BLASTX nr result

ID: Coptis24_contig00000592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000592
         (1695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22...   667   0.0  
gb|AFY26883.1| F-box family protein [Morella rubra]                   637   e-180
ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22...   615   e-173
ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22...   607   e-171
ref|XP_003526599.1| PREDICTED: F-box/kelch-repeat protein At1g22...   605   e-170

>ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22040 [Vitis vinifera]
          Length = 477

 Score =  667 bits (1720), Expect = 0.0
 Identities = 330/477 (69%), Positives = 381/477 (79%), Gaps = 20/477 (4%)
 Frame = +2

Query: 194  MGGILS----KSGTGEYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 361
            MG  LS    KS T E++E  Q  +CKRQRMS   +E+NPRLIP+LPDEISI ILARLPR
Sbjct: 1    MGSFLSLAGPKSRTSEHDEGSQHETCKRQRMSSSFNEENPRLIPSLPDEISILILARLPR 60

Query: 362  IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 541
            I Y +++LVSR+WK  +T  ELF+LRKELG TEEWLYILTKVEED+LLWHA DPLS++WQ
Sbjct: 61   ICYFDLRLVSRNWKATITSPELFNLRKELGKTEEWLYILTKVEEDRLLWHALDPLSRRWQ 120

Query: 542  RLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGAV 685
            RLP MP V   EE RKV +GL            ADVIR WLGR+D LD++P+CGCAIGAV
Sbjct: 121  RLPSMPNVVYEEESRKVSSGLWMWNMVGPSIKIADVIRGWLGRKDTLDQMPFCGCAIGAV 180

Query: 686  DGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXX 865
            DGCLYVLGGFS AS ++CVW F+PILN WSEV  MS GRAYCKTG+L +KLY        
Sbjct: 181  DGCLYVLGGFSSASTMRCVWRFDPILNAWSEVTPMSTGRAYCKTGILNDKLYVVGGVSRG 240

Query: 866  XXXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVP 1045
               LTPLQSAEV+DPCT  WS++PSMPFS+AQ+LPTAFLADMLKPIATGMT+Y GRLCVP
Sbjct: 241  RGGLTPLQSAEVFDPCTDTWSQIPSMPFSRAQVLPTAFLADMLKPIATGMTSYMGRLCVP 300

Query: 1046 QSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSS 1225
            QSLYSWPFFVDVGGE+YDPE+N+W+EMP GMGDGWPARQAGTKLSVVV+ ELYA DPSSS
Sbjct: 301  QSLYSWPFFVDVGGEIYDPETNSWVEMPIGMGDGWPARQAGTKLSVVVDGELYAFDPSSS 360

Query: 1226 LDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQA 1405
            LDSG IK+Y  ++DAWKVV+GKVPI DFTDSESPYLLAGF G+LH+ITKD NHD+ VLQA
Sbjct: 361  LDSGNIKVYDQKEDAWKVVIGKVPICDFTDSESPYLLAGFHGKLHIITKDANHDIAVLQA 420

Query: 1406 DPHNR----SSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 1564
            D  +      S++P+    S  E SD L E+ET +WKVIAT +FG+AELVSCQVLDI
Sbjct: 421  DLRDNLGFPPSTSPSCSAASSHEHSDLLAETETVVWKVIATRDFGTAELVSCQVLDI 477


>gb|AFY26883.1| F-box family protein [Morella rubra]
          Length = 473

 Score =  637 bits (1642), Expect = e-180
 Identities = 309/473 (65%), Positives = 370/473 (78%), Gaps = 16/473 (3%)
 Frame = +2

Query: 194  MGGILSKSG----TGEYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 361
            MG  LS  G    TG+Y ++ Q+ +CKRQRMS    E++ RLIP+LPDE+S+QI+ARLPR
Sbjct: 1    MGQFLSLGGQKCRTGDYTKVSQNDTCKRQRMSSSFTEESARLIPSLPDELSMQIIARLPR 60

Query: 362  IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 541
            I+Y +V+LVSR W   V   ELF LR+EL  TEEWLY+LTKVEEDKL WHA DPLS+KWQ
Sbjct: 61   IHYFDVRLVSRKWMATVMSPELFKLRRELRKTEEWLYLLTKVEEDKLSWHALDPLSRKWQ 120

