BLASTX nr result

ID: Coptis24_contig00000582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000582
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P31853.2|ATPX_SPIOL RecName: Full=ATP synthase subunit b', ch...   198   1e-48
ref|XP_002285183.1| PREDICTED: uncharacterized protein LOC100250...   195   1e-47
emb|CAN81656.1| hypothetical protein VITISV_042594 [Vitis vinifera]   191   2e-46
prf||1917214A CF0 ATP synthase:SUBUNIT=9                              187   4e-45
ref|NP_194953.1| F-type H+-transporting ATPase subunit b [Arabid...   186   5e-45

>sp|P31853.2|ATPX_SPIOL RecName: Full=ATP synthase subunit b', chloroplastic; AltName:
           Full=ATP synthase F(0) sector subunit b'; AltName:
           Full=ATPase subunit II; Flags: Precursor
           gi|394755|emb|CAA50520.1| CF(o)II ATP synthase subunit 9
           [Spinacia oleracea]
          Length = 222

 Score =  198 bits (504), Expect = 1e-48
 Identities = 106/144 (73%), Positives = 117/144 (81%)
 Frame = +1

Query: 322 EIEKAALFDFNLTLPLIMAEFLFLMFALDKIYYSPLGKFMDERDASIKESLNSVKDTSSE 501
           EIEKA+LFDFNLTLP+IMAEFLFLMFALDKIYY+PLG FMD+RDASIKE L+ VKDTSSE
Sbjct: 77  EIEKASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSE 136

Query: 502 VKQLEDEATAIMRAARAEISAALNQMKKETSVEVEAKLAQGRXXXXXXXXXXXXXXXXXX 681
           VKQLE++A A+MRAARAEISAALN+MKKET +EVEAKLA+GR                  
Sbjct: 137 VKQLEEQANAVMRAARAEISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQK 196

Query: 682 XXTIKSLDSQISALSQDIVNKVLP 753
             TIKSLDSQISALS DIV KVLP
Sbjct: 197 EDTIKSLDSQISALSDDIVKKVLP 220


>ref|XP_002285183.1| PREDICTED: uncharacterized protein LOC100250997 [Vitis vinifera]
          Length = 215

 Score =  195 bits (496), Expect = 1e-47
 Identities = 110/187 (58%), Positives = 128/187 (68%)
 Frame = +1

Query: 193 FQLPILKCPKITIISLNSLKSSGXXXXXXXXXXXXXXXXXXXXEIEKAALFDFNLTLPLI 372
           F LP +  P++    L SLKS+                     EIEKAALF+FNLTLP++
Sbjct: 30  FHLPHISLPRLP--KLLSLKSAALIAATTTTSLSLAPLPSMAEEIEKAALFEFNLTLPIM 87

Query: 373 MAEFLFLMFALDKIYYSPLGKFMDERDASIKESLNSVKDTSSEVKQLEDEATAIMRAARA 552
           MA+FL LM ALDKIYYSPLGKFMDER+A+IKE LNSVKDTS EVKQLE++A A+M+A RA
Sbjct: 88  MAQFLLLMVALDKIYYSPLGKFMDERNAAIKEKLNSVKDTSGEVKQLEEQAAAVMKAVRA 147

Query: 553 EISAALNQMKKETSVEVEAKLAQGRXXXXXXXXXXXXXXXXXXXXTIKSLDSQISALSQD 732
           EISAALNQMKKET+ EVE KLA+GR                    TIK+LDSQI+ALSQ 
Sbjct: 148 EISAALNQMKKETAAEVEMKLAEGRKKVEAELQEALAVLEKQKEDTIKALDSQIAALSQQ 207

Query: 733 IVNKVLP 753
           IVNKVLP
Sbjct: 208 IVNKVLP 214


>emb|CAN81656.1| hypothetical protein VITISV_042594 [Vitis vinifera]
          Length = 148

 Score =  191 bits (485), Expect = 2e-46
 Identities = 101/144 (70%), Positives = 115/144 (79%)
 Frame = +1

