BLASTX nr result

ID: Coptis24_contig00000621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000621
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK255...   219   1e-55
gb|ABK22422.1| unknown [Picea sitchensis]                             219   2e-55
gb|ACN41123.1| unknown [Picea sitchensis]                             217   7e-55
emb|CBI25023.3| unnamed protein product [Vitis vinifera]              215   3e-54
ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersi...   215   3e-54

>gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK25531.1| unknown
           [Picea sitchensis] gi|116793494|gb|ABK26768.1| unknown
           [Picea sitchensis] gi|148905787|gb|ABR16057.1| unknown
           [Picea sitchensis] gi|224285099|gb|ACN40277.1| unknown
           [Picea sitchensis]
          Length = 146

 Score =  219 bits (559), Expect = 1e-55
 Identities = 111/120 (92%), Positives = 116/120 (96%)
 Frame = -1

Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182
           MGRVRTKTVKKSSRQ+IERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQIIERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2
           IQRGPVRGISLKLQEEERERRMDFVPEESAIK E IEVDKETMDMLA+LGM+DL GV +Q
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120


>gb|ABK22422.1| unknown [Picea sitchensis]
          Length = 145

 Score =  219 bits (558), Expect = 2e-55
 Identities = 110/120 (91%), Positives = 117/120 (97%)
 Frame = -1

Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182
           MGRVRTKTVKKSSRQV+ERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVLERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2
           IQRGPVRGISLKLQEEERERRMDFVP+ESAIK++ IEVDKETMDMLA+LGMADL GV +Q
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPDESAIKIDVIEVDKETMDMLASLGMADLPGVVKQ 120


>gb|ACN41123.1| unknown [Picea sitchensis]
          Length = 146

 Score =  217 bits (553), Expect = 7e-55
 Identities = 110/120 (91%), Positives = 115/120 (95%)
 Frame = -1

Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182
           MGRVR KTVKKSSRQ+IERYYSRMTLDFHTNKKI+EEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRPKTVKKSSRQIIERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2
           IQRGPVRGISLKLQEEERERRMDFVPEESAIK E IEVDKETMDMLA+LGM+DL GV +Q
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120


>emb|CBI25023.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  215 bits (547), Expect = 3e-54
 Identities = 109/120 (90%), Positives = 117/120 (97%)
 Frame = -1

Query: 370 SSNMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHL 191
           SS+MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHL
Sbjct: 24  SSDMGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHL 83

Query: 190 MKRIQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGV 11
           MKRIQ+GPVRGISLKLQEEERERRMDFVP+ESAIK + I+VDKET+DML+ALGMA+L GV
Sbjct: 84  MKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETIDMLSALGMAELPGV 143


>ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersicum]
           gi|20141760|sp|P49215.3|RS17_SOLLC RecName: Full=40S
           ribosomal protein S17
           gi|5758304|gb|AAD50774.1|AF161704_1 40S ribosomal
           protein S17 [Solanum lycopersicum]
          Length = 144

 Score =  215 bits (547), Expect = 3e-54
 Identities = 108/120 (90%), Positives = 116/120 (96%)
 Frame = -1

Query: 361 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 182
           MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 181 IQRGPVRGISLKLQEEERERRMDFVPEESAIKVETIEVDKETMDMLAALGMADLEGVTRQ 2
           IQ+GPVRGISLKLQEEERERRMDFVP+ESAIK + IEVDKET+DML+ALGM+DL GV +Q
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQ 120


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