Query: 542  RLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIGAV 685
            RLP +P V   +E RK  +GL            A+V+R WLGR+D LD++P+CGCAIGAV
Sbjct: 121  RLPMIPHVVYEDESRKGFSGLWMWNMAGPSVNIAEVVRRWLGRKDSLDQMPFCGCAIGAV 180

Query: 686  DGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXX 865
            DGCLYVLGGF RA  +KCVW F+PI N WSEV SMS GRAYCKTG+L NKLY        
Sbjct: 181  DGCLYVLGGFCRALTMKCVWKFDPIKNDWSEVTSMSTGRAYCKTGILNNKLYVVGGVSQG 240

Query: 866  XXXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVP 1045
               LTPLQSAEV+DP TG WS+VP+MPFSKAQ LPTAFLADMLKPIATG+T Y GRLCVP
Sbjct: 241  RGSLTPLQSAEVFDPSTGSWSQVPNMPFSKAQALPTAFLADMLKPIATGLTPYMGRLCVP 300

Query: 1046 QSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSS 1225
            QSLYSWPFFVDVGGE+YDPE+N+W+EMP+GMG+GWPARQAGTKLSVVV+ ELYA DPSSS
Sbjct: 301  QSLYSWPFFVDVGGEIYDPETNSWIEMPNGMGEGWPARQAGTKLSVVVDGELYAFDPSSS 360

Query: 1226 LDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQA 1405
            +DSGKIK+Y  ++DAWKVV+GKVP++DF D+ESPYLLAGF G+LHVITKD +H + VLQA
Sbjct: 361  MDSGKIKVYDRKEDAWKVVIGKVPMHDFADTESPYLLAGFHGKLHVITKDSSHHIAVLQA 420

Query: 1406 DPHNRSSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 1564
            D  +  SS+ +    SL E S S+ ES+  +W+VI T +FG AE+VSCQVL+I
Sbjct: 421  DSCSSPSSSSSLFAGSLNENSGSMAESDAVVWRVIGTRDFGPAEMVSCQVLEI 473


>ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Vitis vinifera]
          Length = 479

 Score =  615 bits (1585), Expect = e-173
 Identities = 305/479 (63%), Positives = 369/479 (77%), Gaps = 22/479 (4%)
 Frame = +2

Query: 194  MGGILSKSGTG----EYNEILQSASCKRQRMSCIPDEDNP--RLIPNLPDEISIQILARL 355
            MG  LS +G+     E++E+    +CKRQR+S    E+N   RLIPNLPDEIS QILAR+
Sbjct: 1    MGSALSLNGSKTRFEEHSEVSVDETCKRQRLSSSISEENENVRLIPNLPDEISFQILARV 60

Query: 356  PRIYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKK 535
            PRI+YLNV+LVSRSWK A+  TELF+LRKELG TEEWLYILTK+++DKLLW++ DPLS++
Sbjct: 61   PRIFYLNVRLVSRSWKGAIMSTELFNLRKELGTTEEWLYILTKIKDDKLLWYSLDPLSRR 120

Query: 536  WQRLPPMPPVAKGEEPRKVLAGL------------ADVIRNWLGRRDPLDRLPYCGCAIG 679
            WQRLPPMP VA  +  RK  +GL            ADVIR WLGRRD LDR+P+CG AIG
Sbjct: 121  WQRLPPMPNVAHEDGYRKGFSGLRMLNMVGSSNKIADVIRGWLGRRDELDRIPFCGSAIG 180

Query: 680  AVDGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXX 859
             VDGCLYVLGGFSRASA+  VW ++P+ N WSEV  MSIGRAYCKTGVL NKLY      
Sbjct: 181  TVDGCLYVLGGFSRASALTSVWRYDPVQNGWSEVSPMSIGRAYCKTGVLNNKLYVVGGVT 240

