BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000605
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
gb|AFK45366.1| unknown [Lotus japonicus]                              370   e-100
ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus ...   370   e-100
ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   370   e-100
ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   369   e-100

>ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  373 bits (958), Expect = e-101
 Identities = 183/221 (82%), Positives = 198/221 (89%)
 Frame = +2

Query: 281 SMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRV 460
           SMEAG+GVMGTKLGMMTYFE            FREGNIVTQIKT+ATDGYD+VQVGYRRV
Sbjct: 2   SMEAGVGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRV 61

Query: 461 RDKKLTMPEMGHLNKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVSGTTI 640
           RDKKLT PEMGHL K G IPMRHLQEFRL  ++GFE  Q+L+ +++FKEGDLVDVSGTTI
Sbjct: 62  RDKKLTKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTI 121

Query: 641 GKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL 820
           GKGFQGGIKR NFKRGPMSHGSKSHRA+GSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL
Sbjct: 122 GKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL 181

Query: 821 RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 943
           +IVKID DLR+VMI+GALPGKPGNLLRIAPAKIVGKNIPK+
Sbjct: 182 KIVKIDNDLRVVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 222


>gb|AFK45366.1| unknown [Lotus japonicus]
          Length = 268

 Score =  370 bits (951), Expect = e-100
 Identities = 180/225 (80%), Positives = 198/225 (88%)
 Frame = +2

Query: 269 VTHSSMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVG 448
           V   SMEAG+GVMGTKLGMM+YFE            F+EGNIVTQ+KTEATDGYD+VQVG
Sbjct: 44  VVMMSMEAGVGVMGTKLGMMSYFEENGVVVPVTVVGFKEGNIVTQLKTEATDGYDAVQVG 103

Query: 449 YRRVRDKKLTMPEMGHLNKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVS 628
           Y+R+RD+KLT PE+GHL KVGAIPMRHLQEFRL S+EGF+ NQRLV  ++FKEGDLVDVS
Sbjct: 104 YQRIRDRKLTKPELGHLEKVGAIPMRHLQEFRLQSLEGFDLNQRLVFDELFKEGDLVDVS 163

Query: 629 GTTIGKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTK 808
           GTTIGKGFQGGIKRWNFKRGPMSHG KSHR +GSIGAGTTPGRVY GKKMPGRMGGTK K
Sbjct: 164 GTTIGKGFQGGIKRWNFKRGPMSHGFKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKRK 223

Query: 809 IRKLRIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 943
           IRKL+IVKID+DL +VMI+GALPGKPGNLLRI PAKIVGKNIPKN
Sbjct: 224 IRKLKIVKIDKDLNVVMIKGALPGKPGNLLRITPAKIVGKNIPKN 268


>ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
           gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 285

 Score =  370 bits (951), Expect = e-100
 Identities = 184/236 (77%), Positives = 203/236 (86%), Gaps = 1/236 (0%)
 Frame = +2

Query: 239 CSNPMRARRM-VTHSSMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTE 415
           C+N  +   + +   SMEAGIGVMGTKLGMM+YFE            FREGNIVTQIKTE
Sbjct: 50  CTNGTKTSGLSIVAMSMEAGIGVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTE 109

Query: 416 ATDGYDSVQVGYRRVRDKKLTMPEMGHLNKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKD 595
           ATDGYDSVQVGYRR+RD+KLT PE+GHL K G IPMRHLQEFRL +++GFE  Q+LV+++
Sbjct: 110 ATDGYDSVQVGYRRIRDRKLTKPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEE 169

Query: 596 IFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKK 775
           IFKEGDLVDVSG TIGKGFQGGIKR NFKRG M+HGSKSHRA+GSIGAGTTPGRVYKGKK
Sbjct: 170 IFKEGDLVDVSGITIGKGFQGGIKRHNFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKK 229

Query: 776 MPGRMGGTKTKIRKLRIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 943
           MPGRMGGTKTKIRKL+IVKID DLR VMI+GALPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 230 MPGRMGGTKTKIRKLKIVKIDNDLRAVMIKGALPGKPGNLLRIAPAKIVGKNIPKN 285


>ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Vitis
           vinifera]
          Length = 281

 Score =  370 bits (950), Expect = e-100
 Identities = 179/225 (79%), Positives = 197/225 (87%)
 Frame = +2

Query: 269 VTHSSMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVG 448
           +   SMEAG+GVM TKLGMM+YFE            FREGNIVTQ+KTEATDGY +VQVG
Sbjct: 57  IIRMSMEAGVGVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVG 116

Query: 449 YRRVRDKKLTMPEMGHLNKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVS 628
           YRRVRD+KLT PEMGHL K G IPMRHLQEFRL SV+GFEPNQ+LV +++FKEGDLVDVS
Sbjct: 117 YRRVRDRKLTKPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVS 176

Query: 629 GTTIGKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTK 808
           G TIGKGFQGGIKR NF+RGPM+HGSKSHRA+GSIGAGTTPG VYKGKKMPGRMGGTKTK
Sbjct: 177 GITIGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTK 236

Query: 809 IRKLRIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 943
           IRKL+IVKID DLR+VMI+GA+PGKPGNLLRI PAKIVGKNIPKN
Sbjct: 237 IRKLKIVKIDNDLRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 281


>ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine
           max]
          Length = 263

 Score =  369 bits (948), Expect = e-100
 Identities = 181/221 (81%), Positives = 198/221 (89%)
 Frame = +2

Query: 281 SMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRV 460
           SMEAGIGVMGTKLGMM+YFE            F+EGNIVTQIKTEATDGYD+VQVGYRRV
Sbjct: 43  SMEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRV 102

Query: 461 RDKKLTMPEMGHLNKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVSGTTI 640
           RD+KLT PE+GHL KVGAIPMRHLQEFRL +++GF+ NQRLV  +IFKEGDLVDVSGTTI
Sbjct: 103 RDRKLTKPEIGHLQKVGAIPMRHLQEFRLQAIDGFDLNQRLVFDEIFKEGDLVDVSGTTI 162

Query: 641 GKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL 820
           GKGFQGGIKR NFKRGPM+HGSKSHR +GSIGAGTTPGRVYKGKKMPGRMGGTK KIRKL
Sbjct: 163 GKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL 222

Query: 821 RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 943
           +IVKID+DL +VMI+GA+PGKPGNLLRI PAKIVGKNIPKN
Sbjct: 223 KIVKIDKDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 263