BLASTX nr result

ID: Coptis24_contig00000588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000588
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34205.1| ATP synthase d chain [Cucumis melo subsp. melo]        285   1e-74
ref|XP_002277452.1| PREDICTED: ATP synthase subunit d, mitochond...   281   1e-73
ref|XP_004142418.1| PREDICTED: ATP synthase subunit d, mitochond...   281   2e-73
ref|XP_002526342.1| ATP synthase D chain, mitochondrial, putativ...   279   7e-73
ref|XP_002529702.1| ATP synthase D chain, mitochondrial, putativ...   279   7e-73

>gb|ADN34205.1| ATP synthase d chain [Cucumis melo subsp. melo]
          Length = 168

 Score =  285 bits (729), Expect = 1e-74
 Identities = 137/150 (91%), Positives = 145/150 (96%)
 Frame = +2

Query: 251 IDWDGMYKLLVSDEARKEFSSLRRAFDEVNNTLQTKFSQEPEPIDWEYYRKGIGSRLVDM 430
           IDWDGM KLLVSDEARKEFSSLRRAF+EVN+ LQTKFSQEPEPIDWEYYRKGIGSRLVDM
Sbjct: 19  IDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDM 78

Query: 431 YKEAYDSIEIPKYVDTVTPQYKPKFEALLVELKEAEQQSLKESERLEKEIVEVRELKSKI 610
           YKEAYDSIEIPK+VDTVTPQYKPKF+ALLVELKEAE++SLKESERLEKEI EVRE+K KI
Sbjct: 79  YKEAYDSIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKI 138

Query: 611 STMTADEYFEKHPELKKKFDDEIRNDYWGY 700
            TMTADEYFEKHPEL+KKFDDEIRNDYWGY
Sbjct: 139 CTMTADEYFEKHPELRKKFDDEIRNDYWGY 168


>ref|XP_002277452.1| PREDICTED: ATP synthase subunit d, mitochondrial [Vitis vinifera]
           gi|147818815|emb|CAN60726.1| hypothetical protein
           VITISV_029118 [Vitis vinifera]
          Length = 168

 Score =  281 bits (720), Expect = 1e-73
 Identities = 133/151 (88%), Positives = 147/151 (97%)
 Frame = +2

Query: 248 TIDWDGMYKLLVSDEARKEFSSLRRAFDEVNNTLQTKFSQEPEPIDWEYYRKGIGSRLVD 427
           TIDWDGM KL+V++EARKEF++LRRAFDEVN+TLQTKFSQEPEPIDWEYYR+GIGSRLVD
Sbjct: 18  TIDWDGMAKLIVTEEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRRGIGSRLVD 77

Query: 428 MYKEAYDSIEIPKYVDTVTPQYKPKFEALLVELKEAEQQSLKESERLEKEIVEVRELKSK 607
           MYKEAY+SI +PKYVDTVTPQYKPKF+ALLVELKEAE++SLKESERLEKEI EV+ELK K
Sbjct: 78  MYKEAYESISVPKYVDTVTPQYKPKFDALLVELKEAEEKSLKESERLEKEIAEVQELKKK 137

Query: 608 ISTMTADEYFEKHPELKKKFDDEIRNDYWGY 700
           ISTMTA+EYFEKHPELKKKFDDEIRNDYWGY
Sbjct: 138 ISTMTANEYFEKHPELKKKFDDEIRNDYWGY 168


>ref|XP_004142418.1| PREDICTED: ATP synthase subunit d, mitochondrial-like [Cucumis
           sativus] gi|449487159|ref|XP_004157514.1| PREDICTED: ATP
           synthase subunit d, mitochondrial-like [Cucumis sativus]
          Length = 168

 Score =  281 bits (718), Expect = 2e-73
 Identities = 135/150 (90%), Positives = 143/150 (95%)
 Frame = +2