Query: 860  XXXXXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLC 1039
                 L PLQSAEV+DP TG+WS++PSMPF+KAQ+LPTAFLAD+LKPIATGMT+Y+G+L 
Sbjct: 241  RGRGGLIPLQSAEVFDPRTGVWSQIPSMPFAKAQVLPTAFLADLLKPIATGMTSYKGKLF 300

Query: 1040 VPQSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPS 1219
            VPQSLY WPFFVDVGGEVYDPE+N+W EMP GMG+GWPARQAGTKL  +V++ELYALDPS
Sbjct: 301  VPQSLYYWPFFVDVGGEVYDPETNSWFEMPVGMGEGWPARQAGTKLGAIVDDELYALDPS 360

Query: 1220 SSLDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVL 1399
            SS D   IK+Y ++ D+WKVV   VPI+DF ++ESPYLLA  LG+LHVITKD N++  VL
Sbjct: 361  SSADIATIKVYDYQCDSWKVVSTDVPIHDFAEAESPYLLASLLGKLHVITKDANNNFTVL 420

Query: 1400 QADPHNRSSSAP----APLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLDI 1564
            QA+  N   S P    +PL ++  EQ++S  ESETD+WKVIA  + G+ ELVSCQ+L I
Sbjct: 421  QANMQNHLHSFPLTPLSPLGNNSSEQTESAAESETDVWKVIAARSAGACELVSCQILGI 479


>ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 481

 Score =  607 bits (1566), Expect = e-171
 Identities = 300/481 (62%), Positives = 363/481 (75%), Gaps = 24/481 (4%)
 Frame = +2

Query: 194  MGGIL----SKSGTGEYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 361
            MG IL    SK+   + + +LQ  SCKRQR+S    EDNPRLIP+LPDEISIQILAR+PR
Sbjct: 1    MGNILNLNNSKTRRNDSHGVLQGESCKRQRLSPNSCEDNPRLIPSLPDEISIQILARVPR 60

Query: 362  IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 541
            IYYLN+KLV R+WK     +ELF +RKELG  EEWLYILTKV +DKLLW+A DPLS++WQ
Sbjct: 61   IYYLNLKLVCRAWKETFVSSELFCVRKELGSMEEWLYILTKVNDDKLLWYALDPLSRRWQ 120

Query: 542  RLPPMPPVAKGEEPRKVLAG--------------LADVIRNWLGRRDPLDRLPYCGCAIG 679
            +LPPMP V   +E +K L                + DVI +WLGRRD LD +P+CGC+IG
Sbjct: 121  KLPPMPKVGFEDETKKGLISFPLRMWSMMGSSIRIVDVIMSWLGRRDALDWMPFCGCSIG 180

Query: 680  AVDGCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXX 859
            AVDGC+Y LGGFSRASA+K VW ++PI N W+E   MS+GRAYCKTG+L NKLY      
Sbjct: 181  AVDGCIYALGGFSRASAMKYVWQYDPIKNSWAEASPMSVGRAYCKTGILNNKLYVVGGVT 240

Query: 860  XXXXXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLC 1039
                 L+PLQSAEVYDP TG+WS +PSMPF++AQ+LPTAFLAD+LKPIATGM +Y+GRL 
Sbjct: 241  RGRGGLSPLQSAEVYDPHTGMWSLLPSMPFARAQVLPTAFLADLLKPIATGMASYKGRLF 300

Query: 1040 VPQSLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPS 1219
            VPQSLY WPFFVDVGGEVYDP  N+WLEMP GMG+GWPARQAGTKLSV V+++LYALDPS
Sbjct: 301  VPQSLYCWPFFVDVGGEVYDPNLNSWLEMPIGMGEGWPARQAGTKLSVTVDDDLYALDPS 360

Query: 1220 SSLDSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVL 1399
            +SLDS KIK+Y +E D WKV  G VPI+DFT+SESPYLLAG LG+LHVITKD NH++ VL
Sbjct: 361  NSLDSAKIKVYDYEGDTWKVAAGDVPIHDFTESESPYLLAGLLGKLHVITKDANHNITVL 420

