BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000603
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, I...   160   1e-37
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...   160   1e-37
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...   160   1e-37
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Glycine max]
          Length = 142

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/78 (100%), Positives = 78/78 (100%)
 Frame = -2

Query: 546 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 367
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 65  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 124

Query: 366 GVDELIVEDSWKRQVGGD 313
           GVDELIVEDSWKRQVGGD
Sbjct: 125 GVDELIVEDSWKRQVGGD 142


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/78 (100%), Positives = 78/78 (100%)
 Frame = -2

Query: 546 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 367
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 65  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 124

Query: 366 GVDELIVEDSWKRQVGGD 313
           GVDELIVEDSWKRQVGGD
Sbjct: 125 GVDELIVEDSWKRQVGGD 142


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/78 (100%), Positives = 78/78 (100%)
 Frame = -2

Query: 546 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 367
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 47  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 106

Query: 366 GVDELIVEDSWKRQVGGD 313
           GVDELIVEDSWKRQVGGD
Sbjct: 107 GVDELIVEDSWKRQVGGD 124


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/78 (100%), Positives = 78/78 (100%)
 Frame = -2

Query: 546 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 367
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 66  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 125

Query: 366 GVDELIVEDSWKRQVGGD 313
           GVDELIVEDSWKRQVGGD
Sbjct: 126 GVDELIVEDSWKRQVGGD 143


>ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|222858913|gb|EEE96460.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/78 (100%), Positives = 78/78 (100%)
 Frame = -2

Query: 546 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 367
           KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Sbjct: 66  KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 125

Query: 366 GVDELIVEDSWKRQVGGD 313
           GVDELIVEDSWKRQVGGD
Sbjct: 126 GVDELIVEDSWKRQVGGD 143