BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000610
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275216.1| PREDICTED: translocon-associated protein sub...   326   7e-87
ref|XP_002529245.1| translocon-associated protein, alpha subunit...   316   1e-83
gb|ACV70142.1| putative translocon-associated protein alpha subu...   308   2e-81
ref|XP_003607276.1| Translocon-associated protein subunit alpha ...   302   1e-79
ref|NP_001239981.1| uncharacterized protein LOC100820543 precurs...   301   2e-79

>ref|XP_002275216.1| PREDICTED: translocon-associated protein subunit alpha [Vitis
            vinifera] gi|147821778|emb|CAN77171.1| hypothetical
            protein VITISV_029842 [Vitis vinifera]
            gi|297744658|emb|CBI37920.3| unnamed protein product
            [Vitis vinifera]
          Length = 253

 Score =  326 bits (836), Expect = 7e-87
 Identities = 170/253 (67%), Positives = 193/253 (76%), Gaps = 4/253 (1%)
 Frame = -3

Query: 1175 MSIRXXXXXXXXXASPFLQVVRCXXXXXXXXXXXXE--LGIVDDGVQDFAD--FTPAPGI 1008
            M+IR          SPFLQV RC               LGIV +  QDF D  F+PAPG+
Sbjct: 1    MAIRVFFLAFLLLCSPFLQVARCQSEVEVSEAAEEGGDLGIVGEDAQDFGDGSFSPAPGV 60

Query: 1007 DTVTVFPKNSARIVPAGEEAELLVGLNNDGESTVNVIAIKASLHLPFDHRLLVQNLTVQE 828
            DTV VFPKNSAR+V AGEEAELLVG+ NDGES++NVIA+KAS+HLPF+H+LLVQNL+ Q 
Sbjct: 61   DTVCVFPKNSARLVTAGEEAELLVGMKNDGESSLNVIAVKASVHLPFNHQLLVQNLSTQG 120

Query: 827  FNNATVPLSAQATFPYIFGVSKFLQPGTFDLVGTIIYEIDQTPHQSVFYNGTIEVVEASG 648
            FNNA+VP SAQATFPYIF VSK+LQPGTFDLVGTI+YEIDQ P+QSVFYNGTIEVVEA G
Sbjct: 121  FNNASVPASAQATFPYIFAVSKYLQPGTFDLVGTIVYEIDQHPYQSVFYNGTIEVVEAGG 180

Query: 647  FISIESXXXXXXXXXXXXXXXLWIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTA 468
            F+SIES               +WI GQIQNLSKKTKR+PKVEVGTGTTDAS+DEWLQGTA
Sbjct: 181  FVSIESVFLVFLGIALLVFFGVWIRGQIQNLSKKTKRAPKVEVGTGTTDASLDEWLQGTA 240

Query: 467  YAQAASNKLKKKK 429
            Y Q+ S+K KKKK
Sbjct: 241  YTQSLSSKSKKKK 253


>ref|XP_002529245.1| translocon-associated protein, alpha subunit, putative [Ricinus
            communis] gi|223531281|gb|EEF33123.1|
            translocon-associated protein, alpha subunit, putative
            [Ricinus communis]
          Length = 260

 Score =  316 bits (809), Expect = 1e-83
 Identities = 165/242 (68%), Positives = 187/242 (77%), Gaps = 7/242 (2%)
 Frame = -3

Query: 1133 SPFLQVVRCXXXXXXXXXXXXE----LGIV-DDGVQDFAD--FTPAPGIDTVTVFPKNSA 975
            SP LQV +C            E    LGIV +D   DF D  F+PAPG++TV VFPKNSA
Sbjct: 19   SPLLQVAKCQSDSEAEIAGSGEEVSDLGIVGEDAHDDFGDGSFSPAPGVNTVCVFPKNSA 78

Query: 974  RIVPAGEEAELLVGLNNDGESTVNVIAIKASLHLPFDHRLLVQNLTVQEFNNATVPLSAQ 795
            R+VPAGEE E+LVG+ NDG+S++NVIA+KAS+HLPFDHRLLVQNLT Q FNNATVP SAQ
Sbjct: 79   RVVPAGEETEVLVGVKNDGDSSINVIAVKASVHLPFDHRLLVQNLTAQAFNNATVPASAQ 138

Query: 794  ATFPYIFGVSKFLQPGTFDLVGTIIYEIDQTPHQSVFYNGTIEVVEASGFISIESXXXXX 615
            ATFPYIF VSK+LQPG+FDLVGTIIYEIDQ P+QS FYNGTIEVVE+ GF+SIES     
Sbjct: 139  ATFPYIFAVSKYLQPGSFDLVGTIIYEIDQHPYQSTFYNGTIEVVESGGFLSIESVFLVT 198

Query: 614  XXXXXXXXXXLWIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKK 435
                      LWI+GQIQNLSKKTKR+PKVEVGTGT D S+DEWLQGTAY Q+ SNK KK
Sbjct: 199  LGIALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTGTRDVSLDEWLQGTAYTQSLSNKSKK 258

Query: 434  KK 429
            KK
Sbjct: 259  KK 260


>gb|ACV70142.1| putative translocon-associated protein alpha subunit [Jatropha
            curcas]
          Length = 257

 Score =  308 bits (790), Expect = 2e-81
 Identities = 162/242 (66%), Positives = 183/242 (75%), Gaps = 7/242 (2%)
 Frame = -3

Query: 1133 SPFLQVVRCXXXXXXXXXXXXE----LGIVDDGVQDFAD--FTPAPGIDTVTVFPKNSAR 972
            SP LQV RC            E    LGIV +  QDF D  F+PAPG++TV VFPKNSAR
Sbjct: 16   SPLLQVARCQSDSDVEVTDAAEEVSDLGIVGEDAQDFGDGTFSPAPGVETVCVFPKNSAR 75

