BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000607
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   351   7e-95
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   340   1e-91
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...   340   2e-91
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   333   2e-89
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...   333   2e-89

>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  351 bits (900), Expect = 7e-95
 Identities = 168/208 (80%), Positives = 183/208 (87%)
 Frame = +2

Query: 2   GGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVHKGLS 181
           GGLGLVGQPDKARD+L EM EYGCYPD AAYNAVIRN+CIAKR+ DA NLMDEM  KGLS
Sbjct: 285 GGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLS 344

Query: 182 PNATTYNLFFRIFYWSNDLGSSWNLYERMMDAGCLPNTQSCMFLIRLFKKQEKVQMALVL 361
           PNATTYNLFFR+FYWSNDL +SW+LY RMM++GCLPNTQSCMFLIRLF+K EKV+MAL L
Sbjct: 345 PNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTL 404

Query: 362 WKDMVEKGFGSYILVSDVLFDLLCDLGKLEEAENCFLQMAEKGHKPSNVSFRRIKVLMEL 541
           W DMVEKGFGSYILVSDVLFDLLCD+GKL EAE CFLQM EKGHKPSNVSFRRIKVLMEL
Sbjct: 405 WNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRRIKVLMEL 464

Query: 542 ANRHEALKILSKKMGIFGPIVQERDRIE 625
            N+H+AL  L KKM IFG  +Q  +R E
Sbjct: 465 VNKHDALLNLQKKMAIFGSSIQLPEREE 492


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  340 bits (872), Expect = 1e-91
 Identities = 165/208 (79%), Positives = 179/208 (86%)
 Frame = +2

Query: 2   GGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVHKGLS 181
           GGLGLVGQPDKARDVLKEM EYGCYPD AAYNA IRNFCIA R+ DA  LMDEMV KGLS
Sbjct: 306 GGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLS 365

Query: 182 PNATTYNLFFRIFYWSNDLGSSWNLYERMMDAGCLPNTQSCMFLIRLFKKQEKVQMALVL 361
           PNATTYNLFFR FYWSNDLG S  LY+RM   GCLPNTQSCMFL RLF++QEKV+MAL L
Sbjct: 366 PNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVEMALEL 425

Query: 362 WKDMVEKGFGSYILVSDVLFDLLCDLGKLEEAENCFLQMAEKGHKPSNVSFRRIKVLMEL 541
           W DMVEKGFGSYILVSDVLFD+LCD+GKL E E C LQM EKGHKPSNVSFRRIKVLMEL
Sbjct: 426 WNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSFRRIKVLMEL 485

Query: 542 ANRHEALKILSKKMGIFGPIVQERDRIE 625
           AN+HEAL+ L++KM +FGP  Q ++R E
Sbjct: 486 ANKHEALQNLTEKMAMFGPSTQVQERAE 513


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score =  340 bits (871), Expect = 2e-91
 Identities = 162/202 (80%), Positives = 181/202 (89%)
 Frame = +2

Query: 2   GGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVHKGLS 181
           GGLGL+GQPDKAR+VLKEM EYGCYPDAAAYNA IRNFCIAKR+ DA+ L++EMV KGLS
Sbjct: 280 GGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLS 339

Query: 182 PNATTYNLFFRIFYWSNDLGSSWNLYERMMDAGCLPNTQSCMFLIRLFKKQEKVQMALVL 361
           PNATTYNLFFR+FYWSNDL SSWN+Y+RMM  GCLPNTQSCMFLIRLF++ EKV+MAL  
Sbjct: 340 PNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVEMALQF 399

Query: 362 WKDMVEKGFGSYILVSDVLFDLLCDLGKLEEAENCFLQMAEKGHKPSNVSFRRIKVLMEL 541
           W DMVEKGFGSY LVSDVLFDLLCD+GKLEEAE CFL+M EKG KPS+VSFRRIKVLMEL
Sbjct: 400 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMEL 459

Query: 542 ANRHEALKILSKKMGIFGPIVQ 607
           ANRHEAL+ L +KM +FG  +Q
Sbjct: 460 ANRHEALQSLMQKMAMFGRPLQ 481


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  333 bits (854), Expect = 2e-89
 Identities = 156/194 (80%), Positives = 177/194 (91%)
 Frame = +2

Query: 2   GGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVHKGLS 181
           GGLGLVGQPDKAR++LKEM EYGCYPD AAYNA IRNFCIAKR+ +A++L+DEMV+KGLS
Sbjct: 288 GGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLS 347

Query: 182 PNATTYNLFFRIFYWSNDLGSSWNLYERMMDAGCLPNTQSCMFLIRLFKKQEKVQMALVL 361
           PNATTYNLFFRIF+WSNDL S+WNLY RMMD GCLPNTQSC+FL+RLFKK EK +MAL L
Sbjct: 348 PNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALEL 407

Query: 362 WKDMVEKGFGSYILVSDVLFDLLCDLGKLEEAENCFLQMAEKGHKPSNVSFRRIKVLMEL 541
           W DM++KGFGSYILVS+ LFDLLCDLGKL EAE+CFLQM +KGHKPS  SF+RIKVLMEL
Sbjct: 408 WNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLMEL 467

Query: 542 ANRHEALKILSKKM 583
           AN+HEAL+ LSKKM
Sbjct: 468 ANKHEALQNLSKKM 481


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  333 bits (854), Expect = 2e-89
 Identities = 156/194 (80%), Positives = 177/194 (91%)
 Frame = +2

Query: 2   GGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVHKGLS 181
           GGLGLVGQPDKAR++LKEM EYGCYPD AAYNA IRNFCIAKR+ +A++L+DEMV+KGLS
Sbjct: 288 GGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLS 347

Query: 182 PNATTYNLFFRIFYWSNDLGSSWNLYERMMDAGCLPNTQSCMFLIRLFKKQEKVQMALVL 361
           PNATTYNLFFRIF+WSNDL S+WNLY RMMD GCLPNTQSC+FL+RLFKK EK +MAL L
Sbjct: 348 PNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALEL 407

Query: 362 WKDMVEKGFGSYILVSDVLFDLLCDLGKLEEAENCFLQMAEKGHKPSNVSFRRIKVLMEL 541
           W DM++KGFGSYILVS+ LFDLLCDLGKL EAE+CFLQM +KGHKPS  SF+RIKVLMEL
Sbjct: 408 WNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLMEL 467

Query: 542 ANRHEALKILSKKM 583
           AN+HEAL+ LSKKM
Sbjct: 468 ANKHEALQNLSKKM 481