BLASTX nr result
ID: Coptis24_contig00000621
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000621 (442 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK255... 219 1e-55 gb|ABK22422.1| unknown [Picea sitchensis] 219 2e-55 gb|ACN41123.1| unknown [Picea sitchensis] 217 7e-55 emb|CBI25023.3| unnamed protein product [Vitis vinifera] 215 3e-54 ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersi... 215 3e-54 >gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK25531.1| unknown [Picea sitchensis] gi|116793494|gb|ABK26768.1| unknown [Picea sitchensis] gi|148905787|gb|ABR16057.1| unknown [Picea sitchensis] gi|224285099|gb|ACN40277.1| unknown [Picea sitchensis] Length = 146 Score = 219 bits (559), Expect = 1e-55 Identities = 111/120 (92%), Positives = 116/120 (96%) Frame = -1 Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182 MGRVRTKTVKKSSRQ+IERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR Sbjct: 1 MGRVRTKTVKKSSRQIIERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60 Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2 IQRGPVRGISLKLQEEERERRMDFVPEESAIK E IEVDKETMDMLA+LGM+DL GV +Q Sbjct: 61 IQRGPVRGISLKLQEEERERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120 >gb|ABK22422.1| unknown [Picea sitchensis] Length = 145 Score = 219 bits (558), Expect = 2e-55 Identities = 110/120 (91%), Positives = 117/120 (97%) Frame = -1 Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182 MGRVRTKTVKKSSRQV+ERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR Sbjct: 1 MGRVRTKTVKKSSRQVLERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60 Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2 IQRGPVRGISLKLQEEERERRMDFVP+ESAIK++ IEVDKETMDMLA+LGMADL GV +Q Sbjct: 61 IQRGPVRGISLKLQEEERERRMDFVPDESAIKIDVIEVDKETMDMLASLGMADLPGVVKQ 120 >gb|ACN41123.1| unknown [Picea sitchensis] Length = 146 Score = 217 bits (553), Expect = 7e-55 Identities = 110/120 (91%), Positives = 115/120 (95%) Frame = -1 Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182 MGRVR KTVKKSSRQ+IERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR Sbjct: 1 MGRVRPKTVKKSSRQIIERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60 Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2 IQRGPVRGISLKLQEEERERRMDFVPEESAIK E IEVDKETMDMLA+LGM+DL GV +Q Sbjct: 61 IQRGPVRGISLKLQEEERERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120 >emb|CBI25023.3| unnamed protein product [Vitis vinifera] Length = 170 Score = 215 bits (547), Expect = 3e-54 Identities = 109/120 (90%), Positives = 117/120 (97%) Frame = -1 Query: 370 SSNMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHL 191 SS+MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHL Sbjct: 24 SSDMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHL 83 Query: 190 MKRIQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGV 11 MKRIQ+GPVRGISLKLQEEERERRMDFVP+ESAIK + I+VDKET+DML+ALGMA+L GV Sbjct: 84 MKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETIDMLSALGMAELPGV 143 >ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersicum] gi|20141760|sp|P49215.3|RS17_SOLLC RecName: Full=40S ribosomal protein S17 gi|5758304|gb|AAD50774.1|AF161704_1 40S ribosomal protein S17 [Solanum lycopersicum] Length = 144 Score = 215 bits (547), Expect = 3e-54 Identities = 108/120 (90%), Positives = 116/120 (96%) Frame = -1 Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182 MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60 Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2 IQ+GPVRGISLKLQEEERERRMDFVP+ESAIK + IEVDKET+DML+ALGM+DL GV +Q Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQ 120