BLASTX nr result

ID: Coptis24_contig00000604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000604
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278162.1| PREDICTED: proteasome subunit alpha type-7 [...   429   e-118
ref|XP_002264052.1| PREDICTED: proteasome subunit alpha type-7 [...   427   e-117
ref|XP_004134855.1| PREDICTED: proteasome subunit alpha type-7-l...   424   e-116
gb|ABB86280.1| proteasome-like protein alpha subunit-like [Solan...   423   e-116
gb|ABB16990.1| proteasome-like protein alpha subunit [Solanum tu...   423   e-116

>ref|XP_002278162.1| PREDICTED: proteasome subunit alpha type-7 [Vitis vinifera]
           gi|297744621|emb|CBI37883.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  429 bits (1104), Expect = e-118
 Identities = 216/225 (96%), Positives = 222/225 (98%)
 Frame = +2

Query: 89  YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGLDTIVLGVEKKSAAKLQDSRSVRKI 268
           YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRG DTIVLGVEKKS AKLQDSR+VRKI
Sbjct: 4   YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDSRTVRKI 63

Query: 269 VNLDDHIALACAGLKADARVLINKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 448
           VNLDDHIALACAGLKADARVLIN+ARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG
Sbjct: 64  VNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 123

Query: 449 GVRPFGLSTLIVGFDPYTGVPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSG 628
           GVRPFGLSTLI+GFDPYTGVP+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK+TSG
Sbjct: 124 GVRPFGLSTLIIGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG 183

Query: 629 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDTIV 763
           QETVKLAIRALLEVVESGGKNIE+AVMTKEHGLRQLEEAEID IV
Sbjct: 184 QETVKLAIRALLEVVESGGKNIEIAVMTKEHGLRQLEEAEIDAIV 228


>ref|XP_002264052.1| PREDICTED: proteasome subunit alpha type-7 [Vitis vinifera]
           gi|297734987|emb|CBI17349.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  427 bits (1099), Expect = e-117
 Identities = 215/225 (95%), Positives = 222/225 (98%)
 Frame = +2

Query: 89  YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGLDTIVLGVEKKSAAKLQDSRSVRKI 268
           YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRG DTIVLGVEKKS AKLQDSR+VRKI
Sbjct: 4   YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDSRTVRKI 63

Query: 269 VNLDDHIALACAGLKADARVLINKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 448
           VNLDDHIALACAGLKADARVLIN+ARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG
Sbjct: 64  VNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 123

Query: 449 GVRPFGLSTLIVGFDPYTGVPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSG 628
           GVRPFGLSTLIVGFDPYTGVP+LYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK+TSG
Sbjct: 124 GVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSG 183

Query: 629 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDTIV 763
           QETVKLAIRALLEVVESGGKNIE+AVMT+EHGLRQL+EAEID IV
Sbjct: 184 QETVKLAIRALLEVVESGGKNIEIAVMTREHGLRQLDEAEIDAIV 228


>ref|XP_004134855.1| PREDICTED: proteasome subunit alpha type-7-like [Cucumis sativus]
           gi|449491326|ref|XP_004158862.1| PREDICTED: proteasome
           subunit alpha type-7-like [Cucumis sativus]
          Length = 249

 Score =  424 bits (1090), Expect = e-116
 Identities = 213/225 (94%), Positives = 220/225 (97%)
 Frame = +2

Query: 89  YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGLDTIVLGVEKKSAAKLQDSRSVRKI 268
           YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRG DTIVLGVEKK+  KLQDSRSVRKI
Sbjct: 4   YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKATPKLQDSRSVRKI 63

Query: 269 VNLDDHIALACAGLKADARVLINKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 448
           VNLDDHIALACAGLKADARVLIN+ARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG
Sbjct: 64  VNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 123

Query: 449 GVRPFGLSTLIVGFDPYTGVPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSG 628
           GVRPFGLSTLI+GFDPYTG P+LYQTDPSGTFSAWKANATGRNSNS+REFLEKNYK+TSG
Sbjct: 124 GVRPFGLSTLIIGFDPYTGAPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSG 183

Query: 629 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDTIV 763
           QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEID +V
Sbjct: 184 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDALV 228


>gb|ABB86280.1| proteasome-like protein alpha subunit-like [Solanum tuberosum]
          Length = 249

 Score =  423 bits (1088), Expect = e-116
 Identities = 212/225 (94%), Positives = 220/225 (97%)
 Frame = +2

Query: 89  YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGLDTIVLGVEKKSAAKLQDSRSVRKI 268
           YDRAITVFSPDGHLFQVEYA+EAVRKGNAAVGVRG DT+VLGVEKKS  KLQDSRSVRKI
Sbjct: 4   YDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKI 63

Query: 269 VNLDDHIALACAGLKADARVLINKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 448
           VNLDDHIALACAGLKADARVL+NKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG
Sbjct: 64  VNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 123

Query: 449 GVRPFGLSTLIVGFDPYTGVPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSG 628
           GVRPFGLSTLI+GFDP+TGVP+LYQTDPSGTFSAWKANATGRNSNS REFLEKNYK+TSG
Sbjct: 124 GVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSG 183

Query: 629 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDTIV 763
           QETVKLAIRALLEVVESGGKNIEVAVMTKEHGL+QLEEAEID IV
Sbjct: 184 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLKQLEEAEIDAIV 228


>gb|ABB16990.1| proteasome-like protein alpha subunit [Solanum tuberosum]
          Length = 249

 Score =  423 bits (1088), Expect = e-116
 Identities = 212/225 (94%), Positives = 220/225 (97%)
 Frame = +2

Query: 89  YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGLDTIVLGVEKKSAAKLQDSRSVRKI 268
           YDRAITVFSPDGHLFQVEYA+EAVRKGNAAVGVRG DT+VLGVEKKS  KLQDSRSVRKI
Sbjct: 4   YDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKI 63

Query: 269 VNLDDHIALACAGLKADARVLINKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 448
           VNLDDHIALACAGLKADARVL+NKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG
Sbjct: 64  VNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 123

Query: 449 GVRPFGLSTLIVGFDPYTGVPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSG 628
           GVRPFGLSTLI+GFDP+TGVP+LYQTDPSGTFSAWKANATGRNSNS REFLEKNYK+TSG
Sbjct: 124 GVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSG 183

Query: 629 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDTIV 763
           QETVKLAIRALLEVVESGGKNIEVAVMTKEHGL+QLEEAEID IV
Sbjct: 184 QETVKLAIRALLEVVESGGKNIEVAVMTKEHGLKQLEEAEIDAIV 228


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