BLASTX nr result

ID: Coptis24_contig00000614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000614
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26798.1| unknown [Picea sitchensis] gi|224286069|gb|ACN407...   127   1e-48
gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein...   122   2e-47
emb|CBI15540.3| unnamed protein product [Vitis vinifera]              126   3e-46
gb|AFK36580.1| unknown [Medicago truncatula]                          122   5e-46
ref|XP_003631071.1| Guanine nucleotide-binding protein subunit b...   122   5e-46

>gb|ABK26798.1| unknown [Picea sitchensis] gi|224286069|gb|ACN40746.1| unknown
           [Picea sitchensis] gi|224286410|gb|ACN40912.1| unknown
           [Picea sitchensis]
          Length = 316

 Score =  127 bits (319), Expect(2) = 1e-48
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -2

Query: 427 MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 248
           MAE + LRGTM+GHTD VTAIATPIDNSDMIVSSSRDKSIL+W L ++ E YGVP+RRLT
Sbjct: 1   MAEALVLRGTMEGHTDAVTAIATPIDNSDMIVSSSRDKSILLWNLTKEPEKYGVPRRRLT 60

Query: 247 GHSHFVQDVVLSSDG 203
           GHSHFVQDVV+SSDG
Sbjct: 61  GHSHFVQDVVISSDG 75



 Score = 90.9 bits (224), Expect(2) = 1e-48
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 FALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQIV 3
           FALSGSWD ELRLWD+NTG+TTRRFVGHTKDVLSVAFSIDNRQIV
Sbjct: 77  FALSGSWDSELRLWDLNTGLTTRRFVGHTKDVLSVAFSIDNRQIV 121


>gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein subunit beta
           [Eschscholzia californica]
          Length = 313

 Score =  122 bits (307), Expect(2) = 2e-47
 Identities = 59/75 (78%), Positives = 68/75 (90%)
 Frame = -2

Query: 427 MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 248
           M++ + LRGT+KGH D+VTAIATPIDNSDMIVSSSRDKSILVW L ++  +YGVP+RRLT
Sbjct: 1   MSDVLVLRGTLKGHDDMVTAIATPIDNSDMIVSSSRDKSILVWHLTKEDPTYGVPRRRLT 60

Query: 247 GHSHFVQDVVLSSDG 203
           GHSHFVQDVVLSSDG
Sbjct: 61  GHSHFVQDVVLSSDG 75



 Score = 91.7 bits (226), Expect(2) = 2e-47
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 FALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQIV 3
           FALSG+WDGELRLWD+NTG TTRRFVGHTKDVLSVAFSIDNRQIV
Sbjct: 77  FALSGAWDGELRLWDLNTGTTTRRFVGHTKDVLSVAFSIDNRQIV 121


>emb|CBI15540.3| unnamed protein product [Vitis vinifera]
          Length = 1318

 Score =  126 bits (317), Expect(2) = 3e-46
 Identities = 60/76 (78%), Positives = 70/76 (92%)
 Frame = -2

Query: 430  KMAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRL 251
            KMAE + LRGTM+ HTD+VTAIATPIDNSDMIV+SSRDKSI++W L +D ++YGVP+RRL
Sbjct: 1055 KMAETLVLRGTMRAHTDMVTAIATPIDNSDMIVTSSRDKSIILWHLTKDDKTYGVPRRRL 1114

Query: 250  TGHSHFVQDVVLSSDG 203
            TGHSHFVQDVVLSSDG
Sbjct: 1115 TGHSHFVQDVVLSSDG 1130



 Score = 84.0 bits (206), Expect(2) = 3e-46
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -1

Query: 137  FALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQIV 3
            FALSGSWDGELRLWD+  G + RRFVGHTKDVLSVAFS+DNRQIV
Sbjct: 1132 FALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSVDNRQIV 1176


>gb|AFK36580.1| unknown [Medicago truncatula]
          Length = 325

 Score =  122 bits (306), Expect(2) = 5e-46
 Identities = 57/75 (76%), Positives = 69/75 (92%)
 Frame = -2

Query: 427 MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 248
           MAE + LRGTM+ HTD+VTAIATPIDNSDMIV++SRDKSI++W L ++ ++YGVP+RRLT
Sbjct: 1   MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLT 60

Query: 247 GHSHFVQDVVLSSDG 203
           GHSHFVQDVVLSSDG
Sbjct: 61  GHSHFVQDVVLSSDG 75



 Score = 87.4 bits (215), Expect(2) = 5e-46
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = -1

Query: 137 FALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQIV 3
           FALSGSWDGELRLWD+N G + RRFVGHTKDVLSVAFSIDNRQIV
Sbjct: 77  FALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIV 121


>ref|XP_003631071.1| Guanine nucleotide-binding protein subunit beta-like protein
           [Medicago truncatula] gi|355525093|gb|AET05547.1|
           Guanine nucleotide-binding protein subunit beta-like
           protein [Medicago truncatula]
          Length = 325

 Score =  122 bits (306), Expect(2) = 5e-46
 Identities = 57/75 (76%), Positives = 69/75 (92%)
 Frame = -2

Query: 427 MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 248
           MAE + LRGTM+ HTD+VTAIATPIDNSDMIV++SRDKSI++W L ++ ++YGVP+RRLT
Sbjct: 1   MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLT 60

Query: 247 GHSHFVQDVVLSSDG 203
           GHSHFVQDVVLSSDG
Sbjct: 61  GHSHFVQDVVLSSDG 75



 Score = 87.4 bits (215), Expect(2) = 5e-46
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = -1

Query: 137 FALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQIV 3
           FALSGSWDGELRLWD+N G + RRFVGHTKDVLSVAFSIDNRQIV
Sbjct: 77  FALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIV 121


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