Query: 322 EIEKAALFDFNLTLPLIMAEFLFLMFALDKIYYSPLGKFMDERDASIKESLNSVKDTSSE 501
           EIEKAALF+FNLTLP++MA+FL LM ALDKIYYSPLGKFMDER+A+IKE LNSVKDTS E
Sbjct: 4   EIEKAALFEFNLTLPIMMAQFLLLMVALDKIYYSPLGKFMDERNAAIKEKLNSVKDTSGE 63

Query: 502 VKQLEDEATAIMRAARAEISAALNQMKKETSVEVEAKLAQGRXXXXXXXXXXXXXXXXXX 681
           VKQLE++A A+M+A RAEISAALNQMKKET+ EVE KLA+GR                  
Sbjct: 64  VKQLEEQAAAVMKAVRAEISAALNQMKKETAAEVEMKLAEGRKKVEAELQEALAVLEKQK 123

Query: 682 XXTIKSLDSQISALSQDIVNKVLP 753
             TIK+LDSQI+ALSQ IVNKVLP
Sbjct: 124 EDTIKALDSQIAALSQQIVNKVLP 147


>prf||1917214A CF0 ATP synthase:SUBUNIT=9
          Length = 222

 Score =  187 bits (474), Expect = 4e-45
 Identities = 102/144 (70%), Positives = 111/144 (77%)
 Frame = +1

Query: 322 EIEKAALFDFNLTLPLIMAEFLFLMFALDKIYYSPLGKFMDERDASIKESLNSVKDTSSE 501
           EIEKA+LFDFNLTLP+IMAEFLFLMFALDKIYY+PLG FMD+RDASIKE L+ VKDTSSE
Sbjct: 77  EIEKASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSE 136

Query: 502 VKQLEDEATAIMRAARAEISAALNQMKKETSVEVEAKLAQGRXXXXXXXXXXXXXXXXXX 681
           VKQLE++A A+MRAARAEISAALN   K    EVEAKLA+GR                  
Sbjct: 137 VKQLEEQANAVMRAARAEISAALNTQLKMKKEEVEAKLAEGRKKIEVELQEALGSLEQQK 196

Query: 682 XXTIKSLDSQISALSQDIVNKVLP 753
             TIKSLDSQISALS DIV KVLP
Sbjct: 197 EDTIKSLDSQISALSDDIVKKVLP 220


>ref|NP_194953.1| F-type H+-transporting ATPase subunit b [Arabidopsis thaliana]
           gi|2864617|emb|CAA16964.1| H+-transporting ATP synthase
           chain9 - like protein [Arabidopsis thaliana]
           gi|5730141|emb|CAB52473.1| ATP synthase beta chain
           precursor (subunit II) [Arabidopsis thaliana]
           gi|7270130|emb|CAB79944.1| H+-transporting ATP synthase
           chain 9-like protein [Arabidopsis thaliana]
           gi|16604406|gb|AAL24209.1| AT4g32260/F10M6_100
           [Arabidopsis thaliana] gi|21554175|gb|AAM63254.1|
           H+-transporting ATP synthase chain 9-like protein
           [Arabidopsis thaliana] gi|332660627|gb|AEE86027.1|
           F-type H+-transporting ATPase subunit b [Arabidopsis
           thaliana]
          Length = 219

 Score =  186 bits (473), Expect = 5e-45
 Identities = 97/143 (67%), Positives = 114/143 (79%)
 Frame = +1

Query: 325 IEKAALFDFNLTLPLIMAEFLFLMFALDKIYYSPLGKFMDERDASIKESLNSVKDTSSEV 504
           +EKA LFDFNLTLP+I+ EFLFLMFALDK+YYSPLG FMD+RDASIKE L SVKDTS+EV
Sbjct: 76  MEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSPLGNFMDQRDASIKEKLASVKDTSTEV 135

Query: 505 KQLEDEATAIMRAARAEISAALNQMKKETSVEVEAKLAQGRXXXXXXXXXXXXXXXXXXX 684
           K+L+++A A+MRAARAEI+AALN+MKKET VEVE KLA+GR                   
Sbjct: 136 KELDEQAAAVMRAARAEIAAALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLESQKE 195

Query: 685 XTIKSLDSQISALSQDIVNKVLP 753
            TIK+LDSQI+ALS+DIV KVLP
Sbjct: 196 ETIKALDSQIAALSEDIVKKVLP 218


Top