYDY 1047
Query: 130 CWKNFLSSPTLKAIDSLRKEFICILKDTGVVDDDLHIYNLWS 5
CWKNFLS TLKAIDSLR++F+ +LKDTG+VD+++ + N WS
Sbjct: 1048 CWKNFLSVQTLKAIDSLRRQFLFLLKDTGLVDENMTMCNKWS 1089
>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
Length = 1181
Score = 358 bits (918), Expect = 7e-97
Identities = 173/222 (77%), Positives = 200/222 (90%)
Frame = -1
Query: 670 RRGRAGRVQPGVCFRLYPRCVYDAFADNQLPELLRTPLQSICLQIKSLQLGSISEFLSRA 491
RRGRAGRVQPG C+ LYPRCVYDAFAD QLPE+LRTPLQS+CLQIKSL+LGSISEFLSRA
Sbjct: 674 RRGRAGRVQPGKCYHLYPRCVYDAFADYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRA 733
Query: 490 LQSPELLSIQNAIEYLKIIGALDEEEKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPI 311
LQSPELL++QNAIEYLKIIGALDE E LT+LGRHL++LP+EP+LGKMLI+GA+FNCLDPI
Sbjct: 734 LQSPELLAVQNAIEYLKIIGALDENENLTVLGRHLTMLPMEPKLGKMLILGAVFNCLDPI 793
Query: 310 LTVVAGLSVRDPFLMPTDKKDLAEHAKAQFAAGDNSDHLALIRAYEGWKNAEREYSGPDY 131
LT+VAGLSVRDPFL P DKKDLAE AKAQF + D SDHLAL+RAYEGWK+AE++ G +Y
Sbjct: 794 LTIVAGLSVRDPFLTPLDKKDLAEAAKAQF-SHDYSDHLALVRAYEGWKDAEKDQIGYEY 852
Query: 130 CWKNFLSSPTLKAIDSLRKEFICILKDTGVVDDDLHIYNLWS 5
CWKNFLS+ ++KAIDSLRKEF +LKDT +VD ++ YN WS
Sbjct: 853 CWKNFLSAQSMKAIDSLRKEFFSLLKDTDLVDGNMATYNAWS 894
>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 1195
Score = 358 bits (918), Expect = 7e-97
Identities = 173/222 (77%), Positives = 200/222 (90%)
Frame = -1
Query: 670 RRGRAGRVQPGVCFRLYPRCVYDAFADNQLPELLRTPLQSICLQIKSLQLGSISEFLSRA 491
RRGRAGRVQPG C+ LYPRCVYDAFAD QLPE+LRTPLQS+CLQIKSL+LGSISEFLSRA
Sbjct: 688 RRGRAGRVQPGKCYHLYPRCVYDAFADYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRA 747
Query: 490 LQSPELLSIQNAIEYLKIIGALDEEEKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPI 311
LQSPELL++QNAIEYLKIIGALDE E LT+LGRHL++LP+EP+LGKMLI+GA+FNCLDPI
Sbjct: 748 LQSPELLAVQNAIEYLKIIGALDENENLTVLGRHLTMLPMEPKLGKMLILGAVFNCLDPI 807
Query: 310 LTVVAGLSVRDPFLMPTDKKDLAEHAKAQFAAGDNSDHLALIRAYEGWKNAEREYSGPDY 131
LT+VAGLSVRDPFL P DKKDLAE AKAQF + D SDHLAL+RAYEGWK+AE++ G +Y
Sbjct: 808 LTIVAGLSVRDPFLTPLDKKDLAEAAKAQF-SHDYSDHLALVRAYEGWKDAEKDQIGYEY 866
Query: 130 CWKNFLSSPTLKAIDSLRKEFICILKDTGVVDDDLHIYNLWS 5
CWKNFLS+ ++KAIDSLRKEF +LKDT +VD ++ YN WS
Sbjct: 867 CWKNFLSAQSMKAIDSLRKEFFSLLKDTDLVDGNMATYNAWS 908
>ref|XP_002457482.1| hypothetical protein SORBIDRAFT_03g008040 [Sorghum bicolor]
gi|241929457|gb|EES02602.1| hypothetical protein
SORBIDRAFT_03g008040 [Sorghum bicolor]
Length = 1390
Score = 356 bits (913), Expect = 3e-96
Identities = 171/222 (77%), Positives = 198/222 (89%)
Frame = -1
Query: 670 RRGRAGRVQPGVCFRLYPRCVYDAFADNQLPELLRTPLQSICLQIKSLQLGSISEFLSRA 491
RRGRAGRVQPG C+ LYPR VYDAFAD QLPELLRTPLQS+CLQIKSL+LGSISEFLSRA
Sbjct: 876 RRGRAGRVQPGECYHLYPRSVYDAFADYQLPELLRTPLQSLCLQIKSLRLGSISEFLSRA 935
Query: 490 LQSPELLSIQNAIEYLKIIGALDEEEKLTILGRHLSILPVEPRLGKMLIMGAIFNCLDPI 311
LQSPE LS+QNAIEYLK+IGA D+ E+LT+LG+HLS+LPVEP+LGKMLI GAIFNCLDPI
Sbjct: 936 LQSPESLSVQNAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPI 995
Query: 310 LTVVAGLSVRDPFLMPTDKKDLAEHAKAQFAAGDNSDHLALIRAYEGWKNAEREYSGPDY 131
LT+V+GLSVRDPFL P DKKDLAE AK QF+ D SDHLAL+RAYEGW+ AER+ +G DY
Sbjct: 996 LTIVSGLSVRDPFLTPFDKKDLAESAKLQFSCRDYSDHLALVRAYEGWREAERDRAGYDY 1055
Query: 130 CWKNFLSSPTLKAIDSLRKEFICILKDTGVVDDDLHIYNLWS 5
CWKNFLS TLKAIDSLR++F+ +LKDTG+VD+++ + N WS
Sbjct: 1056 CWKNFLSVQTLKAIDSLRRQFLFLLKDTGLVDENMTVCNKWS 1097