Query: 1400 QADPHNR------SSSAPAPLIDSLGEQSDSLVESETDIWKVIATMNFGSAELVSCQVLD 1561
            QAD  N       S S  +   +S+ E ++S  E++ + WKV+AT +  SAELV+CQ L 
Sbjct: 421  QADMQNEHAESAFSQSILSSPDNSISEDAESSAETQGEFWKVLATRSGRSAELVNCQSLK 480

Query: 1562 I 1564
            I
Sbjct: 481  I 481


>ref|XP_003526599.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 476

 Score =  605 bits (1559), Expect = e-170
 Identities = 298/477 (62%), Positives = 364/477 (76%), Gaps = 20/477 (4%)
 Frame = +2

Query: 194  MGGILSKSGTG----EYNEILQSASCKRQRMSCIPDEDNPRLIPNLPDEISIQILARLPR 361
            MG   S + T     E +EI  + +CKRQRMS   DE+NPRLIPNLPDE+S+QI+ARLPR
Sbjct: 1    MGAFFSVASTKPDQRECSEISPNEACKRQRMSPTVDEENPRLIPNLPDELSLQIIARLPR 60

Query: 362  IYYLNVKLVSRSWKNAVTGTELFDLRKELGITEEWLYILTKVEEDKLLWHAFDPLSKKWQ 541
            I Y NV+LVS+ WK+ +  +EL+ LRKELG TEEWLY+L KV E+ LLW+A DP SK WQ
Sbjct: 61   ICYFNVRLVSKKWKSTIMSSELYKLRKELGTTEEWLYLLVKVGENNLLWYALDPRSKIWQ 120

Query: 542  RLPPMPPVAKGEEPRKVLAGL-----------ADVIRNWLGRRDPLDRLPYCGCAIGAVD 688
            R+P MP     EE +K  + L           A+VIR +LG++D  D +P+CGCAIGAVD
Sbjct: 121  RMPNMPNFVNKEESKKGSSRLWMWNMVEGIRIAEVIRGFLGQKDAFDEMPFCGCAIGAVD 180

Query: 689  GCLYVLGGFSRASAVKCVWCFNPILNMWSEVESMSIGRAYCKTGVLKNKLYXXXXXXXXX 868
            GC+YVLGGFS+AS ++CVW F+PI N WS+V SMS GRAYCKTG+L NKLY         
Sbjct: 181  GCVYVLGGFSKASTMRCVWRFDPIQNTWSKVTSMSAGRAYCKTGILNNKLYVVGGVSQGQ 240

Query: 869  XXLTPLQSAEVYDPCTGLWSEVPSMPFSKAQLLPTAFLADMLKPIATGMTTYRGRLCVPQ 1048
              L PLQSAEV+DP T  WS VPSMPFS+AQ+LP+AFLADMLKPIATG+T+Y GRLCVPQ
Sbjct: 241  AGLVPLQSAEVFDPSTDTWSHVPSMPFSRAQVLPSAFLADMLKPIATGLTSYMGRLCVPQ 300

Query: 1049 SLYSWPFFVDVGGEVYDPESNTWLEMPSGMGDGWPARQAGTKLSVVVEEELYALDPSSSL 1228
            SLYSWPFFVDVGGE+YDPE+N+W+EMP+GMGDGWPARQAGTKLSVVV+ ELYA DPS+S+
Sbjct: 301  SLYSWPFFVDVGGEIYDPETNSWIEMPAGMGDGWPARQAGTKLSVVVDGELYAFDPSNSM 360

Query: 1229 DSGKIKIYSHEDDAWKVVVGKVPINDFTDSESPYLLAGFLGRLHVITKDVNHDVVVLQAD 1408
            DSG+IK+Y   +DAWKVV+GKVPI D  DSESPYLLAGF G+LHVITKD NHD+ VLQA 
Sbjct: 361  DSGRIKVYDQGEDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQAG 420

Query: 1409 PHNRSSSAP--APLIDSLGEQSDSLVESETD---IWKVIATMNFGSAELVSCQVLDI 1564
              +   S+P  + L  S  ++S  L  +E+D   +W+V+A+ +FG AELVSCQV+DI
Sbjct: 421  LRDNLDSSPSLSTLSQSTLQESPELA-AESDAAVVWRVVASRDFGQAELVSCQVIDI 476


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