Query: 971  IVPAGEEAELLVGLNNDGESTVNVIAIKASLHLPFDHRLLVQNLTVQEFNNATVPLSAQA 792
            +VPAGEEAELLVG+ NDGES++N+ A+KAS+HLPFDHRLLVQNLT Q FNNATVP S QA
Sbjct: 76   VVPAGEEAELLVGIKNDGESSINITAVKASVHLPFDHRLLVQNLTAQAFNNATVPPSTQA 135

Query: 791  TFPY-IFGVSKFLQPGTFDLVGTIIYEIDQTPHQSVFYNGTIEVVEASGFISIESXXXXX 615
            TFP   F VSK+LQPG FDLVG+IIYEIDQ  +QS FYNGTIEVVE+ GF+SIES     
Sbjct: 136  TFPIRFFAVSKYLQPGNFDLVGSIIYEIDQQGYQSTFYNGTIEVVESGGFLSIESVFLVT 195

Query: 614  XXXXXXXXXXLWIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKK 435
                      LWI+GQ+QNLSKKTKR+PKVEVGTGT DASMDEWLQGTAY Q+ S+K KK
Sbjct: 196  LGIALLVLFGLWIHGQVQNLSKKTKRAPKVEVGTGTRDASMDEWLQGTAYTQSLSSKFKK 255

Query: 434  KK 429
            KK
Sbjct: 256  KK 257


>ref|XP_003607276.1| Translocon-associated protein subunit alpha [Medicago truncatula]
            gi|355508331|gb|AES89473.1| Translocon-associated protein
            subunit alpha [Medicago truncatula]
          Length = 256

 Score =  302 bits (773), Expect = 1e-79
 Identities = 153/238 (64%), Positives = 182/238 (76%), Gaps = 3/238 (1%)
 Frame = -3

Query: 1133 SPFLQVVRCXXXXXXXXXXXXELGIVDDGVQDF---ADFTPAPGIDTVTVFPKNSARIVP 963
            SPFLQV R             ++G+V +   DF    DF+PAPGIDT++VFPKN A++V 
Sbjct: 19   SPFLQVARSDEGVDTTTEEGSDIGVVGEEAPDFDSIGDFSPAPGIDTISVFPKNFAKLVT 78

Query: 962  AGEEAELLVGLNNDGESTVNVIAIKASLHLPFDHRLLVQNLTVQEFNNATVPLSAQATFP 783
            AGE+ ELLVG+ N+G+S++NV+AIKAS+HLP DHRLLVQNLT Q FNN +VP SAQATFP
Sbjct: 79   AGEDTELLVGVKNNGDSSLNVVAIKASVHLPVDHRLLVQNLTAQVFNNGSVPASAQATFP 138

Query: 782  YIFGVSKFLQPGTFDLVGTIIYEIDQTPHQSVFYNGTIEVVEASGFISIESXXXXXXXXX 603
            YIF VSKFLQPG+FDLVGTIIYEID+ P+QS F+NGT+EVVEA G +SIES         
Sbjct: 139  YIFAVSKFLQPGSFDLVGTIIYEIDEQPYQSTFFNGTVEVVEAGGILSIESVFLVTLGVA 198

Query: 602  XXXXXXLWIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKKKK 429
                  LWI+GQIQNLSKKTKR+PKVEVGT +TDAS DEWLQGTAY Q+ S+K KKKK
Sbjct: 199  LLVLLGLWIHGQIQNLSKKTKRAPKVEVGTRSTDASTDEWLQGTAYTQSLSSKSKKKK 256


>ref|NP_001239981.1| uncharacterized protein LOC100820543 precursor [Glycine max]
            gi|255634887|gb|ACU17802.1| unknown [Glycine max]
          Length = 258

 Score =  301 bits (772), Expect = 2e-79
 Identities = 157/240 (65%), Positives = 183/240 (76%), Gaps = 5/240 (2%)
 Frame = -3

Query: 1133 SPFLQVVRCXXXXXXXXXXXXE---LGIVDDGVQDFAD--FTPAPGIDTVTVFPKNSARI 969
            SP LQV RC            E   +GIV D VQDF D  F  APGI+T++VFPKNSAR+
Sbjct: 19   SPLLQVARCQSDSDDVVEAAEESGDIGIVGDDVQDFGDGTFPSAPGIETISVFPKNSARL 78

Query: 968  VPAGEEAELLVGLNNDGESTVNVIAIKASLHLPFDHRLLVQNLTVQEFNNATVPLSAQAT 789
            + AGEE+ELLVG+ NDG+S++NVIAIKAS+HLPFDHR+LVQNLT Q FNN +VP SAQAT
Sbjct: 79   ITAGEESELLVGVKNDGDSSLNVIAIKASVHLPFDHRMLVQNLTAQGFNNGSVPASAQAT 138

Query: 788  FPYIFGVSKFLQPGTFDLVGTIIYEIDQTPHQSVFYNGTIEVVEASGFISIESXXXXXXX 609
            FPY+F VSKFLQ GTFDLVGTIIYEID+ P QS F+NGT+EVVE+  F+S+ES       
Sbjct: 139  FPYLFAVSKFLQSGTFDLVGTIIYEIDEHPFQSTFFNGTVEVVESGAFLSMESVFLVTLG 198

Query: 608  XXXXXXXXLWIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKKKK 429
                    LWI+GQIQ+LSKKTKR+PKVEVGT TTDAS DEWLQGTAY Q+ S+K KKKK
Sbjct: 199  VALLVLLGLWIHGQIQHLSKKTKRAPKVEVGTRTTDASTDEWLQGTAYTQSMSSKSKKKK 258