Query: 251 IDWDGMYKLLVSDEARKEFSSLRRAFDEVNNTLQTKFSQEPEPIDWEYYRKGIGSRLVDM 430
           IDWDGM KLLVSDEARKEFSSLRRAF+EVN+ LQTKFSQEPEPIDWEYYRKGIGSRLVDM
Sbjct: 19  IDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDM 78

Query: 431 YKEAYDSIEIPKYVDTVTPQYKPKFEALLVELKEAEQQSLKESERLEKEIVEVRELKSKI 610
           YKEAYD IEIPK+VDTVTPQYKPKF+ALLVELKEAE +SLKESERLEKEI EV+E+K KI
Sbjct: 79  YKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEAKSLKESERLEKEIAEVQEMKKKI 138

Query: 611 STMTADEYFEKHPELKKKFDDEIRNDYWGY 700
            TMTADEYFEKHPEL+KKFDDEIRNDYWGY
Sbjct: 139 CTMTADEYFEKHPELRKKFDDEIRNDYWGY 168


>ref|XP_002526342.1| ATP synthase D chain, mitochondrial, putative [Ricinus communis]
           gi|223534301|gb|EEF36013.1| ATP synthase D chain,
           mitochondrial, putative [Ricinus communis]
          Length = 168

 Score =  279 bits (714), Expect = 7e-73
 Identities = 133/150 (88%), Positives = 145/150 (96%)
 Frame = +2

Query: 251 IDWDGMYKLLVSDEARKEFSSLRRAFDEVNNTLQTKFSQEPEPIDWEYYRKGIGSRLVDM 430
           IDWDGM KL+VSDEARKEF+SLRRAF+EVN+ L+TKFSQEPEP+DWEYYRK IGSRLVD+
Sbjct: 19  IDWDGMAKLIVSDEARKEFASLRRAFNEVNSQLETKFSQEPEPVDWEYYRKQIGSRLVDV 78

Query: 431 YKEAYDSIEIPKYVDTVTPQYKPKFEALLVELKEAEQQSLKESERLEKEIVEVRELKSKI 610
           YKEAYDSIEIPKYVDTVTPQYKPKF++LLVELKEAEQ+SLKESERLEKEI EV+ELK K+
Sbjct: 79  YKEAYDSIEIPKYVDTVTPQYKPKFDSLLVELKEAEQKSLKESERLEKEIAEVQELKKKL 138

Query: 611 STMTADEYFEKHPELKKKFDDEIRNDYWGY 700
           STMTADEYFEKHPELKKKFDDEIRNDYWGY
Sbjct: 139 STMTADEYFEKHPELKKKFDDEIRNDYWGY 168


>ref|XP_002529702.1| ATP synthase D chain, mitochondrial, putative [Ricinus communis]
           gi|223530804|gb|EEF32668.1| ATP synthase D chain,
           mitochondrial, putative [Ricinus communis]
          Length = 168

 Score =  279 bits (714), Expect = 7e-73
 Identities = 132/150 (88%), Positives = 145/150 (96%)
 Frame = +2

Query: 251 IDWDGMYKLLVSDEARKEFSSLRRAFDEVNNTLQTKFSQEPEPIDWEYYRKGIGSRLVDM 430
           IDW+GM KLLVSDEARKEF++LRR FDEVN+TLQTKFSQEPEPIDWEYYRKGIGSRLVDM
Sbjct: 19  IDWEGMAKLLVSDEARKEFATLRRTFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDM 78

Query: 431 YKEAYDSIEIPKYVDTVTPQYKPKFEALLVELKEAEQQSLKESERLEKEIVEVRELKSKI 610
           YKEAYDS+EIPK+VDTVTPQYKPKF+ALLVELKEAE++SLKESERLEKEI +V+ELK K+
Sbjct: 79  YKEAYDSVEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKESERLEKEIADVQELKKKL 138

Query: 611 STMTADEYFEKHPELKKKFDDEIRNDYWGY 700
           STMTA+EYF KHPELKKKFDDEIRNDYWGY
Sbjct: 139 STMTAEEYFAKHPELKKKFDDEIRNDYWGY 168


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