BLASTX nr result

ID: Coptis24_contig00000571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000571
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 h...   142   1e-31
gb|ADV04053.1| eukaryotic translation initiation factor 2 [Hevea...   139   7e-31
ref|XP_002280157.1| PREDICTED: protein translation factor SUI1 h...   139   7e-31
gb|AFC01199.1| eukaryotic translation initiation factor [Ammopip...   139   1e-30
ref|XP_004144489.1| PREDICTED: protein translation factor SUI1 h...   136   7e-30

>ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 homolog [Cucumis
           sativus]
          Length = 177

 Score =  142 bits (357), Expect = 1e-31
 Identities = 91/192 (47%), Positives = 106/192 (55%), Gaps = 2/192 (1%)
 Frame = -2

Query: 835 GFFSYI--SFLVLRIFPI*GFYFPLPFFEILISDQL*ALKAREKGLHPSVVTFITICRPR 662
           GFFS+   SFL+L +F     ++      +     L  L  R +      V++    +P 
Sbjct: 6   GFFSFFLFSFLLLLVFIPLFCFWDRTTRSVCFLGVLEQLNLRAQSFCWLPVSYSG--QPS 63

Query: 661 FMSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIXXXXXXXXXXXXXXXXXXXXXXXX 482
           FMSE +VQIP+ FDPFA+ANAEDSGAG+KEYVHVRI                        
Sbjct: 64  FMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSPTTVQGLKKEFSYNKI 123

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 302
                                   EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG
Sbjct: 124 LKDLKK------------------EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 165

Query: 301 IVKKESIKIHGF 266
           IVKKE+IKIHGF
Sbjct: 166 IVKKENIKIHGF 177


>gb|ADV04053.1| eukaryotic translation initiation factor 2 [Hevea brasiliensis]
          Length = 113

 Score =  139 bits (351), Expect = 7e-31
 Identities = 77/131 (58%), Positives = 82/131 (62%)
 Frame = -2

Query: 658 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIXXXXXXXXXXXXXXXXXXXXXXXXX 479
           MSEL+ QIPTTFDPFA+ANAEDSGAG+KEYVH+RI                         
Sbjct: 1   MSELETQIPTTFDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 478 XXXXXXXXXXXXXXXXXXXXXXXEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 299
                                  EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI
Sbjct: 61  KDLKK------------------EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 102

Query: 298 VKKESIKIHGF 266
           VKKE+IKIHGF
Sbjct: 103 VKKENIKIHGF 113


>ref|XP_002280157.1| PREDICTED: protein translation factor SUI1 homolog 1 isoform 2
           [Vitis vinifera] gi|359485573|ref|XP_003633291.1|
           PREDICTED: protein translation factor SUI1 homolog 1
           [Vitis vinifera] gi|297739300|emb|CBI28951.3| unnamed
           protein product [Vitis vinifera]
          Length = 113

 Score =  139 bits (351), Expect = 7e-31
 Identities = 78/131 (59%), Positives = 81/131 (61%)
 Frame = -2

Query: 658 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIXXXXXXXXXXXXXXXXXXXXXXXXX 479
           MSELD  IPTTFDPFA+ANAEDSGAG+KEYVHVRI                         
Sbjct: 1   MSELDANIPTTFDPFADANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 478 XXXXXXXXXXXXXXXXXXXXXXXEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 299
                                  EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI
Sbjct: 61  KDLKK------------------EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 102

Query: 298 VKKESIKIHGF 266
           VKKE+IKIHGF
Sbjct: 103 VKKENIKIHGF 113


>gb|AFC01199.1| eukaryotic translation initiation factor [Ammopiptanthus
           mongolicus]
          Length = 113

 Score =  139 bits (349), Expect = 1e-30
 Identities = 77/131 (58%), Positives = 80/131 (61%)
 Frame = -2

Query: 658 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIXXXXXXXXXXXXXXXXXXXXXXXXX 479
           MSE D  IPTTFDPFAEANAEDSGAG+KEYVHVR+                         
Sbjct: 1   MSEFDTNIPTTFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 478 XXXXXXXXXXXXXXXXXXXXXXXEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 299
                                  EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI
Sbjct: 61  KDLKK------------------EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 102

Query: 298 VKKESIKIHGF 266
           VKKE+IKIHGF
Sbjct: 103 VKKENIKIHGF 113


>ref|XP_004144489.1| PREDICTED: protein translation factor SUI1 homolog 2-like isoform 1
           [Cucumis sativus] gi|449453490|ref|XP_004144490.1|
           PREDICTED: protein translation factor SUI1 homolog
           2-like isoform 2 [Cucumis sativus]
          Length = 113

 Score =  136 bits (342), Expect = 7e-30
 Identities = 76/131 (58%), Positives = 81/131 (61%)
 Frame = -2

Query: 658 MSELDVQIPTTFDPFAEANAEDSGAGSKEYVHVRIXXXXXXXXXXXXXXXXXXXXXXXXX 479
           MSE +VQIP+ FDPFA+ANAEDSGAG+KEYVHVRI                         
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 478 XXXXXXXXXXXXXXXXXXXXXXXEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 299
                                  EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI
Sbjct: 61  KDLKK------------------EFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 102

Query: 298 VKKESIKIHGF 266
           VKKE+IKIHGF
Sbjct: 103 VKKENIKIHGF 113


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